RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 MFAP1P55081 439 aaKnown RBP10.52□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 GPIHBP1Q8IV16 184 aa10.52□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 CLUAP1Q96AJ1 413 aa10.5□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 FAM117AQ9C073 453 aa10.5□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 CHMP4AQ9BY43 222 aa10.49□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 FXR2P51116 673 aaKnown RBP eCLIP10.48□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 FOXD4L5Q5VV16 416 aaPredicted RBP10.48□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 FOXD4L4Q8WXT5 416 aaPredicted RBP10.48□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 CCDC97Q96F63 343 aaPredicted RBP10.48□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 DDRGK1Q96HY6 314 aa10.48□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 GZF1Q9H116 711 aaPredicted RBP10.48□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 OSCARQ8IYS5 282 aa10.47□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 SERPINA10Q9UK55 444 aa10.46□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 E9PSI1 815 aa10.45□□□□□ -0.74
RNU6ATAC39P-201ENST00000516309 AKT1S1Q96B36 256 aa10.45□□□□□ -0.74
RNU6ATAC39P-201ENST00000516309 ONECUT3O60422 494 aaPredicted RBP10.44□□□□□ -0.74
RNU6ATAC39P-201ENST00000516309 REM2Q8IYK8 340 aaPredicted RBP10.43□□□□□ -0.74
RNU6ATAC39P-201ENST00000516309 RBM26Q5T8P6 1007 aaKnown RBP10.42□□□□□ -0.74
RNU6ATAC39P-201ENST00000516309 ZNF428Q96B54 188 aa10.42□□□□□ -0.74
RNU6ATAC39P-201ENST00000516309 PLEKHG3A1L390 1219 aa10.41□□□□□ -0.74
RNU6ATAC39P-201ENST00000516309 FBXW7Q969H0 707 aa10.4□□□□□ -0.74
RNU6ATAC39P-201ENST00000516309 ZNF777Q9ULD5 760 aaPredicted RBP10.4□□□□□ -0.74
RNU6ATAC39P-201ENST00000516309 RETREG2Q8NC44 543 aa10.38□□□□□ -0.75
RNU6ATAC39P-201ENST00000516309 PYGBP11216 843 aa10.37□□□□□ -0.75
RNU6ATAC39P-201ENST00000516309 PROSER2Q86WR7 435 aaPredicted RBP10.37□□□□□ -0.75
RNU6ATAC39P-201ENST00000516309 GOPCQ9HD26 462 aa10.37□□□□□ -0.75
RNU6ATAC39P-201ENST00000516309 ARIH1Q9Y4X5 557 aaPredicted RBP10.37□□□□□ -0.75
RNU6ATAC39P-201ENST00000516309 PITPNM1O00562 1244 aa10.35□□□□□ -0.75
RNU6ATAC39P-201ENST00000516309 PATL2C9JE40 543 aaKnown RBP10.33□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 MFRPQ9BY79 579 aa10.33□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 GABBR2O75899 941 aa10.32□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 PCMTD1Q96MG8 357 aaPredicted RBP10.32□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 PDE4CQ08493 712 aa10.31□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 MCM6Q14566 821 aa10.31□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 USP35Q9P2H5 1018 aa10.31□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 IRF5Q13568 498 aa10.3□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 LARP6Q9BRS8 491 aaKnown RBP10.3□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 MLLT3P42568 568 aaPredicted RBP10.29□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 RSPH4AQ5TD94 716 aa10.29□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 RASEFQ8IZ41 740 aa10.29□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 BRD2P25440 801 aaKnown RBP10.28□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 PDE4AP27815 886 aa10.28□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 PPP1R37O75864 691 aa10.27□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 ZNF467Q7Z7K2 595 aaPredicted RBP10.27□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 PDAP1Q13442 181 aaKnown RBP10.26□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 MINK1Q8N4C8 1332 aaPredicted RBP10.26□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 FNBP4Q8N3X1 1017 aaPredicted RBP10.25□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 NCKAP5LQ9HCH0 1330 aa10.25□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 MFSD10Q14728 455 aa10.24□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 AMHR2Q16671 573 aa10.24□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 PARP9Q8IXQ6 854 aa10.24□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 DDX27Q96GQ7 796 aaKnown RBP10.23□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 PPP1R15AO75807 674 aaPredicted RBP10.22□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 POLR3GLQ9BT43 218 aa10.22□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 AMOTL2Q9Y2J4 779 aa10.22□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 ACIN1Q9UKV3 1341 aaKnown RBP10.22□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 CCDC102AQ96A19 550 aa10.21□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 MYT1LQ9UL68 1186 aa10.21□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 POTEIP0CG38 1075 aa10.2□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 NLRP6P59044 892 aa10.2□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 CAMK2BQ13554 666 aa10.2□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 MAP2K5Q13163 448 aa10.19□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 POM121Q96HA1 1249 aa10.19□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 C19orf67A6NJJ6 358 aa10.18□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 KCNA1Q09470 495 aa10.18□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 FAM177A1Q8N128 213 aaPredicted RBP10.18□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 MNX1P50219 401 aaPredicted RBP10.16□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 IRF6O14896 467 aa10.15□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 GPR37O15354 613 aa10.15□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 TTLL12Q14166 644 aaPredicted RBP10.15□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 FBXO22Q8NEZ5 403 aa10.15□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 CRISPLD2Q9H0B8 497 aa10.14□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 CREBZFQ9NS37 354 aa10.14□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 ZNF330Q9Y3S2 320 aaPredicted RBP10.13□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 POTEMA6NI47 508 aa10.12□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 BRD1O95696 1058 aa10.12□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 CCDC27Q2M243 656 aa10.12□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 SH3D19Q5HYK7 790 aa10.12□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 UBE2Q2Q8WVN8 375 aa10.12□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 SOX12O15370 315 aa10.11□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 PSEN1P49768 467 aa10.11□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 DHX37Q8IY37 1157 aaKnown RBP10.1□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 SPDYE16A6NNV3 312 aaPredicted RBP10.08□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 PHF8Q9UPP1 1060 aa10.08□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 COG6Q9Y2V7 657 aa10.08□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 CANXP27824 592 aaKnown RBP10.07□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 GIGYF2Q6Y7W6 1299 aaKnown RBP10.07□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 ATP1B4Q9UN42 357 aaPredicted RBP10.07□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 PCDHB8Q9UN66 801 aa10.07□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 PCDHB13Q9Y5F0 798 aa10.07□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 SPDYE5A6NIY4 337 aa10.06□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 PPM1GO15355 546 aaPredicted RBP10.06□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 EFCAB3Q8N7B9 438 aa10.06□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 NUTM2FA1L443 756 aa10.05□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 MS4A1P11836 297 aa10.05□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 POTEGQ6S5H5 508 aa10.05□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 CCDC125Q86Z20 511 aa10.04□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 FAM9AQ8IZU1 332 aaPredicted RBP10.04□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 USTQ9Y2C2 406 aa10.04□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 GNPATO15228 680 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms