RNA–Protein interactions for RNA: ENST00000511896.5

APBB3-219, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,032 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-219ENST00000511896 GCC2Q8IWJ2 1684 aa28.01■■■□□ 2.08
APBB3-219ENST00000511896 UHRF1BP1LA0JNW5 1464 aa28.01■■■□□ 2.07
APBB3-219ENST00000511896 ROCK1Q13464 1354 aa28■■■□□ 2.07
APBB3-219ENST00000511896 ZNF777Q9ULD5 760 aaPredicted RBP27.99■■■□□ 2.07
APBB3-219ENST00000511896 OSCARQ8IYS5 282 aa27.98■■■□□ 2.07
APBB3-219ENST00000511896 KDM5BQ9UGL1 1544 aa27.94■■■□□ 2.06
APBB3-219ENST00000511896 ZCCHC11Q5TAX3 1644 aaKnown RBP27.91■■■□□ 2.06
APBB3-219ENST00000511896 KDM6BO15054 1643 aa27.9■■■□□ 2.06
APBB3-219ENST00000511896 ZNF316A6NFI3 1004 aaPredicted RBP27.9■■■□□ 2.06
APBB3-219ENST00000511896 SIN3AQ96ST3 1273 aa27.88■■■□□ 2.05
APBB3-219ENST00000511896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.86■■■□□ 2.05
APBB3-219ENST00000511896 PREX2Q70Z35 1606 aa27.85■■■□□ 2.05
APBB3-219ENST00000511896 CDC42BPBQ9Y5S2 1711 aa27.85■■■□□ 2.05
APBB3-219ENST00000511896 NCOA1Q15788 1441 aa27.85■■■□□ 2.05
APBB3-219ENST00000511896 CROCC2H7BZ55 1655 aa27.85■■■□□ 2.05
APBB3-219ENST00000511896 TTC37Q6PGP7 1564 aa27.84■■■□□ 2.05
APBB3-219ENST00000511896 ADGRL2O95490 1459 aa27.82■■■□□ 2.04
APBB3-219ENST00000511896 NEUROD1Q13562 356 aa27.82■■■□□ 2.04
APBB3-219ENST00000511896 KCNH8Q96L42 1107 aa27.82■■■□□ 2.04
APBB3-219ENST00000511896 TRIM52Q96A61 297 aa27.8■■■□□ 2.04
APBB3-219ENST00000511896 ACIN1Q9UKV3 1341 aaKnown RBP27.8■■■□□ 2.04
APBB3-219ENST00000511896 ADGBQ8N7X0 1667 aa27.8■■■□□ 2.04
APBB3-219ENST00000511896 TIMELESSQ9UNS1 1208 aa27.79■■■□□ 2.04
APBB3-219ENST00000511896 SHANK2Q9UPX8 1470 aa27.78■■■□□ 2.04
APBB3-219ENST00000511896 SAMD9LQ8IVG5 1584 aa27.78■■■□□ 2.04
APBB3-219ENST00000511896 MBD5Q9P267 1494 aa27.77■■■□□ 2.04
APBB3-219ENST00000511896 ANKRD30AQ9BXX3 1397 aa27.77■■■□□ 2.04
APBB3-219ENST00000511896 HNRNPMP52272 730 aaKnown RBP eCLIP27.77■■■□□ 2.04
APBB3-219ENST00000511896 ARHGEF5Q12774 1597 aa27.76■■■□□ 2.04
APBB3-219ENST00000511896 DENND4BO75064 1496 aaPredicted RBP27.75■■■□□ 2.03
APBB3-219ENST00000511896 ARHGAP5Q13017 1502 aa27.74■■■□□ 2.03
APBB3-219ENST00000511896 MYO5CQ9NQX4 1742 aa27.74■■■□□ 2.03
APBB3-219ENST00000511896 C9orf84Q5VXU9 1444 aa27.74■■■□□ 2.03
APBB3-219ENST00000511896 TSPY4P0CV99 314 aa27.74■■■□□ 2.03
APBB3-219ENST00000511896 TSPY10P0CW01 314 aa27.74■■■□□ 2.03
APBB3-219ENST00000511896 DIEXFQ68CQ4 756 aaKnown RBP27.74■■■□□ 2.03
APBB3-219ENST00000511896 MPHOSPH9Q99550 1183 aa27.73■■■□□ 2.03
APBB3-219ENST00000511896 RSPH4AQ5TD94 716 aa27.71■■■□□ 2.03
APBB3-219ENST00000511896 PLCH2O75038 1416 aa27.69■■■□□ 2.02
APBB3-219ENST00000511896 CCDC141Q6ZP82 1450 aa27.69■■■□□ 2.02
APBB3-219ENST00000511896 WDR7Q9Y4E6 1490 aa27.67■■■□□ 2.02
APBB3-219ENST00000511896 SYCP2Q9BX26 1530 aa27.66■■■□□ 2.02
APBB3-219ENST00000511896 ANKRD50Q9ULJ7 1429 aa27.66■■■□□ 2.02
APBB3-219ENST00000511896 KIAA1107Q9UPP5 1409 aa27.65■■■□□ 2.02
APBB3-219ENST00000511896 PLEKHH2Q8IVE3 1493 aa27.64■■■□□ 2.02
APBB3-219ENST00000511896 PPP1R15AO75807 674 aaPredicted RBP27.62■■■□□ 2.01
APBB3-219ENST00000511896 EFCAB2Q5VUJ9 269 aa27.62■■■□□ 2.01
APBB3-219ENST00000511896 TONSLQ96HA7 1378 aa27.61■■■□□ 2.01
APBB3-219ENST00000511896 KIF15Q9NS87 1388 aa27.59■■■□□ 2.01
APBB3-219ENST00000511896 SLC4A1APQ9BWU0 796 aaKnown RBP27.59■■■□□ 2.01
APBB3-219ENST00000511896 ASXL2Q76L83 1435 aa27.58■■■□□ 2.01
APBB3-219ENST00000511896 PZPP20742 1482 aa27.57■■■□□ 2
APBB3-219ENST00000511896 ARAP3Q8WWN8 1544 aa27.56■■■□□ 2
APBB3-219ENST00000511896 ARHGEF12Q9NZN5 1544 aa27.56■■■□□ 2
APBB3-219ENST00000511896 FOXD1Q16676 465 aa27.56■■■□□ 2
APBB3-219ENST00000511896 MAST1Q9Y2H9 1570 aa27.55■■■□□ 2
APBB3-219ENST00000511896 ANKRD30BQ9BXX2 1392 aa27.53■■■□□ 2
APBB3-219ENST00000511896 NPM1P06748 294 aaKnown RBP eCLIP27.53■■■□□ 2
APBB3-219ENST00000511896 ABCA9Q8IUA7 1624 aa27.52■■■□□ 2
APBB3-219ENST00000511896 ABCC1P33527 1531 aa27.51■■□□□ 1.99
APBB3-219ENST00000511896 NUP155O75694 1391 aa27.46■■□□□ 1.99
APBB3-219ENST00000511896 PLXNC1O60486 1568 aa27.45■■□□□ 1.98
APBB3-219ENST00000511896 TRAPPC8Q9Y2L5 1435 aa27.45■■□□□ 1.98
APBB3-219ENST00000511896 KDM5DQ9BY66 1539 aa27.43■■□□□ 1.98
APBB3-219ENST00000511896 FANCAO15360 1455 aa27.43■■□□□ 1.98
APBB3-219ENST00000511896 PKD2Q13563 968 aa27.42■■□□□ 1.98
APBB3-219ENST00000511896 RPRD2Q5VT52 1461 aaKnown RBP27.42■■□□□ 1.98
APBB3-219ENST00000511896 AFAP1Q8N556 730 aa27.36■■□□□ 1.97
APBB3-219ENST00000511896 DUOX2Q9NRD8 1548 aa27.35■■□□□ 1.97
APBB3-219ENST00000511896 L3MBTL2Q969R5 705 aa27.35■■□□□ 1.97
APBB3-219ENST00000511896 SPAG9O60271 1321 aaKnown RBP27.34■■□□□ 1.97
APBB3-219ENST00000511896 RTEL1-TNFRSF6BF6WH68 1400 aa27.33■■□□□ 1.97
APBB3-219ENST00000511896 ADGRL1O94910 1474 aa27.31■■□□□ 1.96
APBB3-219ENST00000511896 ERBINQ96RT1 1412 aa27.31■■□□□ 1.96
APBB3-219ENST00000511896 UNC13BO14795 1591 aa27.29■■□□□ 1.96
APBB3-219ENST00000511896 CYB5RLQ6IPT4 315 aa27.29■■□□□ 1.96
APBB3-219ENST00000511896 TEX14Q8IWB6 1497 aa27.29■■□□□ 1.96
APBB3-219ENST00000511896 SCAPERQ9BY12 1400 aa27.29■■□□□ 1.96
APBB3-219ENST00000511896 FAM135AQ9P2D6 1515 aa27.29■■□□□ 1.96
APBB3-219ENST00000511896 ZFYVE16Q7Z3T8 1539 aa27.28■■□□□ 1.96
APBB3-219ENST00000511896 CD109Q6YHK3 1445 aa27.28■■□□□ 1.96
APBB3-219ENST00000511896 RIMBP3CA6NJZ7 1639 aa27.26■■□□□ 1.96
APBB3-219ENST00000511896 RIMBP3BA6NNM3 1639 aa27.26■■□□□ 1.96
APBB3-219ENST00000511896 RIMBP3Q9UFD9 1639 aa27.26■■□□□ 1.96
APBB3-219ENST00000511896 MIER1Q8N108 512 aa27.26■■□□□ 1.95
APBB3-219ENST00000511896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.22■■□□□ 1.95
APBB3-219ENST00000511896 INO80Q9ULG1 1556 aaPredicted RBP27.21■■□□□ 1.95
APBB3-219ENST00000511896 MAGI2Q86UL8 1455 aa27.21■■□□□ 1.95
APBB3-219ENST00000511896 ATP7AQ04656 1500 aa27.21■■□□□ 1.95
APBB3-219ENST00000511896 IQGAP3Q86VI3 1631 aa27.2■■□□□ 1.94
APBB3-219ENST00000511896 HIRIP3Q9BW71 556 aaPredicted RBP27.19■■□□□ 1.94
APBB3-219ENST00000511896 CFAP74Q9C0B2 1584 aa27.16■■□□□ 1.94
APBB3-219ENST00000511896 NBPF8Q3BBV2 869 aa27.15■■□□□ 1.94
APBB3-219ENST00000511896 ZNF518AQ6AHZ1 1483 aa27.15■■□□□ 1.94
APBB3-219ENST00000511896 MYT1LQ9UL68 1186 aa27.11■■□□□ 1.93
APBB3-219ENST00000511896 POGZQ7Z3K3 1410 aa27.09■■□□□ 1.93
APBB3-219ENST00000511896 KIDINS220Q9ULH0 1771 aa27.08■■□□□ 1.93
APBB3-219ENST00000511896 DHX29Q7Z478 1369 aaKnown RBP27.08■■□□□ 1.93
APBB3-219ENST00000511896 PLA2R1Q13018 1463 aa27.08■■□□□ 1.93
APBB3-219ENST00000511896 NEO1Q92859 1461 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms