RNA–Protein interactions for RNA: ENST00000517671.5

NPM1-204, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-204ENST00000517671 HS6ST3Q8IZP7 471 aa14.92□□□□□ -0.02
NPM1-204ENST00000517671 MRC2Q9UBG0 1479 aa14.91□□□□□ -0.02
NPM1-204ENST00000517671 CABP2Q9NPB3 220 aa14.91□□□□□ -0.02
NPM1-204ENST00000517671 MROH2BQ7Z745 1585 aa14.9□□□□□ -0.02
NPM1-204ENST00000517671 MKRN3Q13064 507 aaKnown RBP14.88□□□□□ -0.03
NPM1-204ENST00000517671 WDR62O43379 1518 aa14.84□□□□□ -0.03
NPM1-204ENST00000517671 KIF21AQ7Z4S6 1674 aa14.82□□□□□ -0.04
NPM1-204ENST00000517671 EFCAB3Q8N7B9 438 aa14.81□□□□□ -0.04
NPM1-204ENST00000517671 CEP164Q9UPV0 1460 aa14.81□□□□□ -0.04
NPM1-204ENST00000517671 BBXQ8WY36 941 aaPredicted RBP14.8□□□□□ -0.04
NPM1-204ENST00000517671 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.78□□□□□ -0.04
NPM1-204ENST00000517671 SOX12O15370 315 aa14.77□□□□□ -0.04
NPM1-204ENST00000517671 FANCD2Q9BXW9 1451 aa14.76□□□□□ -0.05
NPM1-204ENST00000517671 PLCG2P16885 1265 aa14.75□□□□□ -0.05
NPM1-204ENST00000517671 SLAIN1Q8ND83 568 aa14.75□□□□□ -0.05
NPM1-204ENST00000517671 CFTRP13569 1480 aa14.74□□□□□ -0.05
NPM1-204ENST00000517671 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.72□□□□□ -0.052e-17■■■□□ 16.1
NPM1-204ENST00000517671 IRX5P78411 483 aaPredicted RBP14.71□□□□□ -0.05
NPM1-204ENST00000517671 NLRP6P59044 892 aa14.7□□□□□ -0.06
NPM1-204ENST00000517671 RYDENQ9NUL5 291 aaKnown RBP14.7□□□□□ -0.06
NPM1-204ENST00000517671 CDAN1Q8IWY9 1227 aa14.68□□□□□ -0.06
NPM1-204ENST00000517671 OCEL1Q9H607 264 aa14.67□□□□□ -0.06
NPM1-204ENST00000517671 PHF8Q9UPP1 1060 aa14.66□□□□□ -0.06
NPM1-204ENST00000517671 ST18O60284 1047 aa14.66□□□□□ -0.06
NPM1-204ENST00000517671 NKX1-1Q15270 411 aaPredicted RBP14.66□□□□□ -0.06
NPM1-204ENST00000517671 MFRPQ9BY79 579 aa14.65□□□□□ -0.06
NPM1-204ENST00000517671 WIZO95785 1651 aa14.63□□□□□ -0.07
NPM1-204ENST00000517671 SPRYD3Q8NCJ5 442 aa14.63□□□□□ -0.07
NPM1-204ENST00000517671 PAXIP1Q6ZW49 1069 aaPredicted RBP14.61□□□□□ -0.07
NPM1-204ENST00000517671 RSF1Q96T23 1441 aaPredicted RBP14.6□□□□□ -0.07
NPM1-204ENST00000517671 CFAP44Q96MT7 982 aa14.6□□□□□ -0.07
NPM1-204ENST00000517671 FBXO22Q8NEZ5 403 aa14.58□□□□□ -0.08
NPM1-204ENST00000517671 URB2Q14146 1524 aaKnown RBP14.57□□□□□ -0.08
NPM1-204ENST00000517671 ILDR1Q86SU0 546 aaPredicted RBP14.57□□□□□ -0.08
NPM1-204ENST00000517671 IFT140Q96RY7 1462 aa14.56□□□□□ -0.08
NPM1-204ENST00000517671 G3V3G9 751 aa14.56□□□□□ -0.08
NPM1-204ENST00000517671 GTPBP6O43824 516 aaPredicted RBP14.56□□□□□ -0.08
NPM1-204ENST00000517671 TOP2AP11388 1531 aaKnown RBP14.55□□□□□ -0.08
NPM1-204ENST00000517671 ABCC8Q09428 1581 aa14.55□□□□□ -0.08
NPM1-204ENST00000517671 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.54□□□□□ -0.08
NPM1-204ENST00000517671 PDCD7Q8N8D1 485 aaKnown RBP14.53□□□□□ -0.08
NPM1-204ENST00000517671 L3MBTL3Q96JM7 780 aaPredicted RBP14.53□□□□□ -0.08
NPM1-204ENST00000517671 MS4A4AQ96JQ5 239 aa14.52□□□□□ -0.08
NPM1-204ENST00000517671 DPY19L2Q6NUT2 758 aa14.51□□□□□ -0.09
NPM1-204ENST00000517671 SNPHO15079 494 aa14.49□□□□□ -0.09
NPM1-204ENST00000517671 TMEM121BQ9BXQ6 578 aaPredicted RBP14.48□□□□□ -0.09
NPM1-204ENST00000517671 PLCB2Q00722 1185 aa14.47□□□□□ -0.09
NPM1-204ENST00000517671 CYB5RLQ6IPT4 315 aa14.46□□□□□ -0.09
NPM1-204ENST00000517671 BOLA1Q9Y3E2 137 aa14.45□□□□□ -0.1
NPM1-204ENST00000517671 RIMBP3CA6NJZ7 1639 aa14.44□□□□□ -0.1
NPM1-204ENST00000517671 RIMBP3BA6NNM3 1639 aa14.44□□□□□ -0.1
NPM1-204ENST00000517671 RIMBP3Q9UFD9 1639 aa14.44□□□□□ -0.1
NPM1-204ENST00000517671 PPP1R37O75864 691 aa14.43□□□□□ -0.1
NPM1-204ENST00000517671 ARHGEF11O15085 1522 aa14.43□□□□□ -0.1
NPM1-204ENST00000517671 ZNF608Q9ULD9 1512 aaPredicted RBP14.42□□□□□ -0.1
NPM1-204ENST00000517671 CCDC88BA6NC98 1476 aa14.41□□□□□ -0.1
NPM1-204ENST00000517671 TOPBP1Q92547 1522 aa14.41□□□□□ -0.1
NPM1-204ENST00000517671 C3orf67Q6ZVT6 689 aa14.39□□□□□ -0.11
NPM1-204ENST00000517671 MARVELD3Q96A59 401 aa14.38□□□□□ -0.11
NPM1-204ENST00000517671 MICALL2Q8IY33 904 aa14.37□□□□□ -0.11
NPM1-204ENST00000517671 DNMBPQ6XZF7 1577 aa14.33□□□□□ -0.11
NPM1-204ENST00000517671 PRDM2Q13029 1718 aa14.33□□□□□ -0.12
NPM1-204ENST00000517671 SPNS2Q8IVW8 549 aa14.33□□□□□ -0.12
NPM1-204ENST00000517671 AQRO60306 1485 aaKnown RBP eCLIP14.32□□□□□ -0.122e-9■■■■□ 24.5
NPM1-204ENST00000517671 HAP1P54257 671 aaPredicted RBP14.32□□□□□ -0.12
NPM1-204ENST00000517671 MMRN1Q13201 1228 aa14.31□□□□□ -0.12
NPM1-204ENST00000517671 CHMP7Q8WUX9 453 aaPredicted RBP14.29□□□□□ -0.12
NPM1-204ENST00000517671 EIF4G3O43432 1585 aaKnown RBP14.29□□□□□ -0.12
NPM1-204ENST00000517671 SOGA1O94964 1423 aa14.27□□□□□ -0.12
NPM1-204ENST00000517671 EMP3P54852 163 aa14.25□□□□□ -0.13
NPM1-204ENST00000517671 POLA1P09884 1462 aaPredicted RBP14.25□□□□□ -0.13
NPM1-204ENST00000517671 ARAP1Q96P48 1450 aa14.25□□□□□ -0.13
NPM1-204ENST00000517671 TSHZ2Q9NRE2 1034 aa14.24□□□□□ -0.13
NPM1-204ENST00000517671 TARBP1Q13395 1621 aaKnown RBP14.24□□□□□ -0.13
NPM1-204ENST00000517671 WDR97A6NE52 1622 aa14.23□□□□□ -0.13
NPM1-204ENST00000517671 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
NPM1-204ENST00000517671 TMC2Q8TDI7 906 aa14.22□□□□□ -0.13
NPM1-204ENST00000517671 PDE4AP27815 886 aa14.21□□□□□ -0.13
NPM1-204ENST00000517671 MAGI1Q96QZ7 1491 aaPredicted RBP14.2□□□□□ -0.14
NPM1-204ENST00000517671 GRIN2BQ13224 1484 aa14.17□□□□□ -0.14
NPM1-204ENST00000517671 RAD54L2Q9Y4B4 1467 aa14.17□□□□□ -0.14
NPM1-204ENST00000517671 CADPS2Q86UW7 1296 aa14.16□□□□□ -0.14
NPM1-204ENST00000517671 HS3ST6Q96QI5 342 aa14.16□□□□□ -0.14
NPM1-204ENST00000517671 SYNJ1O43426 1573 aa14.16□□□□□ -0.14
NPM1-204ENST00000517671 POTEB3A0JP26 581 aa14.15□□□□□ -0.14
NPM1-204ENST00000517671 FAM205CA6NFA0 338 aa14.15□□□□□ -0.14
NPM1-204ENST00000517671 POTEBQ6S5H4 581 aa14.15□□□□□ -0.14
NPM1-204ENST00000517671 SNAPC4Q5SXM2 1469 aa14.15□□□□□ -0.14
NPM1-204ENST00000517671 CHD1O14646 1710 aa14.15□□□□□ -0.14
NPM1-204ENST00000517671 SYNJ2O15056 1496 aa14.14□□□□□ -0.15
NPM1-204ENST00000517671 GPHNQ9NQX3 736 aaPredicted RBP14.14□□□□□ -0.15
NPM1-204ENST00000517671 WDR70Q9NW82 654 aa14.14□□□□□ -0.15
NPM1-204ENST00000517671 C2orf72A6NCS6 295 aa14.13□□□□□ -0.15
NPM1-204ENST00000517671 LARP6Q9BRS8 491 aaKnown RBP14.13□□□□□ -0.15
NPM1-204ENST00000517671 CLASP1Q7Z460 1538 aa14.12□□□□□ -0.15
NPM1-204ENST00000517671 TMEM92Q6UXU6 159 aa14.12□□□□□ -0.15
NPM1-204ENST00000517671 KRTAP3-3Q9BYR6 98 aa14.12□□□□□ -0.15
NPM1-204ENST00000517671 KRTAP3-2Q9BYR7 98 aa14.12□□□□□ -0.15
NPM1-204ENST00000517671 CRISPLD2Q9H0B8 497 aa14.12□□□□□ -0.15
NPM1-204ENST00000517671 FGD5Q6ZNL6 1462 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms