RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 ROCK1Q13464 1354 aa32.27■■■□□ 2.76
RNF4-207ENST00000506706 SIN3AQ96ST3 1273 aa32.25■■■□□ 2.75
RNF4-207ENST00000506706 ABCC10Q5T3U5 1492 aa32.25■■■□□ 2.75
RNF4-207ENST00000506706 TIMELESSQ9UNS1 1208 aa32.23■■■□□ 2.75
RNF4-207ENST00000506706 NEUROD1Q13562 356 aa32.22■■■□□ 2.75
RNF4-207ENST00000506706 CDC42BPAQ5VT25 1732 aa32.21■■■□□ 2.75
RNF4-207ENST00000506706 ABCC2Q92887 1545 aa32.18■■■□□ 2.74
RNF4-207ENST00000506706 KDM6BO15054 1643 aa32.18■■■□□ 2.74
RNF4-207ENST00000506706 ZNF777Q9ULD5 760 aaPredicted RBP32.16■■■□□ 2.74
RNF4-207ENST00000506706 ACIN1Q9UKV3 1341 aaKnown RBP32.16■■■□□ 2.74
RNF4-207ENST00000506706 CROCC2H7BZ55 1655 aa32.11■■■□□ 2.73
RNF4-207ENST00000506706 TRIM52Q96A61 297 aa32.11■■■□□ 2.73
RNF4-207ENST00000506706 ADGBQ8N7X0 1667 aa32.1■■■□□ 2.73
RNF4-207ENST00000506706 ADGRL2O95490 1459 aa32.05■■■□□ 2.72
RNF4-207ENST00000506706 UHRF1BP1LA0JNW5 1464 aa32.04■■■□□ 2.72
RNF4-207ENST00000506706 NCOA1Q15788 1441 aa32.03■■■□□ 2.72
RNF4-207ENST00000506706 PREX2Q70Z35 1606 aa32.01■■■□□ 2.71
RNF4-207ENST00000506706 DENND4BO75064 1496 aaPredicted RBP32.01■■■□□ 2.71
RNF4-207ENST00000506706 TONSLQ96HA7 1378 aa32■■■□□ 2.71
RNF4-207ENST00000506706 MPHOSPH9Q99550 1183 aa31.99■■■□□ 2.71
RNF4-207ENST00000506706 PPP1R15AO75807 674 aaPredicted RBP31.98■■■□□ 2.71
RNF4-207ENST00000506706 SHANK2Q9UPX8 1470 aa31.98■■■□□ 2.71
RNF4-207ENST00000506706 CDC42BPBQ9Y5S2 1711 aa31.98■■■□□ 2.71
RNF4-207ENST00000506706 ANKRD30AQ9BXX3 1397 aa31.98■■■□□ 2.71
RNF4-207ENST00000506706 ZCCHC11Q5TAX3 1644 aaKnown RBP31.96■■■□□ 2.71
RNF4-207ENST00000506706 ARHGEF5Q12774 1597 aa31.94■■■□□ 2.7
RNF4-207ENST00000506706 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.94■■■□□ 2.7
RNF4-207ENST00000506706 KDM5BQ9UGL1 1544 aa31.94■■■□□ 2.7
RNF4-207ENST00000506706 TTC37Q6PGP7 1564 aa31.93■■■□□ 2.7
RNF4-207ENST00000506706 SAMD9LQ8IVG5 1584 aa31.91■■■□□ 2.7
RNF4-207ENST00000506706 C9orf84Q5VXU9 1444 aa31.91■■■□□ 2.7
RNF4-207ENST00000506706 TSPY4P0CV99 314 aa31.88■■■□□ 2.69
RNF4-207ENST00000506706 TSPY10P0CW01 314 aa31.88■■■□□ 2.69
RNF4-207ENST00000506706 MBD5Q9P267 1494 aa31.88■■■□□ 2.69
RNF4-207ENST00000506706 MYO5CQ9NQX4 1742 aa31.87■■■□□ 2.69
RNF4-207ENST00000506706 HNRNPMP52272 730 aaKnown RBP eCLIP31.87■■■□□ 2.696e-9■■■■■ 27.4
RNF4-207ENST00000506706 ARHGAP5Q13017 1502 aa31.85■■■□□ 2.69
RNF4-207ENST00000506706 RSPH4AQ5TD94 716 aa31.85■■■□□ 2.69
RNF4-207ENST00000506706 CCDC141Q6ZP82 1450 aa31.83■■■□□ 2.69
RNF4-207ENST00000506706 ANKRD50Q9ULJ7 1429 aa31.83■■■□□ 2.69
RNF4-207ENST00000506706 MIER1Q8N108 512 aa31.82■■■□□ 2.68
RNF4-207ENST00000506706 KCNH8Q96L42 1107 aa31.82■■■□□ 2.68
RNF4-207ENST00000506706 SLC4A1APQ9BWU0 796 aaKnown RBP31.82■■■□□ 2.68
RNF4-207ENST00000506706 PZPP20742 1482 aa31.78■■■□□ 2.68
RNF4-207ENST00000506706 ANKRD30BQ9BXX2 1392 aa31.78■■■□□ 2.68
RNF4-207ENST00000506706 FOXD1Q16676 465 aa31.77■■■□□ 2.68
RNF4-207ENST00000506706 OSCARQ8IYS5 282 aa31.77■■■□□ 2.68
RNF4-207ENST00000506706 PLEKHH2Q8IVE3 1493 aa31.76■■■□□ 2.68
RNF4-207ENST00000506706 SYCP2Q9BX26 1530 aa31.75■■■□□ 2.67
RNF4-207ENST00000506706 PLCH2O75038 1416 aa31.73■■■□□ 2.67
RNF4-207ENST00000506706 KIF15Q9NS87 1388 aa31.73■■■□□ 2.67
RNF4-207ENST00000506706 KIAA1107Q9UPP5 1409 aa31.73■■■□□ 2.67
RNF4-207ENST00000506706 MAST1Q9Y2H9 1570 aa31.7■■■□□ 2.67
RNF4-207ENST00000506706 RPRD2Q5VT52 1461 aaKnown RBP31.69■■■□□ 2.66
RNF4-207ENST00000506706 EFCAB2Q5VUJ9 269 aa31.65■■■□□ 2.66
RNF4-207ENST00000506706 WDR7Q9Y4E6 1490 aa31.65■■■□□ 2.66
RNF4-207ENST00000506706 KDM5DQ9BY66 1539 aa31.64■■■□□ 2.65
RNF4-207ENST00000506706 NUP155O75694 1391 aa31.62■■■□□ 2.65
RNF4-207ENST00000506706 ARAP3Q8WWN8 1544 aa31.6■■■□□ 2.65
RNF4-207ENST00000506706 L3MBTL2Q969R5 705 aa31.6■■■□□ 2.65
RNF4-207ENST00000506706 PKD2Q13563 968 aa31.59■■■□□ 2.65
RNF4-207ENST00000506706 ARHGEF12Q9NZN5 1544 aa31.58■■■□□ 2.65
RNF4-207ENST00000506706 PLXNC1O60486 1568 aa31.57■■■□□ 2.64
RNF4-207ENST00000506706 ABCC1P33527 1531 aa31.57■■■□□ 2.64
RNF4-207ENST00000506706 TEX14Q8IWB6 1497 aa31.54■■■□□ 2.64
RNF4-207ENST00000506706 CENPBP07199 599 aaPredicted RBP31.53■■■□□ 2.64
RNF4-207ENST00000506706 HIRIP3Q9BW71 556 aaPredicted RBP31.5■■■□□ 2.63
RNF4-207ENST00000506706 ABCA9Q8IUA7 1624 aa31.5■■■□□ 2.63
RNF4-207ENST00000506706 ASXL2Q76L83 1435 aa31.49■■■□□ 2.63
RNF4-207ENST00000506706 DUOX2Q9NRD8 1548 aa31.46■■■□□ 2.63
RNF4-207ENST00000506706 TRAPPC8Q9Y2L5 1435 aa31.45■■■□□ 2.62
RNF4-207ENST00000506706 UNC13BO14795 1591 aa31.45■■■□□ 2.62
RNF4-207ENST00000506706 NPM1P06748 294 aaKnown RBP eCLIP31.44■■■□□ 2.62
RNF4-207ENST00000506706 DDX10Q13206 875 aaKnown RBP31.44■■■□□ 2.62
RNF4-207ENST00000506706 FAM135AQ9P2D6 1515 aa31.44■■■□□ 2.62
RNF4-207ENST00000506706 FANCAO15360 1455 aa31.4■■■□□ 2.62
RNF4-207ENST00000506706 ERBINQ96RT1 1412 aa31.4■■■□□ 2.62
RNF4-207ENST00000506706 YTHDC1Q96MU7 727 aaKnown RBP31.39■■■□□ 2.62
RNF4-207ENST00000506706 RTEL1-TNFRSF6BF6WH68 1400 aa31.37■■■□□ 2.61
RNF4-207ENST00000506706 NBPF8Q3BBV2 869 aa31.36■■■□□ 2.61
RNF4-207ENST00000506706 EIF4G2P78344 907 aaKnown RBP eCLIP31.36■■■□□ 2.61
RNF4-207ENST00000506706 SPAG9O60271 1321 aaKnown RBP31.36■■■□□ 2.61
RNF4-207ENST00000506706 HSPA5P11021 654 aaKnown RBP31.34■■■□□ 2.61
RNF4-207ENST00000506706 IQGAP3Q86VI3 1631 aa31.33■■■□□ 2.61
RNF4-207ENST00000506706 AFAP1Q8N556 730 aa31.31■■■□□ 2.6
RNF4-207ENST00000506706 ZFYVE16Q7Z3T8 1539 aa31.31■■■□□ 2.6
RNF4-207ENST00000506706 MAGI2Q86UL8 1455 aa31.3■■■□□ 2.6
RNF4-207ENST00000506706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.29■■■□□ 2.69e-7■■□□□ 12.4
RNF4-207ENST00000506706 ADGRL1O94910 1474 aa31.28■■■□□ 2.6
RNF4-207ENST00000506706 SCAPERQ9BY12 1400 aa31.25■■■□□ 2.59
RNF4-207ENST00000506706 INO80Q9ULG1 1556 aaPredicted RBP31.23■■■□□ 2.59
RNF4-207ENST00000506706 ATP7AQ04656 1500 aa31.22■■■□□ 2.59
RNF4-207ENST00000506706 UHRF1BP1Q6BDS2 1440 aa31.19■■■□□ 2.58
RNF4-207ENST00000506706 CCDC144AA2RUR9 1427 aa31.18■■■□□ 2.58
RNF4-207ENST00000506706 SCAF1Q9H7N4 1312 aaKnown RBP31.17■■■□□ 2.58
RNF4-207ENST00000506706 CFAP74Q9C0B2 1584 aa31.17■■■□□ 2.58
RNF4-207ENST00000506706 CD109Q6YHK3 1445 aa31.16■■■□□ 2.58
RNF4-207ENST00000506706 WASHC2AQ641Q2 1341 aa31.15■■■□□ 2.58
RNF4-207ENST00000506706 SPATA31E1Q6ZUB1 1445 aa31.15■■■□□ 2.58
RNF4-207ENST00000506706 PLA2R1Q13018 1463 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms