RNA–Protein interactions for RNA: ENST00000507528.5

PDCD6-206, Transcript of programmed cell death 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDCD6, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-206ENST00000507528 MYO5CQ9NQX4 1742 aa31.82■■■□□ 2.68
PDCD6-206ENST00000507528 PLPPR3Q6T4P5 718 aa31.78■■■□□ 2.68
PDCD6-206ENST00000507528 FMN1Q68DA7 1419 aa31.77■■■□□ 2.68
PDCD6-206ENST00000507528 ARHGEF12Q9NZN5 1544 aa31.77■■■□□ 2.68
PDCD6-206ENST00000507528 ATP10AO60312 1499 aa31.77■■■□□ 2.68
PDCD6-206ENST00000507528 MLECQ14165 292 aa31.76■■■□□ 2.67
PDCD6-206ENST00000507528 C9orf84Q5VXU9 1444 aa31.74■■■□□ 2.67
PDCD6-206ENST00000507528 ARHGAP35Q9NRY4 1499 aa31.73■■■□□ 2.67
PDCD6-206ENST00000507528 EFCAB2Q5VUJ9 269 aa31.73■■■□□ 2.67
PDCD6-206ENST00000507528 KIF14Q15058 1648 aa31.73■■■□□ 2.67
PDCD6-206ENST00000507528 PREX1Q8TCU6 1659 aa31.69■■■□□ 2.66
PDCD6-206ENST00000507528 ATP1B4Q9UN42 357 aaPredicted RBP31.68■■■□□ 2.66
PDCD6-206ENST00000507528 CDK11AQ9UQ88 783 aaPredicted RBP31.68■■■□□ 2.66
PDCD6-206ENST00000507528 UBTFP17480 764 aaKnown RBP31.67■■■□□ 2.66
PDCD6-206ENST00000507528 ZNF518AQ6AHZ1 1483 aa31.66■■■□□ 2.66
PDCD6-206ENST00000507528 KDM5CP41229 1560 aa31.66■■■□□ 2.66
PDCD6-206ENST00000507528 LRRIQ1Q96JM4 1722 aa31.65■■■□□ 2.66
PDCD6-206ENST00000507528 TROQ12816 1431 aaPredicted RBP31.65■■■□□ 2.66
PDCD6-206ENST00000507528 ARHGAP5Q13017 1502 aa31.62■■■□□ 2.65
PDCD6-206ENST00000507528 CERKQ8TCT0 537 aa31.62■■■□□ 2.65
PDCD6-206ENST00000507528 EHMT2Q96KQ7 1210 aa31.6■■■□□ 2.65
PDCD6-206ENST00000507528 CDC42BPBQ9Y5S2 1711 aa31.58■■■□□ 2.65
PDCD6-206ENST00000507528 CLIP1P30622 1438 aa31.58■■■□□ 2.65
PDCD6-206ENST00000507528 REREQ9P2R6 1566 aa31.57■■■□□ 2.64
PDCD6-206ENST00000507528 DIP2CQ9Y2E4 1556 aa31.57■■■□□ 2.64
PDCD6-206ENST00000507528 AFAP1Q8N556 730 aa31.57■■■□□ 2.64
PDCD6-206ENST00000507528 CEBPAP49715 358 aaPredicted RBP31.56■■■□□ 2.64
PDCD6-206ENST00000507528 SETD1BQ9UPS6 1966 aaKnown RBP31.54■■■□□ 2.64
PDCD6-206ENST00000507528 STRCQ7RTU9 1775 aa31.54■■■□□ 2.64
PDCD6-206ENST00000507528 ABCA6Q8N139 1617 aa31.52■■■□□ 2.64
PDCD6-206ENST00000507528 MLH3Q9UHC1 1453 aa31.51■■■□□ 2.63
PDCD6-206ENST00000507528 PREX2Q70Z35 1606 aa31.49■■■□□ 2.63
PDCD6-206ENST00000507528 UHRF1BP1Q6BDS2 1440 aa31.47■■■□□ 2.63
PDCD6-206ENST00000507528 ABCC1P33527 1531 aa31.46■■■□□ 2.63
PDCD6-206ENST00000507528 C3P01024 1663 aa31.46■■■□□ 2.63
PDCD6-206ENST00000507528 ITSN2Q9NZM3 1697 aa31.44■■■□□ 2.62
PDCD6-206ENST00000507528 AGLP35573 1532 aa31.44■■■□□ 2.62
PDCD6-206ENST00000507528 MYT1LQ9UL68 1186 aa31.43■■■□□ 2.62
PDCD6-206ENST00000507528 DMRT2Q9Y5R5 561 aa31.43■■■□□ 2.62
PDCD6-206ENST00000507528 TRAPPC8Q9Y2L5 1435 aa31.41■■■□□ 2.62
PDCD6-206ENST00000507528 CCDC18Q5T9S5 1454 aa31.41■■■□□ 2.62
PDCD6-206ENST00000507528 CASKIN1Q8WXD9 1431 aa31.4■■■□□ 2.62
PDCD6-206ENST00000507528 CDC42BPAQ5VT25 1732 aa31.39■■■□□ 2.62
PDCD6-206ENST00000507528 KIDINS220Q9ULH0 1771 aa31.39■■■□□ 2.62
PDCD6-206ENST00000507528 CHIC1Q5VXU3 224 aa31.38■■■□□ 2.61
PDCD6-206ENST00000507528 PTPRTO14522 1441 aa31.32■■■□□ 2.61
PDCD6-206ENST00000507528 ESF1Q9H501 851 aaKnown RBP31.28■■■□□ 2.6
PDCD6-206ENST00000507528 CNTLNQ9NXG0 1405 aa31.28■■■□□ 2.6
PDCD6-206ENST00000507528 SAMD9LQ8IVG5 1584 aa31.26■■■□□ 2.6
PDCD6-206ENST00000507528 FYCO1Q9BQS8 1478 aa31.26■■■□□ 2.59
PDCD6-206ENST00000507528 MROH2AA6NES4 1674 aa31.24■■■□□ 2.59
PDCD6-206ENST00000507528 LTBP4Q8N2S1 1624 aa31.2■■■□□ 2.59
PDCD6-206ENST00000507528 NCOA1Q15788 1441 aa31.2■■■□□ 2.59
PDCD6-206ENST00000507528 SYCP2Q9BX26 1530 aa31.19■■■□□ 2.58
PDCD6-206ENST00000507528 GPATCH8Q9UKJ3 1502 aaKnown RBP31.19■■■□□ 2.58
PDCD6-206ENST00000507528 NPATQ14207 1427 aa31.17■■■□□ 2.58
PDCD6-206ENST00000507528 SUPT6HQ7KZ85 1726 aaKnown RBP31.16■■■□□ 2.58
PDCD6-206ENST00000507528 ZNF777Q9ULD5 760 aaPredicted RBP31.14■■■□□ 2.58
PDCD6-206ENST00000507528 SPAG9O60271 1321 aaKnown RBP31.13■■■□□ 2.57
PDCD6-206ENST00000507528 IQSEC2Q5JU85 1478 aa31.13■■■□□ 2.57
PDCD6-206ENST00000507528 ZMYM3Q14202 1370 aa31.12■■■□□ 2.57
PDCD6-206ENST00000507528 DISP3Q9P2K9 1392 aa31.12■■■□□ 2.57
PDCD6-206ENST00000507528 ATP7AQ04656 1500 aa31.12■■■□□ 2.57
PDCD6-206ENST00000507528 PLXNC1O60486 1568 aa31.12■■■□□ 2.57
PDCD6-206ENST00000507528 INO80Q9ULG1 1556 aaPredicted RBP31.12■■■□□ 2.57
PDCD6-206ENST00000507528 CAMSAP1Q5T5Y3 1602 aa31.12■■■□□ 2.57
PDCD6-206ENST00000507528 KIAA1107Q9UPP5 1409 aa31.11■■■□□ 2.57
PDCD6-206ENST00000507528 HNRNPMP52272 730 aaKnown RBP eCLIP31.1■■■□□ 2.572e-7■■■■■ 37.9
PDCD6-206ENST00000507528 CLTCQ00610 1675 aaKnown RBP31.09■■■□□ 2.57
PDCD6-206ENST00000507528 PLEKHH2Q8IVE3 1493 aa31.08■■■□□ 2.57
PDCD6-206ENST00000507528 ILDR2Q71H61 639 aa31.06■■■□□ 2.56
PDCD6-206ENST00000507528 ZNF142P52746 1687 aaPredicted RBP31.06■■■□□ 2.56
PDCD6-206ENST00000507528 A2MP01023 1474 aa31.04■■■□□ 2.56
PDCD6-206ENST00000507528 MYO3AQ8NEV4 1616 aa31.03■■■□□ 2.56
PDCD6-206ENST00000507528 CFDP1Q9UEE9 299 aaPredicted RBP31.03■■■□□ 2.56
PDCD6-206ENST00000507528 CCNB3Q8WWL7 1395 aa31■■■□□ 2.55
PDCD6-206ENST00000507528 SPATA31D1Q6ZQQ2 1576 aa31■■■□□ 2.55
PDCD6-206ENST00000507528 ADGBQ8N7X0 1667 aa30.99■■■□□ 2.55
PDCD6-206ENST00000507528 PTPRKQ15262 1439 aa30.98■■■□□ 2.55
PDCD6-206ENST00000507528 PLA2R1Q13018 1463 aa30.98■■■□□ 2.55
PDCD6-206ENST00000507528 CEP170BQ9Y4F5 1589 aaPredicted RBP30.97■■■□□ 2.55
PDCD6-206ENST00000507528 NCKAP5LQ9HCH0 1330 aa30.97■■■□□ 2.55
PDCD6-206ENST00000507528 SOCS7O14512 581 aa30.95■■■□□ 2.55
PDCD6-206ENST00000507528 TCOF1Q13428 1488 aaKnown RBP30.94■■■□□ 2.54
PDCD6-206ENST00000507528 MTUS2Q5JR59 1369 aa30.92■■■□□ 2.54
PDCD6-206ENST00000507528 GGT6Q6P531 493 aa30.92■■■□□ 2.54
PDCD6-206ENST00000507528 PPP6R1Q9UPN7 881 aa30.92■■■□□ 2.54
PDCD6-206ENST00000507528 TIAM1Q13009 1591 aa30.92■■■□□ 2.54
PDCD6-206ENST00000507528 PKD2Q13563 968 aa30.91■■■□□ 2.54
PDCD6-206ENST00000507528 ZNF335Q9H4Z2 1342 aaPredicted RBP30.91■■■□□ 2.54
PDCD6-206ENST00000507528 MBD5Q9P267 1494 aa30.89■■■□□ 2.54
PDCD6-206ENST00000507528 ZNF644Q9H582 1327 aaPredicted RBP30.86■■■□□ 2.53
PDCD6-206ENST00000507528 EHBP1L1Q8N3D4 1523 aa30.85■■■□□ 2.53
PDCD6-206ENST00000507528 RTEL1-TNFRSF6BF6WH68 1400 aa30.85■■■□□ 2.53
PDCD6-206ENST00000507528 DNMT1P26358 1616 aaKnown RBP30.83■■■□□ 2.53
PDCD6-206ENST00000507528 A2ML1A8K2U0 1454 aa30.82■■■□□ 2.52
PDCD6-206ENST00000507528 CEP162Q5TB80 1403 aa30.8■■■□□ 2.52
PDCD6-206ENST00000507528 DHX29Q7Z478 1369 aaKnown RBP30.79■■■□□ 2.52
PDCD6-206ENST00000507528 UBAP1LF5GYI3 381 aa30.78■■■□□ 2.52
PDCD6-206ENST00000507528 POLR1AO95602 1720 aaPredicted RBP30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms