RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 SCAPERQ9BY12 1400 aa19.12■□□□□ 0.65
CTNNA1-205ENST00000517904 MLECQ14165 292 aa19.12■□□□□ 0.65
CTNNA1-205ENST00000517904 PLCH2O75038 1416 aa19.11■□□□□ 0.65
CTNNA1-205ENST00000517904 ARHGEF12Q9NZN5 1544 aa19.08■□□□□ 0.64
CTNNA1-205ENST00000517904 CERKQ8TCT0 537 aa19.07■□□□□ 0.64
CTNNA1-205ENST00000517904 ATP10AO60312 1499 aa19.06■□□□□ 0.64
CTNNA1-205ENST00000517904 C9orf84Q5VXU9 1444 aa19.04■□□□□ 0.64
CTNNA1-205ENST00000517904 MYO5CQ9NQX4 1742 aa19.04■□□□□ 0.64
CTNNA1-205ENST00000517904 PREX1Q8TCU6 1659 aa19.04■□□□□ 0.64
CTNNA1-205ENST00000517904 KIF14Q15058 1648 aa19.02■□□□□ 0.64
CTNNA1-205ENST00000517904 CEBPAP49715 358 aaPredicted RBP19.01■□□□□ 0.63
CTNNA1-205ENST00000517904 EFCAB2Q5VUJ9 269 aa19■□□□□ 0.63
CTNNA1-205ENST00000517904 FMN1Q68DA7 1419 aa18.99■□□□□ 0.63
CTNNA1-205ENST00000517904 KDM5CP41229 1560 aa18.98■□□□□ 0.63
CTNNA1-205ENST00000517904 ZNF518AQ6AHZ1 1483 aa18.98■□□□□ 0.63
CTNNA1-205ENST00000517904 ATP1B4Q9UN42 357 aaPredicted RBP18.98■□□□□ 0.63
CTNNA1-205ENST00000517904 STRCQ7RTU9 1775 aa18.98■□□□□ 0.63
CTNNA1-205ENST00000517904 ARHGAP35Q9NRY4 1499 aa18.97■□□□□ 0.63
CTNNA1-205ENST00000517904 AFAP1Q8N556 730 aa18.96■□□□□ 0.63
CTNNA1-205ENST00000517904 ARHGAP5Q13017 1502 aa18.95■□□□□ 0.62
CTNNA1-205ENST00000517904 EHMT2Q96KQ7 1210 aa18.95■□□□□ 0.62
CTNNA1-205ENST00000517904 DIP2CQ9Y2E4 1556 aa18.94■□□□□ 0.62
CTNNA1-205ENST00000517904 TROQ12816 1431 aaPredicted RBP18.94■□□□□ 0.62
CTNNA1-205ENST00000517904 LRRIQ1Q96JM4 1722 aa18.94■□□□□ 0.62
CTNNA1-205ENST00000517904 CDK11AQ9UQ88 783 aaPredicted RBP18.93■□□□□ 0.62
CTNNA1-205ENST00000517904 UBTFP17480 764 aaKnown RBP18.92■□□□□ 0.62
CTNNA1-205ENST00000517904 ABCA6Q8N139 1617 aa18.92■□□□□ 0.62
CTNNA1-205ENST00000517904 UHRF1BP1Q6BDS2 1440 aa18.91■□□□□ 0.62
CTNNA1-205ENST00000517904 REREQ9P2R6 1566 aa18.91■□□□□ 0.62
CTNNA1-205ENST00000517904 CDC42BPBQ9Y5S2 1711 aa18.91■□□□□ 0.62
CTNNA1-205ENST00000517904 SETD1BQ9UPS6 1966 aaKnown RBP18.9■□□□□ 0.62
CTNNA1-205ENST00000517904 C3P01024 1663 aa18.89■□□□□ 0.61
CTNNA1-205ENST00000517904 DMRT2Q9Y5R5 561 aa18.88■□□□□ 0.61
CTNNA1-205ENST00000517904 CLIP1P30622 1438 aa18.88■□□□□ 0.61
CTNNA1-205ENST00000517904 MLH3Q9UHC1 1453 aa18.88■□□□□ 0.61
CTNNA1-205ENST00000517904 MYT1LQ9UL68 1186 aa18.86■□□□□ 0.61
CTNNA1-205ENST00000517904 PREX2Q70Z35 1606 aa18.85■□□□□ 0.61
CTNNA1-205ENST00000517904 ABCC1P33527 1531 aa18.85■□□□□ 0.61
CTNNA1-205ENST00000517904 TRAPPC8Q9Y2L5 1435 aa18.85■□□□□ 0.61
CTNNA1-205ENST00000517904 ILDR2Q71H61 639 aa18.85■□□□□ 0.61
CTNNA1-205ENST00000517904 AGLP35573 1532 aa18.84■□□□□ 0.61
CTNNA1-205ENST00000517904 DISP3Q9P2K9 1392 aa18.83■□□□□ 0.61
CTNNA1-205ENST00000517904 ITSN2Q9NZM3 1697 aa18.83■□□□□ 0.61
CTNNA1-205ENST00000517904 PTPRTO14522 1441 aa18.83■□□□□ 0.6
CTNNA1-205ENST00000517904 KIDINS220Q9ULH0 1771 aa18.81■□□□□ 0.6
CTNNA1-205ENST00000517904 LTBP4Q8N2S1 1624 aa18.8■□□□□ 0.6
CTNNA1-205ENST00000517904 CDC42BPAQ5VT25 1732 aa18.77■□□□□ 0.6
CTNNA1-205ENST00000517904 CCDC18Q5T9S5 1454 aa18.77■□□□□ 0.59
CTNNA1-205ENST00000517904 NCOA1Q15788 1441 aa18.76■□□□□ 0.59
CTNNA1-205ENST00000517904 CASKIN1Q8WXD9 1431 aa18.76■□□□□ 0.59
CTNNA1-205ENST00000517904 ESF1Q9H501 851 aaKnown RBP18.76■□□□□ 0.59
CTNNA1-205ENST00000517904 CNTLNQ9NXG0 1405 aa18.74■□□□□ 0.59
CTNNA1-205ENST00000517904 SAMD9LQ8IVG5 1584 aa18.74■□□□□ 0.59
CTNNA1-205ENST00000517904 SOCS7O14512 581 aa18.74■□□□□ 0.59
CTNNA1-205ENST00000517904 SPATA31D1Q6ZQQ2 1576 aa18.73■□□□□ 0.59
CTNNA1-205ENST00000517904 MROH2AA6NES4 1674 aa18.72■□□□□ 0.59
CTNNA1-205ENST00000517904 CAMSAP1Q5T5Y3 1602 aa18.71■□□□□ 0.59
CTNNA1-205ENST00000517904 IQSEC2Q5JU85 1478 aa18.71■□□□□ 0.59
CTNNA1-205ENST00000517904 SYCP2Q9BX26 1530 aa18.7■□□□□ 0.58
CTNNA1-205ENST00000517904 NPATQ14207 1427 aa18.7■□□□□ 0.58
CTNNA1-205ENST00000517904 ZMYM3Q14202 1370 aa18.68■□□□□ 0.58
CTNNA1-205ENST00000517904 ZNF777Q9ULD5 760 aaPredicted RBP18.68■□□□□ 0.58
CTNNA1-205ENST00000517904 SUPT6HQ7KZ85 1726 aaKnown RBP18.68■□□□□ 0.58
CTNNA1-205ENST00000517904 FYCO1Q9BQS8 1478 aa18.67■□□□□ 0.58
CTNNA1-205ENST00000517904 GPATCH8Q9UKJ3 1502 aaKnown RBP18.67■□□□□ 0.58
CTNNA1-205ENST00000517904 PLXNC1O60486 1568 aa18.65■□□□□ 0.58
CTNNA1-205ENST00000517904 HNRNPMP52272 730 aaKnown RBP eCLIP18.65■□□□□ 0.58
CTNNA1-205ENST00000517904 CLTCQ00610 1675 aaKnown RBP18.65■□□□□ 0.58
CTNNA1-205ENST00000517904 SPAG9O60271 1321 aaKnown RBP18.65■□□□□ 0.58
CTNNA1-205ENST00000517904 ATP7AQ04656 1500 aa18.64■□□□□ 0.58
CTNNA1-205ENST00000517904 INO80Q9ULG1 1556 aaPredicted RBP18.64■□□□□ 0.58
CTNNA1-205ENST00000517904 MYO3AQ8NEV4 1616 aa18.64■□□□□ 0.57
CTNNA1-205ENST00000517904 NCKAP5LQ9HCH0 1330 aa18.64■□□□□ 0.57
CTNNA1-205ENST00000517904 ZNF142P52746 1687 aaPredicted RBP18.63■□□□□ 0.57
CTNNA1-205ENST00000517904 ZNF335Q9H4Z2 1342 aaPredicted RBP18.63■□□□□ 0.57
CTNNA1-205ENST00000517904 PTPRKQ15262 1439 aa18.61■□□□□ 0.57
CTNNA1-205ENST00000517904 CEP170BQ9Y4F5 1589 aaPredicted RBP18.6■□□□□ 0.57
CTNNA1-205ENST00000517904 A2MP01023 1474 aa18.6■□□□□ 0.57
CTNNA1-205ENST00000517904 PLA2R1Q13018 1463 aa18.6■□□□□ 0.57
CTNNA1-205ENST00000517904 KIAA1107Q9UPP5 1409 aa18.6■□□□□ 0.57
CTNNA1-205ENST00000517904 TCOF1Q13428 1488 aaKnown RBP18.59■□□□□ 0.57
CTNNA1-205ENST00000517904 CFDP1Q9UEE9 299 aaPredicted RBP18.57■□□□□ 0.56
CTNNA1-205ENST00000517904 PLEKHH2Q8IVE3 1493 aa18.57■□□□□ 0.56
CTNNA1-205ENST00000517904 UBAP1LF5GYI3 381 aa18.56■□□□□ 0.56
CTNNA1-205ENST00000517904 GGT6Q6P531 493 aa18.56■□□□□ 0.56
CTNNA1-205ENST00000517904 PKD2Q13563 968 aa18.55■□□□□ 0.56
CTNNA1-205ENST00000517904 CCNB3Q8WWL7 1395 aa18.55■□□□□ 0.56
CTNNA1-205ENST00000517904 ADGBQ8N7X0 1667 aa18.54■□□□□ 0.56
CTNNA1-205ENST00000517904 ZNF644Q9H582 1327 aaPredicted RBP18.51■□□□□ 0.55
CTNNA1-205ENST00000517904 DNMT1P26358 1616 aaKnown RBP18.5■□□□□ 0.55
CTNNA1-205ENST00000517904 PPP6R1Q9UPN7 881 aa18.5■□□□□ 0.55
CTNNA1-205ENST00000517904 A2ML1A8K2U0 1454 aa18.5■□□□□ 0.55
CTNNA1-205ENST00000517904 MBD5Q9P267 1494 aa18.5■□□□□ 0.55
CTNNA1-205ENST00000517904 TIAM1Q13009 1591 aa18.5■□□□□ 0.55
CTNNA1-205ENST00000517904 MTUS2Q5JR59 1369 aa18.49■□□□□ 0.55
CTNNA1-205ENST00000517904 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
CTNNA1-205ENST00000517904 NEURL4Q96JN8 1562 aa18.46■□□□□ 0.55
CTNNA1-205ENST00000517904 RTEL1-TNFRSF6BF6WH68 1400 aa18.45■□□□□ 0.54
CTNNA1-205ENST00000517904 POLR1AO95602 1720 aaPredicted RBP18.45■□□□□ 0.54
CTNNA1-205ENST00000517904 DHX29Q7Z478 1369 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms