RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 ARIH1Q9Y4X5 557 aaPredicted RBP15.2■□□□□ 0.02
LDHBP3-201ENST00000514909 SEMA3EO15041 775 aa15.19■□□□□ 0.02
LDHBP3-201ENST00000514909 C14orf37Q86TY3 774 aa15.19■□□□□ 0.02
LDHBP3-201ENST00000514909 MFSD10Q14728 455 aa15.17■□□□□ 0.02
LDHBP3-201ENST00000514909 SMYD5Q6GMV2 418 aa15.16■□□□□ 0.02
LDHBP3-201ENST00000514909 MAMSTRQ6ZN01 415 aa15.16■□□□□ 0.02
LDHBP3-201ENST00000514909 NCKAP5LQ9HCH0 1330 aa15.16■□□□□ 0.02
LDHBP3-201ENST00000514909 COLQQ9Y215 455 aaPredicted RBP15.15■□□□□ 0.02
LDHBP3-201ENST00000514909 PDE4AP27815 886 aa15.14■□□□□ 0.01
LDHBP3-201ENST00000514909 NEUROD2Q15784 382 aa15.11■□□□□ 0.01
LDHBP3-201ENST00000514909 CRISPLD2Q9H0B8 497 aa15.11■□□□□ 0.01
LDHBP3-201ENST00000514909 SLC24A3Q9HC58 644 aa15.11■□□□□ 0.01
LDHBP3-201ENST00000514909 POTEMA6NI47 508 aa15.1■□□□□ 0.01
LDHBP3-201ENST00000514909 ZMYND10O75800 440 aa15.1■□□□□ 0.01
LDHBP3-201ENST00000514909 TRIM35Q9UPQ4 493 aa15.1■□□□□ 0.01
LDHBP3-201ENST00000514909 LARP6Q9BRS8 491 aaKnown RBP15.08■□□□□ 0
LDHBP3-201ENST00000514909 LCE2DQ5TA82 110 aaPredicted RBP15.07■□□□□ 0
LDHBP3-201ENST00000514909 POTEGQ6S5H5 508 aa15.07■□□□□ 0
LDHBP3-201ENST00000514909 SCUBE2Q9NQ36 999 aa15.07■□□□□ 0
LDHBP3-201ENST00000514909 CAMK2BQ13554 666 aa15.06■□□□□ 0
LDHBP3-201ENST00000514909 MS4A4AQ96JQ5 239 aa15.06■□□□□ 0
LDHBP3-201ENST00000514909 IER5LQ5T953 404 aa15.05■□□□□ -0
LDHBP3-201ENST00000514909 DDX27Q96GQ7 796 aaKnown RBP15.05■□□□□ -0
LDHBP3-201ENST00000514909 PLSCR2Q9NRY7 297 aa15.03■□□□□ -0
LDHBP3-201ENST00000514909 SEC24BO95487 1268 aa15.01□□□□□ -0.01
LDHBP3-201ENST00000514909 TMEM106CQ9BVX2 250 aa15.01□□□□□ -0.01
LDHBP3-201ENST00000514909 BARGINQ6ZT62 677 aa15□□□□□ -0.01
LDHBP3-201ENST00000514909 DAXXQ9UER7 740 aaPredicted RBP14.96□□□□□ -0.01
LDHBP3-201ENST00000514909 HOMEZQ8IX15 550 aa14.94□□□□□ -0.02
LDHBP3-201ENST00000514909 GOLGA2Q08379 1002 aa14.93□□□□□ -0.02
LDHBP3-201ENST00000514909 FAM163AQ96GL9 167 aaPredicted RBP14.92□□□□□ -0.02
LDHBP3-201ENST00000514909 IRX5P78411 483 aaPredicted RBP14.9□□□□□ -0.02
LDHBP3-201ENST00000514909 AK7Q96M32 723 aa14.9□□□□□ -0.02
LDHBP3-201ENST00000514909 GPIHBP1Q8IV16 184 aa14.86□□□□□ -0.03
LDHBP3-201ENST00000514909 MKRN3Q13064 507 aaKnown RBP14.85□□□□□ -0.03
LDHBP3-201ENST00000514909 PLCG2P16885 1265 aa14.84□□□□□ -0.03
LDHBP3-201ENST00000514909 PPP1R15BQ5SWA1 713 aa14.84□□□□□ -0.03
LDHBP3-201ENST00000514909 ILDR1Q86SU0 546 aaPredicted RBP14.84□□□□□ -0.03
LDHBP3-201ENST00000514909 GPHNQ9NQX3 736 aaPredicted RBP14.83□□□□□ -0.04
LDHBP3-201ENST00000514909 PCDH10Q9P2E7 1040 aa14.83□□□□□ -0.04
LDHBP3-201ENST00000514909 MLLT3P42568 568 aaPredicted RBP14.81□□□□□ -0.04
LDHBP3-201ENST00000514909 RBM26Q5T8P6 1007 aaKnown RBP14.81□□□□□ -0.04
LDHBP3-201ENST00000514909 SPDYE16A6NNV3 312 aaPredicted RBP14.79□□□□□ -0.04
LDHBP3-201ENST00000514909 OCEL1Q9H607 264 aa14.78□□□□□ -0.04
LDHBP3-201ENST00000514909 PDIA6Q15084 440 aa14.77□□□□□ -0.05
LDHBP3-201ENST00000514909 SLAIN1Q8ND83 568 aa14.77□□□□□ -0.05
LDHBP3-201ENST00000514909 KRI1Q8N9T8 703 aaKnown RBP14.75□□□□□ -0.05
LDHBP3-201ENST00000514909 GPBP1L1Q9HC44 474 aaPredicted RBP14.73□□□□□ -0.05
LDHBP3-201ENST00000514909 KDM4CQ9H3R0 1056 aa14.71□□□□□ -0.05
LDHBP3-201ENST00000514909 EMILIN3Q9NT22 766 aa14.71□□□□□ -0.05
LDHBP3-201ENST00000514909 DPYSL4O14531 572 aa14.7□□□□□ -0.06
LDHBP3-201ENST00000514909 TRIM66O15016 1216 aa14.7□□□□□ -0.06
LDHBP3-201ENST00000514909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.7□□□□□ -0.06
LDHBP3-201ENST00000514909 PDCD7Q8N8D1 485 aaKnown RBP14.69□□□□□ -0.06
LDHBP3-201ENST00000514909 PDE4DQ08499 809 aa14.68□□□□□ -0.06
LDHBP3-201ENST00000514909 SUPT5HO00267 1087 aaKnown RBP14.67□□□□□ -0.06
LDHBP3-201ENST00000514909 ST18O60284 1047 aa14.67□□□□□ -0.06
LDHBP3-201ENST00000514909 GPR37O15354 613 aa14.65□□□□□ -0.06
LDHBP3-201ENST00000514909 FOXK1P85037 733 aa14.65□□□□□ -0.06
LDHBP3-201ENST00000514909 DSG2Q14126 1118 aa14.65□□□□□ -0.06
LDHBP3-201ENST00000514909 IL27Q8NEV9 243 aa14.63□□□□□ -0.07
LDHBP3-201ENST00000514909 MICALL2Q8IY33 904 aa14.6□□□□□ -0.07
LDHBP3-201ENST00000514909 TMC2Q8TDI7 906 aa14.6□□□□□ -0.07
LDHBP3-201ENST00000514909 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.58□□□□□ -0.08
LDHBP3-201ENST00000514909 MINK1Q8N4C8 1332 aaPredicted RBP14.58□□□□□ -0.08
LDHBP3-201ENST00000514909 CDAN1Q8IWY9 1227 aa14.57□□□□□ -0.08
LDHBP3-201ENST00000514909 ZMYND15Q9H091 742 aa14.56□□□□□ -0.08
LDHBP3-201ENST00000514909 MAP2K5Q13163 448 aa14.54□□□□□ -0.08
LDHBP3-201ENST00000514909 DPY19L2Q6NUT2 758 aa14.52□□□□□ -0.09
LDHBP3-201ENST00000514909 PLPP6Q8IY26 295 aa14.52□□□□□ -0.09
LDHBP3-201ENST00000514909 TMEM121BQ9BXQ6 578 aaPredicted RBP14.52□□□□□ -0.09
LDHBP3-201ENST00000514909 RSPH6AQ9H0K4 717 aa14.51□□□□□ -0.09
LDHBP3-201ENST00000514909 KIF3CO14782 793 aa14.5□□□□□ -0.09
LDHBP3-201ENST00000514909 AMHR2Q16671 573 aa14.5□□□□□ -0.09
LDHBP3-201ENST00000514909 DDRGK1Q96HY6 314 aa14.5□□□□□ -0.09
LDHBP3-201ENST00000514909 L3MBTL3Q96JM7 780 aaPredicted RBP14.49□□□□□ -0.09
LDHBP3-201ENST00000514909 CCDC102AQ96A19 550 aa14.48□□□□□ -0.09
LDHBP3-201ENST00000514909 IRF6O14896 467 aa14.47□□□□□ -0.09
LDHBP3-201ENST00000514909 FAM117AQ9C073 453 aa14.47□□□□□ -0.09
LDHBP3-201ENST00000514909 SNPHO15079 494 aa14.46□□□□□ -0.09
LDHBP3-201ENST00000514909 PTGER2P43116 358 aa14.45□□□□□ -0.1
LDHBP3-201ENST00000514909 MAP3K9P80192 1104 aa14.45□□□□□ -0.1
LDHBP3-201ENST00000514909 C3orf67Q6ZVT6 689 aa14.45□□□□□ -0.1
LDHBP3-201ENST00000514909 NUTM2FA1L443 756 aa14.44□□□□□ -0.1
LDHBP3-201ENST00000514909 C2orf72A6NCS6 295 aa14.44□□□□□ -0.1
LDHBP3-201ENST00000514909 GNPATO15228 680 aa14.44□□□□□ -0.1
LDHBP3-201ENST00000514909 HIC1Q14526 733 aa14.44□□□□□ -0.1
LDHBP3-201ENST00000514909 PLEKHG3A1L390 1219 aa14.43□□□□□ -0.1
LDHBP3-201ENST00000514909 ZNF316A6NFI3 1004 aaPredicted RBP14.43□□□□□ -0.1
LDHBP3-201ENST00000514909 GRXCR2A6NFK2 248 aa14.43□□□□□ -0.1
LDHBP3-201ENST00000514909 OSBPP22059 807 aa14.43□□□□□ -0.1
LDHBP3-201ENST00000514909 BOLA1Q9Y3E2 137 aa14.43□□□□□ -0.1
LDHBP3-201ENST00000514909 FCHSD2O94868 740 aa14.41□□□□□ -0.1
LDHBP3-201ENST00000514909 PARP9Q8IXQ6 854 aa14.41□□□□□ -0.1
LDHBP3-201ENST00000514909 MARVELD3Q96A59 401 aa14.4□□□□□ -0.1
LDHBP3-201ENST00000514909 GOPCQ9HD26 462 aa14.4□□□□□ -0.1
LDHBP3-201ENST00000514909 OXER1Q8TDS5 423 aa14.38□□□□□ -0.11
LDHBP3-201ENST00000514909 G3V3G9 751 aa14.37□□□□□ -0.11
LDHBP3-201ENST00000514909 FLIIQ13045 1269 aa14.36□□□□□ -0.11
LDHBP3-201ENST00000514909 TBC1D12O60347 775 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms