RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 RIOK3O14730 519 aaKnown RBP10.5□□□□□ -0.73
PDLIM5-218ENST00000513341 VGFO15240 615 aaPredicted RBP10.48□□□□□ -0.73
PDLIM5-218ENST00000513341 ZNF316A6NFI3 1004 aaPredicted RBP10.46□□□□□ -0.73
PDLIM5-218ENST00000513341 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-218ENST00000513341 ARSIQ5FYB1 569 aa10.45□□□□□ -0.74
PDLIM5-218ENST00000513341 RNF25Q96BH1 459 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-218ENST00000513341 ZFP91Q96JP5 570 aaPredicted RBP10.45□□□□□ -0.74
PDLIM5-218ENST00000513341 PHF8Q9UPP1 1060 aa10.45□□□□□ -0.74
PDLIM5-218ENST00000513341 PBX2P40425 430 aa10.42□□□□□ -0.74
PDLIM5-218ENST00000513341 NLRP6P59044 892 aa10.42□□□□□ -0.74
PDLIM5-218ENST00000513341 LSM11P83369 360 aaKnown RBP eCLIP10.42□□□□□ -0.741e-7■■■■■ 32.8
PDLIM5-218ENST00000513341 KIF3CO14782 793 aa10.39□□□□□ -0.75
PDLIM5-218ENST00000513341 ANKRD13DQ6ZTN6 518 aa10.39□□□□□ -0.75
PDLIM5-218ENST00000513341 FBXO22Q8NEZ5 403 aa10.39□□□□□ -0.75
PDLIM5-218ENST00000513341 TAOK2Q9UL54 1235 aa10.37□□□□□ -0.75
PDLIM5-218ENST00000513341 SLC34A2O95436 690 aa10.36□□□□□ -0.75
PDLIM5-218ENST00000513341 KHSRPQ92945 711 aaKnown RBP eCLIP10.35□□□□□ -0.759e-7■■■■□ 21
PDLIM5-218ENST00000513341 C2orf72A6NCS6 295 aa10.29□□□□□ -0.76
PDLIM5-218ENST00000513341 POTEEQ6S8J3 1075 aa10.29□□□□□ -0.76
PDLIM5-218ENST00000513341 BCL11BQ9C0K0 894 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-218ENST00000513341 HCSTQ9UBK5 93 aa10.29□□□□□ -0.76
PDLIM5-218ENST00000513341 MFRPQ9BY79 579 aa10.28□□□□□ -0.76
PDLIM5-218ENST00000513341 NUDT7P0C024 238 aa10.27□□□□□ -0.77
PDLIM5-218ENST00000513341 LHX6Q9UPM6 363 aa10.27□□□□□ -0.77
PDLIM5-218ENST00000513341 PCDHGA4Q9Y5G9 962 aa10.27□□□□□ -0.77
PDLIM5-218ENST00000513341 PSDA5PKW4 1024 aaPredicted RBP10.26□□□□□ -0.77
PDLIM5-218ENST00000513341 PLA2G2EQ9NZK7 142 aa10.25□□□□□ -0.77
PDLIM5-218ENST00000513341 TK2O00142 265 aa10.22□□□□□ -0.77
PDLIM5-218ENST00000513341 ARHGAP33O14559 1287 aa10.22□□□□□ -0.77
PDLIM5-218ENST00000513341 STK24Q9Y6E0 443 aa10.22□□□□□ -0.77
PDLIM5-218ENST00000513341 ADGRD1Q6QNK2 874 aa10.21□□□□□ -0.77
PDLIM5-218ENST00000513341 KDM4FA0A1W2PPD8 638 aa10.2□□□□□ -0.78
PDLIM5-218ENST00000513341 AXIN2Q9Y2T1 843 aa10.2□□□□□ -0.78
PDLIM5-218ENST00000513341 TMC2Q8TDI7 906 aa10.19□□□□□ -0.78
PDLIM5-218ENST00000513341 STK25O00506 426 aa10.16□□□□□ -0.78
PDLIM5-218ENST00000513341 HRO43593 1189 aa10.16□□□□□ -0.78
PDLIM5-218ENST00000513341 PTCD2Q8WV60 388 aaKnown RBP10.15□□□□□ -0.78
PDLIM5-218ENST00000513341 RGS20O76081 388 aa10.07□□□□□ -0.8
PDLIM5-218ENST00000513341 FOXK1P85037 733 aa10.07□□□□□ -0.8
PDLIM5-218ENST00000513341 PPP4R3BQ5MIZ7 849 aa10.06□□□□□ -0.8
PDLIM5-218ENST00000513341 IFFO2Q5TF58 517 aa10.06□□□□□ -0.8
PDLIM5-218ENST00000513341 DMRTA1Q5VZB9 504 aa10.06□□□□□ -0.8
PDLIM5-218ENST00000513341 ECM2O94769 699 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-218ENST00000513341 PSEN2P49810 448 aa10.04□□□□□ -0.8
PDLIM5-218ENST00000513341 TBC1D12O60347 775 aa10.03□□□□□ -0.8
PDLIM5-218ENST00000513341 PPP1R37O75864 691 aa10.03□□□□□ -0.8
PDLIM5-218ENST00000513341 GPHNQ9NQX3 736 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-218ENST00000513341 PLPP6Q8IY26 295 aa10.01□□□□□ -0.81
PDLIM5-218ENST00000513341 KCTD12Q96CX2 325 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-218ENST00000513341 SLC4A5Q9BY07 1137 aa10.01□□□□□ -0.81
PDLIM5-218ENST00000513341 STAC3Q96MF2 364 aa10□□□□□ -0.81
PDLIM5-218ENST00000513341 KCNH8Q96L42 1107 aa9.99□□□□□ -0.81
PDLIM5-218ENST00000513341 RGL2O15211 777 aa9.97□□□□□ -0.81
PDLIM5-218ENST00000513341 VPS9D1Q9Y2B5 631 aa9.97□□□□□ -0.81
PDLIM5-218ENST00000513341 PKD2Q13563 968 aa9.96□□□□□ -0.82
PDLIM5-218ENST00000513341 DSG2Q14126 1118 aa9.94□□□□□ -0.82
PDLIM5-218ENST00000513341 KCNK17Q96T54 332 aa9.94□□□□□ -0.82
PDLIM5-218ENST00000513341 BCL2L12Q9HB09 334 aa9.93□□□□□ -0.82
PDLIM5-218ENST00000513341 BHMG1C9JSJ3 638 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-218ENST00000513341 OXER1Q8TDS5 423 aa9.92□□□□□ -0.82
PDLIM5-218ENST00000513341 A0A0G2JS52 829 aa9.88□□□□□ -0.83
PDLIM5-218ENST00000513341 THSD4Q6ZMP0 1018 aa9.88□□□□□ -0.83
PDLIM5-218ENST00000513341 PTPN5P54829 565 aa9.87□□□□□ -0.83
PDLIM5-218ENST00000513341 HS6ST3Q8IZP7 471 aa9.86□□□□□ -0.83
PDLIM5-218ENST00000513341 FOSBP53539 338 aa9.85□□□□□ -0.83
PDLIM5-218ENST00000513341 IRX2Q9BZI1 471 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-218ENST00000513341 ZNF454Q8N9F8 522 aa9.84□□□□□ -0.83
PDLIM5-218ENST00000513341 ZBED2Q9BTP6 218 aa9.84□□□□□ -0.83
PDLIM5-218ENST00000513341 ANO8Q9HCE9 1232 aaPredicted RBP9.84□□□□□ -0.83
PDLIM5-218ENST00000513341 PTPREP23469 700 aa9.83□□□□□ -0.84
PDLIM5-218ENST00000513341 DNAJC5Q9H3Z4 198 aa9.83□□□□□ -0.84
PDLIM5-218ENST00000513341 CRISPLD2Q9H0B8 497 aa9.82□□□□□ -0.84
PDLIM5-218ENST00000513341 MRPL50Q8N5N7 158 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-218ENST00000513341 WNT2BQ93097 391 aa9.8□□□□□ -0.84
PDLIM5-218ENST00000513341 JPH4Q96JJ6 628 aa9.8□□□□□ -0.84
PDLIM5-218ENST00000513341 GOLGA8CPA6NN73 597 aa9.79□□□□□ -0.84
PDLIM5-218ENST00000513341 NBPF3Q9H094 633 aa9.79□□□□□ -0.84
PDLIM5-218ENST00000513341 RYDENQ9NUL5 291 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-218ENST00000513341 ITGBL1O95965 494 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-218ENST00000513341 PPP1R15BQ5SWA1 713 aa9.76□□□□□ -0.85
PDLIM5-218ENST00000513341 UPF1Q92900 1129 aaKnown RBP eCLIP9.76□□□□□ -0.85
PDLIM5-218ENST00000513341 ZDHHC16Q969W1 377 aa9.76□□□□□ -0.85
PDLIM5-218ENST00000513341 ADAM33Q9BZ11 813 aa9.72□□□□□ -0.85
PDLIM5-218ENST00000513341 EVI5O60447 810 aa9.71□□□□□ -0.86
PDLIM5-218ENST00000513341 PDE4AP27815 886 aa9.71□□□□□ -0.86
PDLIM5-218ENST00000513341 NYAP1Q6ZVC0 841 aa9.71□□□□□ -0.86
PDLIM5-218ENST00000513341 RABGEF1Q9UJ41 708 aa9.71□□□□□ -0.86
PDLIM5-218ENST00000513341 PPP1R3GB7ZBB8 358 aa9.7□□□□□ -0.86
PDLIM5-218ENST00000513341 LAPTM4BQ86VI4 370 aa9.69□□□□□ -0.86
PDLIM5-218ENST00000513341 NCKAP5LQ9HCH0 1330 aa9.68□□□□□ -0.86
PDLIM5-218ENST00000513341 ANKK1Q8NFD2 765 aa9.68□□□□□ -0.86
PDLIM5-218ENST00000513341 NKX1-1Q15270 411 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-218ENST00000513341 ONECUT3O60422 494 aaPredicted RBP9.66□□□□□ -0.86
PDLIM5-218ENST00000513341 CHGAP10645 457 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-218ENST00000513341 SOWAHBA6NEL2 793 aa9.64□□□□□ -0.87
PDLIM5-218ENST00000513341 FBXW7Q969H0 707 aa9.63□□□□□ -0.87
PDLIM5-218ENST00000513341 MFSD10Q14728 455 aa9.62□□□□□ -0.87
PDLIM5-218ENST00000513341 PCDHGA10Q9Y5H3 936 aa9.62□□□□□ -0.87
PDLIM5-218ENST00000513341 MAP3K9P80192 1104 aa9.61□□□□□ -0.87
PDLIM5-218ENST00000513341 LAPTM4AQ15012 233 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms