RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 ABCC5O15440 1437 aa18.56■□□□□ 0.56
PRDM16-205ENST00000509860 CLSPNQ9HAW4 1339 aa18.56■□□□□ 0.56
PRDM16-205ENST00000509860 DENND4BO75064 1496 aaPredicted RBP18.55■□□□□ 0.56
PRDM16-205ENST00000509860 PREX2Q70Z35 1606 aa18.54■□□□□ 0.56
PRDM16-205ENST00000509860 AKNAQ7Z591 1439 aa18.54■□□□□ 0.56
PRDM16-205ENST00000509860 UHRF1BP1LA0JNW5 1464 aa18.53■□□□□ 0.56
PRDM16-205ENST00000509860 ADGBQ8N7X0 1667 aa18.52■□□□□ 0.56
PRDM16-205ENST00000509860 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.51■□□□□ 0.55
PRDM16-205ENST00000509860 KDM5BQ9UGL1 1544 aa18.5■□□□□ 0.55
PRDM16-205ENST00000509860 CDK11AQ9UQ88 783 aaPredicted RBP18.5■□□□□ 0.55
PRDM16-205ENST00000509860 SAMD9LQ8IVG5 1584 aa18.5■□□□□ 0.55
PRDM16-205ENST00000509860 CHIC2Q9UKJ5 165 aa18.45■□□□□ 0.54
PRDM16-205ENST00000509860 ROCK1Q13464 1354 aa18.44■□□□□ 0.54
PRDM16-205ENST00000509860 MYO5CQ9NQX4 1742 aa18.44■□□□□ 0.54
PRDM16-205ENST00000509860 PLEKHD1A6NEE1 506 aa18.43■□□□□ 0.54
PRDM16-205ENST00000509860 ADGRL2O95490 1459 aa18.43■□□□□ 0.54
PRDM16-205ENST00000509860 RRP7BPQ9NSQ0 103 aa18.43■□□□□ 0.54
PRDM16-205ENST00000509860 MBD5Q9P267 1494 aa18.42■□□□□ 0.54
PRDM16-205ENST00000509860 ARHGEF5Q12774 1597 aa18.41■□□□□ 0.54
PRDM16-205ENST00000509860 CFDP1Q9UEE9 299 aaPredicted RBP18.4■□□□□ 0.54
PRDM16-205ENST00000509860 NCOA1Q15788 1441 aa18.38■□□□□ 0.53
PRDM16-205ENST00000509860 SHANK2Q9UPX8 1470 aa18.37■□□□□ 0.53
PRDM16-205ENST00000509860 SIN3AQ96ST3 1273 aa18.37■□□□□ 0.53
PRDM16-205ENST00000509860 SYCP2Q9BX26 1530 aa18.34■□□□□ 0.53
PRDM16-205ENST00000509860 ARHGEF12Q9NZN5 1544 aa18.34■□□□□ 0.53
PRDM16-205ENST00000509860 ZNF777Q9ULD5 760 aaPredicted RBP18.31■□□□□ 0.52
PRDM16-205ENST00000509860 ARHGAP5Q13017 1502 aa18.3■□□□□ 0.52
PRDM16-205ENST00000509860 PZPP20742 1482 aa18.3■□□□□ 0.52
PRDM16-205ENST00000509860 MAST1Q9Y2H9 1570 aa18.3■□□□□ 0.52
PRDM16-205ENST00000509860 C9orf84Q5VXU9 1444 aa18.3■□□□□ 0.52
PRDM16-205ENST00000509860 OSCARQ8IYS5 282 aa18.3■□□□□ 0.52
PRDM16-205ENST00000509860 ABCA9Q8IUA7 1624 aa18.29■□□□□ 0.52
PRDM16-205ENST00000509860 WDR7Q9Y4E6 1490 aa18.28■□□□□ 0.52
PRDM16-205ENST00000509860 SCAF1Q9H7N4 1312 aaKnown RBP18.28■□□□□ 0.52
PRDM16-205ENST00000509860 ABCC1P33527 1531 aa18.27■□□□□ 0.52
PRDM16-205ENST00000509860 ZNF316A6NFI3 1004 aaPredicted RBP18.27■□□□□ 0.51
PRDM16-205ENST00000509860 CCDC141Q6ZP82 1450 aa18.27■□□□□ 0.51
PRDM16-205ENST00000509860 PLCH2O75038 1416 aa18.26■□□□□ 0.51
PRDM16-205ENST00000509860 HNRNPMP52272 730 aaKnown RBP eCLIP18.26■□□□□ 0.51
PRDM16-205ENST00000509860 PRKCSHP14314 528 aaPredicted RBP18.24■□□□□ 0.51
PRDM16-205ENST00000509860 PLXNC1O60486 1568 aa18.24■□□□□ 0.51
PRDM16-205ENST00000509860 ARAP3Q8WWN8 1544 aa18.23■□□□□ 0.51
PRDM16-205ENST00000509860 KDM5DQ9BY66 1539 aa18.22■□□□□ 0.51
PRDM16-205ENST00000509860 NEUROD1Q13562 356 aa18.21■□□□□ 0.51
PRDM16-205ENST00000509860 ASXL2Q76L83 1435 aa18.21■□□□□ 0.51
PRDM16-205ENST00000509860 KIAA1107Q9UPP5 1409 aa18.21■□□□□ 0.51
PRDM16-205ENST00000509860 KCNH8Q96L42 1107 aa18.21■□□□□ 0.51
PRDM16-205ENST00000509860 MPHOSPH9Q99550 1183 aa18.21■□□□□ 0.51
PRDM16-205ENST00000509860 ANKRD30AQ9BXX3 1397 aa18.2■□□□□ 0.5
PRDM16-205ENST00000509860 ANKRD50Q9ULJ7 1429 aa18.19■□□□□ 0.5
PRDM16-205ENST00000509860 FOXD1Q16676 465 aa18.19■□□□□ 0.5
PRDM16-205ENST00000509860 ANKRD30BQ9BXX2 1392 aa18.17■□□□□ 0.5
PRDM16-205ENST00000509860 UNC13BO14795 1591 aa18.17■□□□□ 0.5
PRDM16-205ENST00000509860 TRAPPC8Q9Y2L5 1435 aa18.16■□□□□ 0.5
PRDM16-205ENST00000509860 RIMBP3CA6NJZ7 1639 aa18.16■□□□□ 0.5
PRDM16-205ENST00000509860 RIMBP3BA6NNM3 1639 aa18.16■□□□□ 0.5
PRDM16-205ENST00000509860 RIMBP3Q9UFD9 1639 aa18.16■□□□□ 0.5
PRDM16-205ENST00000509860 KIF15Q9NS87 1388 aa18.16■□□□□ 0.5
PRDM16-205ENST00000509860 DIEXFQ68CQ4 756 aaKnown RBP18.15■□□□□ 0.5
PRDM16-205ENST00000509860 PLEKHH2Q8IVE3 1493 aa18.14■□□□□ 0.49
PRDM16-205ENST00000509860 TRIM52Q96A61 297 aa18.14■□□□□ 0.49
PRDM16-205ENST00000509860 ZFYVE16Q7Z3T8 1539 aa18.14■□□□□ 0.49
PRDM16-205ENST00000509860 TEX14Q8IWB6 1497 aa18.13■□□□□ 0.49
PRDM16-205ENST00000509860 PPP1R15AO75807 674 aaPredicted RBP18.13■□□□□ 0.49
PRDM16-205ENST00000509860 INO80Q9ULG1 1556 aaPredicted RBP18.12■□□□□ 0.49
PRDM16-205ENST00000509860 TIMELESSQ9UNS1 1208 aa18.12■□□□□ 0.49
PRDM16-205ENST00000509860 RPRD2Q5VT52 1461 aaKnown RBP18.12■□□□□ 0.49
PRDM16-205ENST00000509860 MAGI2Q86UL8 1455 aa18.1■□□□□ 0.49
PRDM16-205ENST00000509860 FANCAO15360 1455 aa18.09■□□□□ 0.49
PRDM16-205ENST00000509860 IQGAP3Q86VI3 1631 aa18.08■□□□□ 0.49
PRDM16-205ENST00000509860 FAM135AQ9P2D6 1515 aa18.07■□□□□ 0.48
PRDM16-205ENST00000509860 DUOX2Q9NRD8 1548 aa18.06■□□□□ 0.48
PRDM16-205ENST00000509860 TSPY4P0CV99 314 aa18.06■□□□□ 0.48
PRDM16-205ENST00000509860 TSPY10P0CW01 314 aa18.06■□□□□ 0.48
PRDM16-205ENST00000509860 RSPH4AQ5TD94 716 aa18.06■□□□□ 0.48
PRDM16-205ENST00000509860 TONSLQ96HA7 1378 aa18.05■□□□□ 0.48
PRDM16-205ENST00000509860 DEPDC5O75140 1603 aa18.05■□□□□ 0.48
PRDM16-205ENST00000509860 SLC4A1APQ9BWU0 796 aaKnown RBP18.04■□□□□ 0.48
PRDM16-205ENST00000509860 KIDINS220Q9ULH0 1771 aa18.04■□□□□ 0.48
PRDM16-205ENST00000509860 EFCAB2Q5VUJ9 269 aa18.04■□□□□ 0.48
PRDM16-205ENST00000509860 MAP3K4Q9Y6R4 1608 aa18.03■□□□□ 0.48
PRDM16-205ENST00000509860 ERBINQ96RT1 1412 aa18.02■□□□□ 0.47
PRDM16-205ENST00000509860 ATP7AQ04656 1500 aa18.01■□□□□ 0.47
PRDM16-205ENST00000509860 NUP155O75694 1391 aa18.01■□□□□ 0.47
PRDM16-205ENST00000509860 ADGRL1O94910 1474 aa18.01■□□□□ 0.47
PRDM16-205ENST00000509860 ACIN1Q9UKV3 1341 aaKnown RBP18■□□□□ 0.47
PRDM16-205ENST00000509860 RTEL1-TNFRSF6BF6WH68 1400 aa18■□□□□ 0.47
PRDM16-205ENST00000509860 MROH1Q8NDA8 1641 aa18■□□□□ 0.47
PRDM16-205ENST00000509860 AFAP1Q8N556 730 aa17.99■□□□□ 0.47
PRDM16-205ENST00000509860 KDM5CP41229 1560 aa17.99■□□□□ 0.47
PRDM16-205ENST00000509860 PKD2Q13563 968 aa17.98■□□□□ 0.47
PRDM16-205ENST00000509860 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
PRDM16-205ENST00000509860 PLA2R1Q13018 1463 aa17.98■□□□□ 0.47
PRDM16-205ENST00000509860 CFAP74Q9C0B2 1584 aa17.98■□□□□ 0.47
PRDM16-205ENST00000509860 L3MBTL2Q969R5 705 aa17.97■□□□□ 0.47
PRDM16-205ENST00000509860 YTHDC1Q96MU7 727 aaKnown RBP17.97■□□□□ 0.47
PRDM16-205ENST00000509860 E9PCH4 1651 aa17.96■□□□□ 0.47
PRDM16-205ENST00000509860 SCAPERQ9BY12 1400 aa17.96■□□□□ 0.46
PRDM16-205ENST00000509860 VWDEQ8N2E2 1590 aa17.96■□□□□ 0.46
PRDM16-205ENST00000509860 PPRC1Q5VV67 1664 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms