RNA–Protein interactions for RNA: ENST00000514636.1

LEMD2-213, Transcript of LEM domain containing 2, humanhuman

TSL 3

Gene LEMD2, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-213ENST00000514636 DISP3Q9P2K9 1392 aa25.05■■□□□ 1.6
LEMD2-213ENST00000514636 ATP10AO60312 1499 aa25.05■■□□□ 1.6
LEMD2-213ENST00000514636 PLCH2O75038 1416 aa25.04■■□□□ 1.6
LEMD2-213ENST00000514636 C9orf84Q5VXU9 1444 aa25.03■■□□□ 1.6
LEMD2-213ENST00000514636 SCAPERQ9BY12 1400 aa25.03■■□□□ 1.6
LEMD2-213ENST00000514636 CSRNP3Q8WYN3 585 aa25.02■■□□□ 1.6
LEMD2-213ENST00000514636 DMRT2Q9Y5R5 561 aa25.02■■□□□ 1.6
LEMD2-213ENST00000514636 PTPRTO14522 1441 aa24.97■■□□□ 1.59
LEMD2-213ENST00000514636 MLECQ14165 292 aa24.97■■□□□ 1.59
LEMD2-213ENST00000514636 SETD1BQ9UPS6 1966 aaKnown RBP24.96■■□□□ 1.59
LEMD2-213ENST00000514636 PLPPR3Q6T4P5 718 aa24.96■■□□□ 1.59
LEMD2-213ENST00000514636 SPATA31D1Q6ZQQ2 1576 aa24.94■■□□□ 1.58
LEMD2-213ENST00000514636 UHRF1BP1Q6BDS2 1440 aa24.94■■□□□ 1.58
LEMD2-213ENST00000514636 KDM5CP41229 1560 aa24.93■■□□□ 1.58
LEMD2-213ENST00000514636 REREQ9P2R6 1566 aa24.93■■□□□ 1.58
LEMD2-213ENST00000514636 IQSEC2Q5JU85 1478 aa24.93■■□□□ 1.58
LEMD2-213ENST00000514636 CDK13Q14004 1512 aaKnown RBP24.91■■□□□ 1.58
LEMD2-213ENST00000514636 LTBP4Q8N2S1 1624 aa24.91■■□□□ 1.58
LEMD2-213ENST00000514636 CEBPAP49715 358 aaPredicted RBP24.91■■□□□ 1.58
LEMD2-213ENST00000514636 ZNF518AQ6AHZ1 1483 aa24.9■■□□□ 1.58
LEMD2-213ENST00000514636 EEA1Q15075 1411 aa24.89■■□□□ 1.58
LEMD2-213ENST00000514636 EFCAB2Q5VUJ9 269 aa24.86■■□□□ 1.57
LEMD2-213ENST00000514636 MYO5CQ9NQX4 1742 aa24.86■■□□□ 1.57
LEMD2-213ENST00000514636 DIP2CQ9Y2E4 1556 aa24.84■■□□□ 1.57
LEMD2-213ENST00000514636 AGLP35573 1532 aa24.82■■□□□ 1.56
LEMD2-213ENST00000514636 MLH3Q9UHC1 1453 aa24.81■■□□□ 1.56
LEMD2-213ENST00000514636 C3P01024 1663 aa24.81■■□□□ 1.56
LEMD2-213ENST00000514636 NCOA1Q15788 1441 aa24.79■■□□□ 1.56
LEMD2-213ENST00000514636 TRAPPC8Q9Y2L5 1435 aa24.78■■□□□ 1.56
LEMD2-213ENST00000514636 AFAP1Q8N556 730 aa24.76■■□□□ 1.55
LEMD2-213ENST00000514636 KIF14Q15058 1648 aa24.75■■□□□ 1.55
LEMD2-213ENST00000514636 ABCA6Q8N139 1617 aa24.75■■□□□ 1.55
LEMD2-213ENST00000514636 RANGAP1P46060 587 aaPredicted RBP24.73■■□□□ 1.55
LEMD2-213ENST00000514636 TROQ12816 1431 aaPredicted RBP24.72■■□□□ 1.55
LEMD2-213ENST00000514636 FMN1Q68DA7 1419 aa24.72■■□□□ 1.55
LEMD2-213ENST00000514636 CNTLNQ9NXG0 1405 aa24.7■■□□□ 1.55
LEMD2-213ENST00000514636 ARHGAP5Q13017 1502 aa24.7■■□□□ 1.54
LEMD2-213ENST00000514636 CDK11AQ9UQ88 783 aaPredicted RBP24.69■■□□□ 1.54
LEMD2-213ENST00000514636 NPATQ14207 1427 aa24.69■■□□□ 1.54
LEMD2-213ENST00000514636 ABCC1P33527 1531 aa24.66■■□□□ 1.54
LEMD2-213ENST00000514636 CDC42BPBQ9Y5S2 1711 aa24.65■■□□□ 1.54
LEMD2-213ENST00000514636 MROH2AA6NES4 1674 aa24.64■■□□□ 1.53
LEMD2-213ENST00000514636 ARHGAP35Q9NRY4 1499 aa24.63■■□□□ 1.53
LEMD2-213ENST00000514636 KIDINS220Q9ULH0 1771 aa24.62■■□□□ 1.53
LEMD2-213ENST00000514636 CLIP1P30622 1438 aa24.61■■□□□ 1.53
LEMD2-213ENST00000514636 CAMSAP1Q5T5Y3 1602 aa24.61■■□□□ 1.53
LEMD2-213ENST00000514636 PREX2Q70Z35 1606 aa24.61■■□□□ 1.53
LEMD2-213ENST00000514636 PLA2R1Q13018 1463 aa24.59■■□□□ 1.53
LEMD2-213ENST00000514636 ITSN2Q9NZM3 1697 aa24.59■■□□□ 1.53
LEMD2-213ENST00000514636 LRRIQ1Q96JM4 1722 aa24.56■■□□□ 1.52
LEMD2-213ENST00000514636 TCOF1Q13428 1488 aaKnown RBP24.56■■□□□ 1.52
LEMD2-213ENST00000514636 ZNF142P52746 1687 aaPredicted RBP24.56■■□□□ 1.52
LEMD2-213ENST00000514636 ESF1Q9H501 851 aaKnown RBP24.54■■□□□ 1.52
LEMD2-213ENST00000514636 ZNF335Q9H4Z2 1342 aaPredicted RBP24.53■■□□□ 1.52
LEMD2-213ENST00000514636 ZMYM3Q14202 1370 aa24.52■■□□□ 1.52
LEMD2-213ENST00000514636 PKD2Q13563 968 aa24.5■■□□□ 1.51
LEMD2-213ENST00000514636 SAMD9LQ8IVG5 1584 aa24.5■■□□□ 1.51
LEMD2-213ENST00000514636 UBAP1LF5GYI3 381 aa24.48■■□□□ 1.51
LEMD2-213ENST00000514636 PLXNC1O60486 1568 aa24.48■■□□□ 1.51
LEMD2-213ENST00000514636 MYO3AQ8NEV4 1616 aa24.48■■□□□ 1.51
LEMD2-213ENST00000514636 MYT1LQ9UL68 1186 aa24.48■■□□□ 1.51
LEMD2-213ENST00000514636 NCKAP5LQ9HCH0 1330 aa24.47■■□□□ 1.51
LEMD2-213ENST00000514636 ATP1B4Q9UN42 357 aaPredicted RBP24.46■■□□□ 1.51
LEMD2-213ENST00000514636 CEP170BQ9Y4F5 1589 aaPredicted RBP24.46■■□□□ 1.51
LEMD2-213ENST00000514636 PTPRKQ15262 1439 aa24.45■■□□□ 1.51
LEMD2-213ENST00000514636 CDC42BPAQ5VT25 1732 aa24.45■■□□□ 1.5
LEMD2-213ENST00000514636 CCDC18Q5T9S5 1454 aa24.44■■□□□ 1.5
LEMD2-213ENST00000514636 CASKIN1Q8WXD9 1431 aa24.4■■□□□ 1.5
LEMD2-213ENST00000514636 MED1Q15648 1581 aaPredicted RBP24.4■■□□□ 1.5
LEMD2-213ENST00000514636 INO80Q9ULG1 1556 aaPredicted RBP24.38■■□□□ 1.49
LEMD2-213ENST00000514636 CLTCQ00610 1675 aaKnown RBP24.38■■□□□ 1.49
LEMD2-213ENST00000514636 KIAA1107Q9UPP5 1409 aa24.37■■□□□ 1.49
LEMD2-213ENST00000514636 ATP7AQ04656 1500 aa24.36■■□□□ 1.49
LEMD2-213ENST00000514636 SYCP2Q9BX26 1530 aa24.36■■□□□ 1.49
LEMD2-213ENST00000514636 PPP6R1Q9UPN7 881 aa24.35■■□□□ 1.49
LEMD2-213ENST00000514636 SUPT6HQ7KZ85 1726 aaKnown RBP24.35■■□□□ 1.49
LEMD2-213ENST00000514636 UBTFP17480 764 aaKnown RBP24.34■■□□□ 1.49
LEMD2-213ENST00000514636 GPATCH8Q9UKJ3 1502 aaKnown RBP24.34■■□□□ 1.49
LEMD2-213ENST00000514636 SPAG9O60271 1321 aaKnown RBP24.34■■□□□ 1.49
LEMD2-213ENST00000514636 A2ML1A8K2U0 1454 aa24.33■■□□□ 1.49
LEMD2-213ENST00000514636 A2MP01023 1474 aa24.33■■□□□ 1.49
LEMD2-213ENST00000514636 CPS1P31327 1500 aa24.33■■□□□ 1.49
LEMD2-213ENST00000514636 DNMT1P26358 1616 aaKnown RBP24.32■■□□□ 1.48
LEMD2-213ENST00000514636 HSPA1LP34931 641 aa24.31■■□□□ 1.48
LEMD2-213ENST00000514636 NEURL4Q96JN8 1562 aa24.3■■□□□ 1.48
LEMD2-213ENST00000514636 PLEKHH2Q8IVE3 1493 aa24.3■■□□□ 1.48
LEMD2-213ENST00000514636 FYCO1Q9BQS8 1478 aa24.26■■□□□ 1.47
LEMD2-213ENST00000514636 ALKQ9UM73 1620 aa24.26■■□□□ 1.47
LEMD2-213ENST00000514636 SHANK2Q9UPX8 1470 aa24.26■■□□□ 1.47
LEMD2-213ENST00000514636 TOM1O60784 492 aa24.24■■□□□ 1.47
LEMD2-213ENST00000514636 HNRNPMP52272 730 aaKnown RBP eCLIP24.24■■□□□ 1.47
LEMD2-213ENST00000514636 POLR1AO95602 1720 aaPredicted RBP24.24■■□□□ 1.47
LEMD2-213ENST00000514636 ADGBQ8N7X0 1667 aa24.23■■□□□ 1.47
LEMD2-213ENST00000514636 VWDEQ8N2E2 1590 aa24.21■■□□□ 1.47
LEMD2-213ENST00000514636 FAM135AQ9P2D6 1515 aa24.21■■□□□ 1.47
LEMD2-213ENST00000514636 GGT6Q6P531 493 aa24.19■■□□□ 1.46
LEMD2-213ENST00000514636 ZNF777Q9ULD5 760 aaPredicted RBP24.19■■□□□ 1.46
LEMD2-213ENST00000514636 MED14O60244 1454 aa24.19■■□□□ 1.46
LEMD2-213ENST00000514636 RTEL1-TNFRSF6BF6WH68 1400 aa24.17■■□□□ 1.46
LEMD2-213ENST00000514636 PZPP20742 1482 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms