RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 MFAP1P55081 439 aaKnown RBP10.52□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 GPIHBP1Q8IV16 184 aa10.52□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 CLUAP1Q96AJ1 413 aa10.5□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 FAM117AQ9C073 453 aa10.5□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 CHMP4AQ9BY43 222 aa10.49□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 FXR2P51116 673 aaKnown RBP eCLIP10.48□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 FOXD4L5Q5VV16 416 aaPredicted RBP10.48□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 FOXD4L4Q8WXT5 416 aaPredicted RBP10.48□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 CCDC97Q96F63 343 aaPredicted RBP10.48□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 DDRGK1Q96HY6 314 aa10.48□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 GZF1Q9H116 711 aaPredicted RBP10.48□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 OSCARQ8IYS5 282 aa10.47□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 SERPINA10Q9UK55 444 aa10.46□□□□□ -0.73
RNU6ATAC39P-201ENST00000516309 E9PSI1 815 aa10.45□□□□□ -0.74
RNU6ATAC39P-201ENST00000516309 AKT1S1Q96B36 256 aa10.45□□□□□ -0.74
RNU6ATAC39P-201ENST00000516309 ONECUT3O60422 494 aaPredicted RBP10.44□□□□□ -0.74
RNU6ATAC39P-201ENST00000516309 REM2Q8IYK8 340 aaPredicted RBP10.43□□□□□ -0.74
RNU6ATAC39P-201ENST00000516309 RBM26Q5T8P6 1007 aaKnown RBP10.42□□□□□ -0.74
RNU6ATAC39P-201ENST00000516309 ZNF428Q96B54 188 aa10.42□□□□□ -0.74
RNU6ATAC39P-201ENST00000516309 PLEKHG3A1L390 1219 aa10.41□□□□□ -0.74
RNU6ATAC39P-201ENST00000516309 FBXW7Q969H0 707 aa10.4□□□□□ -0.74
RNU6ATAC39P-201ENST00000516309 ZNF777Q9ULD5 760 aaPredicted RBP10.4□□□□□ -0.74
RNU6ATAC39P-201ENST00000516309 RETREG2Q8NC44 543 aa10.38□□□□□ -0.75
RNU6ATAC39P-201ENST00000516309 PYGBP11216 843 aa10.37□□□□□ -0.75
RNU6ATAC39P-201ENST00000516309 PROSER2Q86WR7 435 aaPredicted RBP10.37□□□□□ -0.75
RNU6ATAC39P-201ENST00000516309 GOPCQ9HD26 462 aa10.37□□□□□ -0.75
RNU6ATAC39P-201ENST00000516309 ARIH1Q9Y4X5 557 aaPredicted RBP10.37□□□□□ -0.75
RNU6ATAC39P-201ENST00000516309 PITPNM1O00562 1244 aa10.35□□□□□ -0.75
RNU6ATAC39P-201ENST00000516309 PATL2C9JE40 543 aaKnown RBP10.33□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 MFRPQ9BY79 579 aa10.33□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 GABBR2O75899 941 aa10.32□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 PCMTD1Q96MG8 357 aaPredicted RBP10.32□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 PDE4CQ08493 712 aa10.31□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 MCM6Q14566 821 aa10.31□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 USP35Q9P2H5 1018 aa10.31□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 IRF5Q13568 498 aa10.3□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 LARP6Q9BRS8 491 aaKnown RBP10.3□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 MLLT3P42568 568 aaPredicted RBP10.29□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 RSPH4AQ5TD94 716 aa10.29□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 RASEFQ8IZ41 740 aa10.29□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 BRD2P25440 801 aaKnown RBP10.28□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 PDE4AP27815 886 aa10.28□□□□□ -0.76
RNU6ATAC39P-201ENST00000516309 PPP1R37O75864 691 aa10.27□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 ZNF467Q7Z7K2 595 aaPredicted RBP10.27□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 PDAP1Q13442 181 aaKnown RBP10.26□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 MINK1Q8N4C8 1332 aaPredicted RBP10.26□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 FNBP4Q8N3X1 1017 aaPredicted RBP10.25□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 NCKAP5LQ9HCH0 1330 aa10.25□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 MFSD10Q14728 455 aa10.24□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 AMHR2Q16671 573 aa10.24□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 PARP9Q8IXQ6 854 aa10.24□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 DDX27Q96GQ7 796 aaKnown RBP10.23□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 PPP1R15AO75807 674 aaPredicted RBP10.22□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 POLR3GLQ9BT43 218 aa10.22□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 AMOTL2Q9Y2J4 779 aa10.22□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 ACIN1Q9UKV3 1341 aaKnown RBP10.22□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 CCDC102AQ96A19 550 aa10.21□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 MYT1LQ9UL68 1186 aa10.21□□□□□ -0.77
RNU6ATAC39P-201ENST00000516309 POTEIP0CG38 1075 aa10.2□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 NLRP6P59044 892 aa10.2□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 CAMK2BQ13554 666 aa10.2□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 MAP2K5Q13163 448 aa10.19□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 POM121Q96HA1 1249 aa10.19□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 C19orf67A6NJJ6 358 aa10.18□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 KCNA1Q09470 495 aa10.18□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 FAM177A1Q8N128 213 aaPredicted RBP10.18□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 MNX1P50219 401 aaPredicted RBP10.16□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 IRF6O14896 467 aa10.15□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 GPR37O15354 613 aa10.15□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 TTLL12Q14166 644 aaPredicted RBP10.15□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 FBXO22Q8NEZ5 403 aa10.15□□□□□ -0.78
RNU6ATAC39P-201ENST00000516309 CRISPLD2Q9H0B8 497 aa10.14□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 CREBZFQ9NS37 354 aa10.14□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 ZNF330Q9Y3S2 320 aaPredicted RBP10.13□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 POTEMA6NI47 508 aa10.12□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 BRD1O95696 1058 aa10.12□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 CCDC27Q2M243 656 aa10.12□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 SH3D19Q5HYK7 790 aa10.12□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 UBE2Q2Q8WVN8 375 aa10.12□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 SOX12O15370 315 aa10.11□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 PSEN1P49768 467 aa10.11□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 DHX37Q8IY37 1157 aaKnown RBP10.1□□□□□ -0.79
RNU6ATAC39P-201ENST00000516309 SPDYE16A6NNV3 312 aaPredicted RBP10.08□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 PHF8Q9UPP1 1060 aa10.08□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 COG6Q9Y2V7 657 aa10.08□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 CANXP27824 592 aaKnown RBP10.07□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 GIGYF2Q6Y7W6 1299 aaKnown RBP10.07□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 ATP1B4Q9UN42 357 aaPredicted RBP10.07□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 PCDHB8Q9UN66 801 aa10.07□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 PCDHB13Q9Y5F0 798 aa10.07□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 SPDYE5A6NIY4 337 aa10.06□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 PPM1GO15355 546 aaPredicted RBP10.06□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 EFCAB3Q8N7B9 438 aa10.06□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 NUTM2FA1L443 756 aa10.05□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 MS4A1P11836 297 aa10.05□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 POTEGQ6S5H5 508 aa10.05□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 CCDC125Q86Z20 511 aa10.04□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 FAM9AQ8IZU1 332 aaPredicted RBP10.04□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 USTQ9Y2C2 406 aa10.04□□□□□ -0.8
RNU6ATAC39P-201ENST00000516309 GNPATO15228 680 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms