RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 CFAP74Q9C0B2 1584 aa15.42■□□□□ 0.06
CAST-239ENST00000513666 AKNAQ7Z591 1439 aa15.42■□□□□ 0.06
CAST-239ENST00000513666 ZMYM4Q5VZL5 1548 aa15.41■□□□□ 0.06
CAST-239ENST00000513666 SIGLEC1Q9BZZ2 1709 aa15.41■□□□□ 0.06
CAST-239ENST00000513666 ZFYVE16Q7Z3T8 1539 aa15.39■□□□□ 0.05
CAST-239ENST00000513666 EFCAB5A4FU69 1503 aa15.39■□□□□ 0.05
CAST-239ENST00000513666 TTC37Q6PGP7 1564 aa15.38■□□□□ 0.05
CAST-239ENST00000513666 FER1L4A9Z1Z3 1794 aa15.37■□□□□ 0.05
CAST-239ENST00000513666 YEATS2Q9ULM3 1422 aa15.37■□□□□ 0.05
CAST-239ENST00000513666 MAGI2Q86UL8 1455 aa15.37■□□□□ 0.05
CAST-239ENST00000513666 PLEKHD1A6NEE1 506 aa15.36■□□□□ 0.05
CAST-239ENST00000513666 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.36■□□□□ 0.05
CAST-239ENST00000513666 DISP3Q9P2K9 1392 aa15.34■□□□□ 0.05
CAST-239ENST00000513666 DCAF8L1A6NGE4 600 aa15.34■□□□□ 0.05
CAST-239ENST00000513666 HECW1Q76N89 1606 aa15.34■□□□□ 0.05
CAST-239ENST00000513666 ILDR2Q71H61 639 aa15.33■□□□□ 0.05
CAST-239ENST00000513666 SOCS7O14512 581 aa15.33■□□□□ 0.04
CAST-239ENST00000513666 MLECQ14165 292 aa15.33■□□□□ 0.04
CAST-239ENST00000513666 PREX1Q8TCU6 1659 aa15.32■□□□□ 0.04
CAST-239ENST00000513666 ARHGEF12Q9NZN5 1544 aa15.32■□□□□ 0.04
CAST-239ENST00000513666 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
CAST-239ENST00000513666 STRCQ7RTU9 1775 aa15.28■□□□□ 0.04
CAST-239ENST00000513666 ATP10AO60312 1499 aa15.28■□□□□ 0.04
CAST-239ENST00000513666 SCAPERQ9BY12 1400 aa15.28■□□□□ 0.04
CAST-239ENST00000513666 NPM3O75607 178 aaKnown RBP15.27■□□□□ 0.04
CAST-239ENST00000513666 C9orf84Q5VXU9 1444 aa15.27■□□□□ 0.03
CAST-239ENST00000513666 PLCH2O75038 1416 aa15.26■□□□□ 0.03
CAST-239ENST00000513666 RANGAP1P46060 587 aaPredicted RBP15.25■□□□□ 0.03
CAST-239ENST00000513666 SPATA31D1Q6ZQQ2 1576 aa15.24■□□□□ 0.03
CAST-239ENST00000513666 CEBPAP49715 358 aaPredicted RBP15.24■□□□□ 0.03
CAST-239ENST00000513666 CDK13Q14004 1512 aaKnown RBP15.22■□□□□ 0.03
CAST-239ENST00000513666 UHRF1BP1Q6BDS2 1440 aa15.22■□□□□ 0.03
CAST-239ENST00000513666 SETD1BQ9UPS6 1966 aaKnown RBP15.22■□□□□ 0.03
CAST-239ENST00000513666 PTPRTO14522 1441 aa15.2■□□□□ 0.02
CAST-239ENST00000513666 MYO5CQ9NQX4 1742 aa15.2■□□□□ 0.02
CAST-239ENST00000513666 EFCAB2Q5VUJ9 269 aa15.18■□□□□ 0.02
CAST-239ENST00000513666 ZNF518AQ6AHZ1 1483 aa15.18■□□□□ 0.02
CAST-239ENST00000513666 EEA1Q15075 1411 aa15.17■□□□□ 0.02
CAST-239ENST00000513666 KDM5CP41229 1560 aa15.17■□□□□ 0.02
CAST-239ENST00000513666 IQSEC2Q5JU85 1478 aa15.16■□□□□ 0.02
CAST-239ENST00000513666 LTBP4Q8N2S1 1624 aa15.15■□□□□ 0.02
CAST-239ENST00000513666 REREQ9P2R6 1566 aa15.15■□□□□ 0.02
CAST-239ENST00000513666 DIP2CQ9Y2E4 1556 aa15.15■□□□□ 0.02
CAST-239ENST00000513666 C3P01024 1663 aa15.15■□□□□ 0.02
CAST-239ENST00000513666 AFAP1Q8N556 730 aa15.12■□□□□ 0.01
CAST-239ENST00000513666 KIF14Q15058 1648 aa15.12■□□□□ 0.01
CAST-239ENST00000513666 RNF39Q9H2S5 420 aa15.12■□□□□ 0.01
CAST-239ENST00000513666 ABCA6Q8N139 1617 aa15.11■□□□□ 0.01
CAST-239ENST00000513666 ARHGAP5Q13017 1502 aa15.11■□□□□ 0.01
CAST-239ENST00000513666 TRAPPC8Q9Y2L5 1435 aa15.1■□□□□ 0.01
CAST-239ENST00000513666 CDK11AQ9UQ88 783 aaPredicted RBP15.1■□□□□ 0.01
CAST-239ENST00000513666 AGLP35573 1532 aa15.1■□□□□ 0.01
CAST-239ENST00000513666 NCOA1Q15788 1441 aa15.1■□□□□ 0.01
CAST-239ENST00000513666 KCNA4P22459 653 aa15.09■□□□□ 0.01
CAST-239ENST00000513666 MLH3Q9UHC1 1453 aa15.09■□□□□ 0.01
CAST-239ENST00000513666 MYT1LQ9UL68 1186 aa15.08■□□□□ 0.01
CAST-239ENST00000513666 FMN1Q68DA7 1419 aa15.08■□□□□ 0
CAST-239ENST00000513666 ESF1Q9H501 851 aaKnown RBP15.07■□□□□ 0
CAST-239ENST00000513666 TROQ12816 1431 aaPredicted RBP15.07■□□□□ 0
CAST-239ENST00000513666 ATP1B4Q9UN42 357 aaPredicted RBP15.07■□□□□ 0
CAST-239ENST00000513666 CDC42BPBQ9Y5S2 1711 aa15.05■□□□□ 0
CAST-239ENST00000513666 CLIP1P30622 1438 aa15.05■□□□□ -0
CAST-239ENST00000513666 CNTLNQ9NXG0 1405 aa15.05■□□□□ -0
CAST-239ENST00000513666 CAMSAP1Q5T5Y3 1602 aa15.04■□□□□ -0
CAST-239ENST00000513666 ABCC1P33527 1531 aa15.03■□□□□ -0
CAST-239ENST00000513666 NPATQ14207 1427 aa15.02■□□□□ -0
CAST-239ENST00000513666 ITSN2Q9NZM3 1697 aa15.02□□□□□ -0.01
CAST-239ENST00000513666 PREX2Q70Z35 1606 aa15.02□□□□□ -0.01
CAST-239ENST00000513666 KIDINS220Q9ULH0 1771 aa15.01□□□□□ -0.01
CAST-239ENST00000513666 MROH2AA6NES4 1674 aa15.01□□□□□ -0.01
CAST-239ENST00000513666 ARHGAP35Q9NRY4 1499 aa15.01□□□□□ -0.01
CAST-239ENST00000513666 LRRIQ1Q96JM4 1722 aa15□□□□□ -0.01
CAST-239ENST00000513666 CACNB1Q02641 598 aaPredicted RBP15□□□□□ -0.01
CAST-239ENST00000513666 UBAP1LF5GYI3 381 aa14.98□□□□□ -0.01
CAST-239ENST00000513666 ZNF335Q9H4Z2 1342 aaPredicted RBP14.98□□□□□ -0.01
CAST-239ENST00000513666 NCKAP5LQ9HCH0 1330 aa14.96□□□□□ -0.01
CAST-239ENST00000513666 ZMYM3Q14202 1370 aa14.96□□□□□ -0.01
CAST-239ENST00000513666 ZNF142P52746 1687 aaPredicted RBP14.96□□□□□ -0.01
CAST-239ENST00000513666 PLA2R1Q13018 1463 aa14.96□□□□□ -0.01
CAST-239ENST00000513666 UBTFP17480 764 aaKnown RBP14.95□□□□□ -0.02
CAST-239ENST00000513666 MYO3AQ8NEV4 1616 aa14.94□□□□□ -0.02
CAST-239ENST00000513666 PKD2Q13563 968 aa14.94□□□□□ -0.02
CAST-239ENST00000513666 TCOF1Q13428 1488 aaKnown RBP14.94□□□□□ -0.02
CAST-239ENST00000513666 SAMD9LQ8IVG5 1584 aa14.94□□□□□ -0.02
CAST-239ENST00000513666 CDC42BPAQ5VT25 1732 aa14.93□□□□□ -0.02
CAST-239ENST00000513666 SUPT6HQ7KZ85 1726 aaKnown RBP14.92□□□□□ -0.02
CAST-239ENST00000513666 CLTCQ00610 1675 aaKnown RBP14.92□□□□□ -0.02
CAST-239ENST00000513666 CEP170BQ9Y4F5 1589 aaPredicted RBP14.92□□□□□ -0.02
CAST-239ENST00000513666 CCDC18Q5T9S5 1454 aa14.91□□□□□ -0.02
CAST-239ENST00000513666 PTPRKQ15262 1439 aa14.9□□□□□ -0.02
CAST-239ENST00000513666 C1QBPQ07021 282 aaKnown RBP14.9□□□□□ -0.02
CAST-239ENST00000513666 EHMT2Q96KQ7 1210 aa14.9□□□□□ -0.02
CAST-239ENST00000513666 PLXNC1O60486 1568 aa14.89□□□□□ -0.03
CAST-239ENST00000513666 MED1Q15648 1581 aaPredicted RBP14.89□□□□□ -0.03
CAST-239ENST00000513666 SPAG9O60271 1321 aaKnown RBP14.88□□□□□ -0.03
CAST-239ENST00000513666 SYCP2Q9BX26 1530 aa14.88□□□□□ -0.03
CAST-239ENST00000513666 CASKIN1Q8WXD9 1431 aa14.88□□□□□ -0.03
CAST-239ENST00000513666 ATP7AQ04656 1500 aa14.87□□□□□ -0.03
CAST-239ENST00000513666 HSPA1LP34931 641 aa14.86□□□□□ -0.03
CAST-239ENST00000513666 ZNF777Q9ULD5 760 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms