RNA–Protein interactions for RNA: ENST00000507292.1

SRPK1-208, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-208ENST00000507292 NLRP6P59044 892 aa7.97□□□□□ -1.13
SRPK1-208ENST00000507292 DOK7Q18PE1 504 aa7.97□□□□□ -1.13
SRPK1-208ENST00000507292 FBXO22Q8NEZ5 403 aa7.95□□□□□ -1.14
SRPK1-208ENST00000507292 HOXB1P14653 301 aaPredicted RBP7.94□□□□□ -1.14
SRPK1-208ENST00000507292 MFRPQ9BY79 579 aa7.94□□□□□ -1.14
SRPK1-208ENST00000507292 KRTAP3-3Q9BYR6 98 aa7.92□□□□□ -1.14
SRPK1-208ENST00000507292 KRTAP3-2Q9BYR7 98 aa7.92□□□□□ -1.14
SRPK1-208ENST00000507292 RIMBP2O15034 1052 aa7.91□□□□□ -1.14
SRPK1-208ENST00000507292 ERBB3P21860 1342 aa7.91□□□□□ -1.14
SRPK1-208ENST00000507292 VARS2Q5ST30 1063 aaKnown RBP7.87□□□□□ -1.15
SRPK1-208ENST00000507292 GPR153Q6NV75 609 aa7.86□□□□□ -1.15
SRPK1-208ENST00000507292 ZSWIM6Q9HCJ5 1215 aa7.86□□□□□ -1.15
SRPK1-208ENST00000507292 ARSIQ5FYB1 569 aa7.85□□□□□ -1.15
SRPK1-208ENST00000507292 C2orf72A6NCS6 295 aa7.84□□□□□ -1.15
SRPK1-208ENST00000507292 PPP1R37O75864 691 aa7.83□□□□□ -1.16
SRPK1-208ENST00000507292 KHSRPQ92945 711 aaKnown RBP eCLIP7.83□□□□□ -1.161e-6■□□□□ 10.5
SRPK1-208ENST00000507292 KIF3CO14782 793 aa7.81□□□□□ -1.16
SRPK1-208ENST00000507292 TMC2Q8TDI7 906 aa7.79□□□□□ -1.16
SRPK1-208ENST00000507292 ZNF687Q8N1G0 1237 aa7.78□□□□□ -1.16
SRPK1-208ENST00000507292 CHGAP10645 457 aaKnown RBP7.77□□□□□ -1.17
SRPK1-208ENST00000507292 HS6ST3Q8IZP7 471 aa7.77□□□□□ -1.17
SRPK1-208ENST00000507292 ZNF316A6NFI3 1004 aaPredicted RBP7.76□□□□□ -1.17
SRPK1-208ENST00000507292 NUDT7P0C024 238 aa7.75□□□□□ -1.17
SRPK1-208ENST00000507292 PCDHGA4Q9Y5G9 962 aa7.74□□□□□ -1.17
SRPK1-208ENST00000507292 SLC34A2O95436 690 aa7.71□□□□□ -1.18
SRPK1-208ENST00000507292 ANKRD13DQ6ZTN6 518 aa7.71□□□□□ -1.18
SRPK1-208ENST00000507292 LHX6Q9UPM6 363 aa7.71□□□□□ -1.18
SRPK1-208ENST00000507292 NKX1-1Q15270 411 aaPredicted RBP7.69□□□□□ -1.18
SRPK1-208ENST00000507292 RNF166Q96A37 237 aaPredicted RBP7.69□□□□□ -1.18
SRPK1-208ENST00000507292 MYT1LQ9UL68 1186 aa7.69□□□□□ -1.18
SRPK1-208ENST00000507292 PLPP6Q8IY26 295 aa7.68□□□□□ -1.18
SRPK1-208ENST00000507292 GPHNQ9NQX3 736 aaPredicted RBP7.67□□□□□ -1.18
SRPK1-208ENST00000507292 AXIN2Q9Y2T1 843 aa7.67□□□□□ -1.18
SRPK1-208ENST00000507292 LSM11P83369 360 aaKnown RBP eCLIP7.66□□□□□ -1.18
SRPK1-208ENST00000507292 FOXK1P85037 733 aa7.66□□□□□ -1.18
SRPK1-208ENST00000507292 DSG2Q14126 1118 aa7.66□□□□□ -1.18
SRPK1-208ENST00000507292 POTEEQ6S8J3 1075 aa7.65□□□□□ -1.18
SRPK1-208ENST00000507292 PTCD2Q8WV60 388 aaKnown RBP7.64□□□□□ -1.19
SRPK1-208ENST00000507292 DNAJC5Q9H3Z4 198 aa7.64□□□□□ -1.19
SRPK1-208ENST00000507292 KDM4FA0A1W2PPD8 638 aa7.62□□□□□ -1.19
SRPK1-208ENST00000507292 PBX2P40425 430 aa7.62□□□□□ -1.19
SRPK1-208ENST00000507292 PTGER2P43116 358 aa7.62□□□□□ -1.19
SRPK1-208ENST00000507292 DCAF8L2P0C7V8 631 aa7.61□□□□□ -1.19
SRPK1-208ENST00000507292 RYDENQ9NUL5 291 aaKnown RBP7.6□□□□□ -1.19
SRPK1-208ENST00000507292 UPF1Q92900 1129 aaKnown RBP eCLIP7.59□□□□□ -1.19
SRPK1-208ENST00000507292 PSDA5PKW4 1024 aaPredicted RBP7.58□□□□□ -1.2
SRPK1-208ENST00000507292 ARHGAP33O14559 1287 aa7.58□□□□□ -1.2
SRPK1-208ENST00000507292 TBC1D12O60347 775 aa7.58□□□□□ -1.2
SRPK1-208ENST00000507292 PSEN2P49810 448 aa7.57□□□□□ -1.2
SRPK1-208ENST00000507292 CRISPLD2Q9H0B8 497 aa7.57□□□□□ -1.2
SRPK1-208ENST00000507292 GTPBP6O43824 516 aaPredicted RBP7.56□□□□□ -1.2
SRPK1-208ENST00000507292 PPP1R15BQ5SWA1 713 aa7.56□□□□□ -1.2
SRPK1-208ENST00000507292 ADGRD1Q6QNK2 874 aa7.56□□□□□ -1.2
SRPK1-208ENST00000507292 NCKAP5LQ9HCH0 1330 aa7.55□□□□□ -1.2
SRPK1-208ENST00000507292 PPP4R3BQ5MIZ7 849 aa7.55□□□□□ -1.2
SRPK1-208ENST00000507292 DMRTA1Q5VZB9 504 aa7.55□□□□□ -1.2
SRPK1-208ENST00000507292 OXER1Q8TDS5 423 aa7.55□□□□□ -1.2
SRPK1-208ENST00000507292 PDE4AP27815 886 aa7.53□□□□□ -1.2
SRPK1-208ENST00000507292 KCNK17Q96T54 332 aa7.52□□□□□ -1.21
SRPK1-208ENST00000507292 LARP6Q9BRS8 491 aaKnown RBP7.52□□□□□ -1.21
SRPK1-208ENST00000507292 ZNF454Q8N9F8 522 aa7.5□□□□□ -1.21
SRPK1-208ENST00000507292 TK2O00142 265 aa7.49□□□□□ -1.21
SRPK1-208ENST00000507292 DDX27Q96GQ7 796 aaKnown RBP7.49□□□□□ -1.21
SRPK1-208ENST00000507292 HRO43593 1189 aa7.48□□□□□ -1.21
SRPK1-208ENST00000507292 KCNH8Q96L42 1107 aa7.48□□□□□ -1.21
SRPK1-208ENST00000507292 CADPS2Q86UW7 1296 aa7.47□□□□□ -1.21
SRPK1-208ENST00000507292 EVI5O60447 810 aa7.46□□□□□ -1.22
SRPK1-208ENST00000507292 FOSBP53539 338 aa7.46□□□□□ -1.22
SRPK1-208ENST00000507292 STAC3Q96MF2 364 aa7.46□□□□□ -1.22
SRPK1-208ENST00000507292 HCSTQ9UBK5 93 aa7.46□□□□□ -1.22
SRPK1-208ENST00000507292 MAP3K9P80192 1104 aa7.45□□□□□ -1.22
SRPK1-208ENST00000507292 KCTD12Q96CX2 325 aaKnown RBP7.45□□□□□ -1.22
SRPK1-208ENST00000507292 BCL2L12Q9HB09 334 aa7.45□□□□□ -1.22
SRPK1-208ENST00000507292 MFSD10Q14728 455 aa7.44□□□□□ -1.22
SRPK1-208ENST00000507292 ANO8Q9HCE9 1232 aaPredicted RBP7.44□□□□□ -1.22
SRPK1-208ENST00000507292 EMILIN3Q9NT22 766 aa7.44□□□□□ -1.22
SRPK1-208ENST00000507292 VPS9D1Q9Y2B5 631 aa7.44□□□□□ -1.22
SRPK1-208ENST00000507292 PTPREP23469 700 aa7.42□□□□□ -1.22
SRPK1-208ENST00000507292 JPH4Q96JJ6 628 aa7.42□□□□□ -1.22
SRPK1-208ENST00000507292 ADAM33Q9BZ11 813 aa7.42□□□□□ -1.22
SRPK1-208ENST00000507292 PLA2G2EQ9NZK7 142 aa7.42□□□□□ -1.22
SRPK1-208ENST00000507292 ZDHHC16Q969W1 377 aa7.41□□□□□ -1.22
SRPK1-208ENST00000507292 ZBED2Q9BTP6 218 aa7.39□□□□□ -1.23
SRPK1-208ENST00000507292 PTPN5P54829 565 aa7.38□□□□□ -1.23
SRPK1-208ENST00000507292 SLC4A5Q9BY07 1137 aa7.37□□□□□ -1.23
SRPK1-208ENST00000507292 PCDHGA10Q9Y5H3 936 aa7.37□□□□□ -1.23
SRPK1-208ENST00000507292 BHMG1C9JSJ3 638 aaPredicted RBP7.36□□□□□ -1.23
SRPK1-208ENST00000507292 GOLGA8CPA6NN73 597 aa7.35□□□□□ -1.23
SRPK1-208ENST00000507292 BBXQ8WY36 941 aaPredicted RBP7.35□□□□□ -1.23
SRPK1-208ENST00000507292 DPYSL4O14531 572 aa7.34□□□□□ -1.23
SRPK1-208ENST00000507292 MRPL50Q8N5N7 158 aaKnown RBP7.34□□□□□ -1.23
SRPK1-208ENST00000507292 COL9A1P20849 921 aa7.33□□□□□ -1.24
SRPK1-208ENST00000507292 CAMK2BQ13554 666 aa7.33□□□□□ -1.24
SRPK1-208ENST00000507292 WNT2BQ93097 391 aa7.33□□□□□ -1.24
SRPK1-208ENST00000507292 PPP1R3GB7ZBB8 358 aa7.32□□□□□ -1.24
SRPK1-208ENST00000507292 PHF14O94880 888 aa7.32□□□□□ -1.24
SRPK1-208ENST00000507292 PROX2Q3B8N5 592 aa7.32□□□□□ -1.24
SRPK1-208ENST00000507292 TYW1BQ6NUM6 668 aa7.32□□□□□ -1.24
SRPK1-208ENST00000507292 THSD4Q6ZMP0 1018 aa7.32□□□□□ -1.24
SRPK1-208ENST00000507292 FBXW7Q969H0 707 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 343.5 ms