RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 SIN3AQ96ST3 1273 aa25.64■■□□□ 1.69
SFXN1-208ENST00000507823 PLEKHD1A6NEE1 506 aa25.62■■□□□ 1.69
SFXN1-208ENST00000507823 CROCC2H7BZ55 1655 aa25.62■■□□□ 1.69
SFXN1-208ENST00000507823 RRP7BPQ9NSQ0 103 aa25.61■■□□□ 1.69
SFXN1-208ENST00000507823 ZNF644Q9H582 1327 aaPredicted RBP25.6■■□□□ 1.69
SFXN1-208ENST00000507823 DENND4BO75064 1496 aaPredicted RBP25.6■■□□□ 1.69
SFXN1-208ENST00000507823 CHIC2Q9UKJ5 165 aa25.6■■□□□ 1.69
SFXN1-208ENST00000507823 ADGRL2O95490 1459 aa25.59■■□□□ 1.69
SFXN1-208ENST00000507823 ADGBQ8N7X0 1667 aa25.59■■□□□ 1.69
SFXN1-208ENST00000507823 CFDP1Q9UEE9 299 aaPredicted RBP25.58■■□□□ 1.69
SFXN1-208ENST00000507823 ERCC6L2Q5T890 1561 aa25.57■■□□□ 1.68
SFXN1-208ENST00000507823 ABCC2Q92887 1545 aa25.55■■□□□ 1.68
SFXN1-208ENST00000507823 NEUROD1Q13562 356 aa25.52■■□□□ 1.68
SFXN1-208ENST00000507823 PPP1R15AO75807 674 aaPredicted RBP25.52■■□□□ 1.68
SFXN1-208ENST00000507823 SHANK2Q9UPX8 1470 aa25.52■■□□□ 1.68
SFXN1-208ENST00000507823 NCOA1Q15788 1441 aa25.51■■□□□ 1.67
SFXN1-208ENST00000507823 UHRF1BP1LA0JNW5 1464 aa25.49■■□□□ 1.67
SFXN1-208ENST00000507823 PREX2Q70Z35 1606 aa25.48■■□□□ 1.67
SFXN1-208ENST00000507823 ARHGEF5Q12774 1597 aa25.48■■□□□ 1.67
SFXN1-208ENST00000507823 KDM5BQ9UGL1 1544 aa25.47■■□□□ 1.67
SFXN1-208ENST00000507823 TONSLQ96HA7 1378 aa25.44■■□□□ 1.66
SFXN1-208ENST00000507823 MPHOSPH9Q99550 1183 aa25.44■■□□□ 1.66
SFXN1-208ENST00000507823 CDC42BPBQ9Y5S2 1711 aa25.44■■□□□ 1.66
SFXN1-208ENST00000507823 MIER1Q8N108 512 aa25.42■■□□□ 1.66
SFXN1-208ENST00000507823 ANKRD30AQ9BXX3 1397 aa25.4■■□□□ 1.66
SFXN1-208ENST00000507823 MBD5Q9P267 1494 aa25.4■■□□□ 1.66
SFXN1-208ENST00000507823 TRIM52Q96A61 297 aa25.39■■□□□ 1.66
SFXN1-208ENST00000507823 SAMD9LQ8IVG5 1584 aa25.38■■□□□ 1.65
SFXN1-208ENST00000507823 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.37■■□□□ 1.65
SFXN1-208ENST00000507823 TTC37Q6PGP7 1564 aa25.36■■□□□ 1.65
SFXN1-208ENST00000507823 PZPP20742 1482 aa25.36■■□□□ 1.65
SFXN1-208ENST00000507823 ZNF777Q9ULD5 760 aaPredicted RBP25.36■■□□□ 1.65
SFXN1-208ENST00000507823 C9orf84Q5VXU9 1444 aa25.36■■□□□ 1.65
SFXN1-208ENST00000507823 ANKRD30BQ9BXX2 1392 aa25.36■■□□□ 1.65
SFXN1-208ENST00000507823 ZCCHC11Q5TAX3 1644 aaKnown RBP25.35■■□□□ 1.65
SFXN1-208ENST00000507823 MYO5CQ9NQX4 1742 aa25.31■■□□□ 1.64
SFXN1-208ENST00000507823 CCDC141Q6ZP82 1450 aa25.3■■□□□ 1.64
SFXN1-208ENST00000507823 MAST1Q9Y2H9 1570 aa25.3■■□□□ 1.64
SFXN1-208ENST00000507823 ANKRD50Q9ULJ7 1429 aa25.3■■□□□ 1.64
SFXN1-208ENST00000507823 RSPH4AQ5TD94 716 aa25.3■■□□□ 1.64
SFXN1-208ENST00000507823 RPRD2Q5VT52 1461 aaKnown RBP25.3■■□□□ 1.64
SFXN1-208ENST00000507823 KDM5DQ9BY66 1539 aa25.3■■□□□ 1.64
SFXN1-208ENST00000507823 KIAA1107Q9UPP5 1409 aa25.27■■□□□ 1.64
SFXN1-208ENST00000507823 PLEKHH2Q8IVE3 1493 aa25.26■■□□□ 1.63
SFXN1-208ENST00000507823 ARHGAP5Q13017 1502 aa25.23■■□□□ 1.63
SFXN1-208ENST00000507823 CENPBP07199 599 aaPredicted RBP25.23■■□□□ 1.63
SFXN1-208ENST00000507823 TSPY4P0CV99 314 aa25.23■■□□□ 1.63
SFXN1-208ENST00000507823 TSPY10P0CW01 314 aa25.23■■□□□ 1.63
SFXN1-208ENST00000507823 SLC4A1APQ9BWU0 796 aaKnown RBP25.22■■□□□ 1.63
SFXN1-208ENST00000507823 TEX14Q8IWB6 1497 aa25.22■■□□□ 1.63
SFXN1-208ENST00000507823 SYCP2Q9BX26 1530 aa25.21■■□□□ 1.63
SFXN1-208ENST00000507823 HNRNPMP52272 730 aaKnown RBP eCLIP25.2■■□□□ 1.63
SFXN1-208ENST00000507823 PLCH2O75038 1416 aa25.2■■□□□ 1.62
SFXN1-208ENST00000507823 ARAP3Q8WWN8 1544 aa25.19■■□□□ 1.62
SFXN1-208ENST00000507823 KIF15Q9NS87 1388 aa25.19■■□□□ 1.62
SFXN1-208ENST00000507823 PLXNC1O60486 1568 aa25.18■■□□□ 1.62
SFXN1-208ENST00000507823 FOXD1Q16676 465 aa25.17■■□□□ 1.62
SFXN1-208ENST00000507823 L3MBTL2Q969R5 705 aa25.13■■□□□ 1.61
SFXN1-208ENST00000507823 ARHGEF12Q9NZN5 1544 aa25.11■■□□□ 1.61
SFXN1-208ENST00000507823 ABCC1P33527 1531 aa25.11■■□□□ 1.61
SFXN1-208ENST00000507823 UNC13BO14795 1591 aa25.09■■□□□ 1.61
SFXN1-208ENST00000507823 WDR7Q9Y4E6 1490 aa25.09■■□□□ 1.61
SFXN1-208ENST00000507823 NUP155O75694 1391 aa25.08■■□□□ 1.61
SFXN1-208ENST00000507823 SCAF1Q9H7N4 1312 aaKnown RBP25.08■■□□□ 1.6
SFXN1-208ENST00000507823 PKD2Q13563 968 aa25.06■■□□□ 1.6
SFXN1-208ENST00000507823 EFCAB2Q5VUJ9 269 aa25.05■■□□□ 1.6
SFXN1-208ENST00000507823 ABCA9Q8IUA7 1624 aa25.05■■□□□ 1.6
SFXN1-208ENST00000507823 KCNH8Q96L42 1107 aa25.04■■□□□ 1.6
SFXN1-208ENST00000507823 DUOX2Q9NRD8 1548 aa25.03■■□□□ 1.6
SFXN1-208ENST00000507823 FAM135AQ9P2D6 1515 aa25.02■■□□□ 1.6
SFXN1-208ENST00000507823 DDX10Q13206 875 aaKnown RBP25.01■■□□□ 1.59
SFXN1-208ENST00000507823 MAGI2Q86UL8 1455 aa25.01■■□□□ 1.59
SFXN1-208ENST00000507823 OSCARQ8IYS5 282 aa25■■□□□ 1.59
SFXN1-208ENST00000507823 ERBINQ96RT1 1412 aa24.99■■□□□ 1.59
SFXN1-208ENST00000507823 IQGAP3Q86VI3 1631 aa24.98■■□□□ 1.59
SFXN1-208ENST00000507823 HIRIP3Q9BW71 556 aaPredicted RBP24.98■■□□□ 1.59
SFXN1-208ENST00000507823 NBPF8Q3BBV2 869 aa24.98■■□□□ 1.59
SFXN1-208ENST00000507823 RTEL1-TNFRSF6BF6WH68 1400 aa24.97■■□□□ 1.59
SFXN1-208ENST00000507823 HSPA5P11021 654 aaKnown RBP24.96■■□□□ 1.59
SFXN1-208ENST00000507823 TRAPPC8Q9Y2L5 1435 aa24.95■■□□□ 1.59
SFXN1-208ENST00000507823 EIF4G2P78344 907 aaKnown RBP eCLIP24.95■■□□□ 1.58
SFXN1-208ENST00000507823 YTHDC1Q96MU7 727 aaKnown RBP24.95■■□□□ 1.58
SFXN1-208ENST00000507823 UHRF1BP1Q6BDS2 1440 aa24.95■■□□□ 1.58
SFXN1-208ENST00000507823 SPATA31E1Q6ZUB1 1445 aa24.94■■□□□ 1.58
SFXN1-208ENST00000507823 ASXL2Q76L83 1435 aa24.92■■□□□ 1.58
SFXN1-208ENST00000507823 ZFYVE16Q7Z3T8 1539 aa24.91■■□□□ 1.58
SFXN1-208ENST00000507823 POLR1AO95602 1720 aaPredicted RBP24.88■■□□□ 1.57
SFXN1-208ENST00000507823 FANCAO15360 1455 aa24.88■■□□□ 1.57
SFXN1-208ENST00000507823 INO80Q9ULG1 1556 aaPredicted RBP24.87■■□□□ 1.57
SFXN1-208ENST00000507823 ATP10AO60312 1499 aa24.87■■□□□ 1.57
SFXN1-208ENST00000507823 WASHC2AQ641Q2 1341 aa24.86■■□□□ 1.57
SFXN1-208ENST00000507823 CCER2I3L3R5 266 aa24.85■■□□□ 1.57
SFXN1-208ENST00000507823 PLA2R1Q13018 1463 aa24.84■■□□□ 1.57
SFXN1-208ENST00000507823 RALGAPBQ86X10 1494 aa24.83■■□□□ 1.57
SFXN1-208ENST00000507823 DEPDC5O75140 1603 aa24.82■■□□□ 1.56
SFXN1-208ENST00000507823 SPAG9O60271 1321 aaKnown RBP24.81■■□□□ 1.56
SFXN1-208ENST00000507823 ATP7AQ04656 1500 aa24.8■■□□□ 1.56
SFXN1-208ENST00000507823 ANP32CO43423 234 aa24.79■■□□□ 1.56
SFXN1-208ENST00000507823 CCDC7Q96M83 1385 aa24.78■■□□□ 1.56
SFXN1-208ENST00000507823 KDM5CP41229 1560 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms