RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 ABCC10Q5T3U5 1492 aa17.78■□□□□ 0.44
LIN54-206ENST00000506560 DNMT1P26358 1616 aaKnown RBP17.78■□□□□ 0.44
LIN54-206ENST00000506560 GCC2Q8IWJ2 1684 aa17.77■□□□□ 0.43
LIN54-206ENST00000506560 CDC42BPAQ5VT25 1732 aa17.76■□□□□ 0.43
LIN54-206ENST00000506560 TRIM52Q96A61 297 aa17.75■□□□□ 0.43
LIN54-206ENST00000506560 DENND4BO75064 1496 aaPredicted RBP17.75■□□□□ 0.43
LIN54-206ENST00000506560 ITSN2Q9NZM3 1697 aa17.74■□□□□ 0.43
LIN54-206ENST00000506560 FOXD1Q16676 465 aa17.73■□□□□ 0.43
LIN54-206ENST00000506560 AKNAQ7Z591 1439 aa17.72■□□□□ 0.43
LIN54-206ENST00000506560 ABCC2Q92887 1545 aa17.71■□□□□ 0.43
LIN54-206ENST00000506560 KCNH8Q96L42 1107 aa17.69■□□□□ 0.42
LIN54-206ENST00000506560 ROCK1Q13464 1354 aa17.68■□□□□ 0.42
LIN54-206ENST00000506560 HNRNPMP52272 730 aaKnown RBP eCLIP17.68■□□□□ 0.42
LIN54-206ENST00000506560 TTC37Q6PGP7 1564 aa17.66■□□□□ 0.42
LIN54-206ENST00000506560 MPHOSPH9Q99550 1183 aa17.66■□□□□ 0.42
LIN54-206ENST00000506560 NCOA1Q15788 1441 aa17.66■□□□□ 0.42
LIN54-206ENST00000506560 CDC42BPBQ9Y5S2 1711 aa17.65■□□□□ 0.42
LIN54-206ENST00000506560 MIER1Q8N108 512 aa17.64■□□□□ 0.41
LIN54-206ENST00000506560 CROCC2H7BZ55 1655 aa17.63■□□□□ 0.41
LIN54-206ENST00000506560 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.63■□□□□ 0.41
LIN54-206ENST00000506560 PPP1R15AO75807 674 aaPredicted RBP17.62■□□□□ 0.41
LIN54-206ENST00000506560 ZCCHC11Q5TAX3 1644 aaKnown RBP17.62■□□□□ 0.41
LIN54-206ENST00000506560 HIRIP3Q9BW71 556 aaPredicted RBP17.62■□□□□ 0.41
LIN54-206ENST00000506560 SAMD9LQ8IVG5 1584 aa17.62■□□□□ 0.41
LIN54-206ENST00000506560 TONSLQ96HA7 1378 aa17.61■□□□□ 0.41
LIN54-206ENST00000506560 PREX2Q70Z35 1606 aa17.6■□□□□ 0.41
LIN54-206ENST00000506560 MBD5Q9P267 1494 aa17.59■□□□□ 0.41
LIN54-206ENST00000506560 ADGBQ8N7X0 1667 aa17.59■□□□□ 0.41
LIN54-206ENST00000506560 C9orf84Q5VXU9 1444 aa17.59■□□□□ 0.41
LIN54-206ENST00000506560 ADGRL2O95490 1459 aa17.58■□□□□ 0.41
LIN54-206ENST00000506560 KDM5BQ9UGL1 1544 aa17.58■□□□□ 0.4
LIN54-206ENST00000506560 SLC4A1APQ9BWU0 796 aaKnown RBP17.57■□□□□ 0.4
LIN54-206ENST00000506560 ANKRD30AQ9BXX3 1397 aa17.57■□□□□ 0.4
LIN54-206ENST00000506560 ARHGAP5Q13017 1502 aa17.56■□□□□ 0.4
LIN54-206ENST00000506560 UHRF1BP1LA0JNW5 1464 aa17.56■□□□□ 0.4
LIN54-206ENST00000506560 OSCARQ8IYS5 282 aa17.55■□□□□ 0.4
LIN54-206ENST00000506560 TIMELESSQ9UNS1 1208 aa17.55■□□□□ 0.4
LIN54-206ENST00000506560 SYCP2Q9BX26 1530 aa17.55■□□□□ 0.4
LIN54-206ENST00000506560 PZPP20742 1482 aa17.55■□□□□ 0.4
LIN54-206ENST00000506560 TSPY4P0CV99 314 aa17.54■□□□□ 0.4
LIN54-206ENST00000506560 TSPY10P0CW01 314 aa17.54■□□□□ 0.4
LIN54-206ENST00000506560 ANKRD50Q9ULJ7 1429 aa17.54■□□□□ 0.4
LIN54-206ENST00000506560 ANKRD30BQ9BXX2 1392 aa17.52■□□□□ 0.4
LIN54-206ENST00000506560 SHANK2Q9UPX8 1470 aa17.51■□□□□ 0.39
LIN54-206ENST00000506560 MYO5CQ9NQX4 1742 aa17.51■□□□□ 0.39
LIN54-206ENST00000506560 ARHGEF12Q9NZN5 1544 aa17.51■□□□□ 0.39
LIN54-206ENST00000506560 KIF15Q9NS87 1388 aa17.51■□□□□ 0.39
LIN54-206ENST00000506560 ARHGEF5Q12774 1597 aa17.5■□□□□ 0.39
LIN54-206ENST00000506560 CCDC141Q6ZP82 1450 aa17.5■□□□□ 0.39
LIN54-206ENST00000506560 L3MBTL2Q969R5 705 aa17.48■□□□□ 0.39
LIN54-206ENST00000506560 PKD2Q13563 968 aa17.47■□□□□ 0.39
LIN54-206ENST00000506560 YTHDC1Q96MU7 727 aaKnown RBP17.47■□□□□ 0.39
LIN54-206ENST00000506560 PLCH2O75038 1416 aa17.47■□□□□ 0.39
LIN54-206ENST00000506560 NUP155O75694 1391 aa17.46■□□□□ 0.38
LIN54-206ENST00000506560 WDR7Q9Y4E6 1490 aa17.43■□□□□ 0.38
LIN54-206ENST00000506560 TRAPPC8Q9Y2L5 1435 aa17.43■□□□□ 0.38
LIN54-206ENST00000506560 RPRD2Q5VT52 1461 aaKnown RBP17.42■□□□□ 0.38
LIN54-206ENST00000506560 DDX10Q13206 875 aaKnown RBP17.42■□□□□ 0.38
LIN54-206ENST00000506560 EFCAB2Q5VUJ9 269 aa17.41■□□□□ 0.38
LIN54-206ENST00000506560 KIAA1107Q9UPP5 1409 aa17.41■□□□□ 0.38
LIN54-206ENST00000506560 NBPF8Q3BBV2 869 aa17.4■□□□□ 0.38
LIN54-206ENST00000506560 ASXL2Q76L83 1435 aa17.4■□□□□ 0.38
LIN54-206ENST00000506560 AFAP1Q8N556 730 aa17.4■□□□□ 0.38
LIN54-206ENST00000506560 TEX14Q8IWB6 1497 aa17.4■□□□□ 0.38
LIN54-206ENST00000506560 RSPH4AQ5TD94 716 aa17.39■□□□□ 0.37
LIN54-206ENST00000506560 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
LIN54-206ENST00000506560 ABCC1P33527 1531 aa17.38■□□□□ 0.37
LIN54-206ENST00000506560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.37
LIN54-206ENST00000506560 PLEKHH2Q8IVE3 1493 aa17.37■□□□□ 0.37
LIN54-206ENST00000506560 MAST1Q9Y2H9 1570 aa17.35■□□□□ 0.37
LIN54-206ENST00000506560 ACIN1Q9UKV3 1341 aaKnown RBP17.34■□□□□ 0.37
LIN54-206ENST00000506560 KDM5DQ9BY66 1539 aa17.33■□□□□ 0.36
LIN54-206ENST00000506560 HSPA5P11021 654 aaKnown RBP17.33■□□□□ 0.36
LIN54-206ENST00000506560 FAM135AQ9P2D6 1515 aa17.32■□□□□ 0.36
LIN54-206ENST00000506560 FANCAO15360 1455 aa17.32■□□□□ 0.36
LIN54-206ENST00000506560 ABCA9Q8IUA7 1624 aa17.32■□□□□ 0.36
LIN54-206ENST00000506560 ZNF326Q5BKZ1 582 aaKnown RBP17.31■□□□□ 0.36
LIN54-206ENST00000506560 PLXNC1O60486 1568 aa17.31■□□□□ 0.36
LIN54-206ENST00000506560 NPM1P06748 294 aaKnown RBP eCLIP17.29■□□□□ 0.36
LIN54-206ENST00000506560 SPAG9O60271 1321 aaKnown RBP17.29■□□□□ 0.36
LIN54-206ENST00000506560 ARAP3Q8WWN8 1544 aa17.27■□□□□ 0.35
LIN54-206ENST00000506560 SCAPERQ9BY12 1400 aa17.26■□□□□ 0.35
LIN54-206ENST00000506560 DUOX2Q9NRD8 1548 aa17.26■□□□□ 0.35
LIN54-206ENST00000506560 UNC13BO14795 1591 aa17.26■□□□□ 0.35
LIN54-206ENST00000506560 CYB5RLQ6IPT4 315 aa17.26■□□□□ 0.35
LIN54-206ENST00000506560 ADGRL1O94910 1474 aa17.26■□□□□ 0.35
LIN54-206ENST00000506560 ZFYVE16Q7Z3T8 1539 aa17.26■□□□□ 0.35
LIN54-206ENST00000506560 C11orf95C9JLR9 678 aaPredicted RBP17.25■□□□□ 0.35
LIN54-206ENST00000506560 EIF4G2P78344 907 aaKnown RBP eCLIP17.24■□□□□ 0.35
LIN54-206ENST00000506560 MYT1LQ9UL68 1186 aa17.24■□□□□ 0.35
LIN54-206ENST00000506560 KDM2AQ9Y2K7 1162 aa17.24■□□□□ 0.35
LIN54-206ENST00000506560 WASHC2AQ641Q2 1341 aa17.24■□□□□ 0.35
LIN54-206ENST00000506560 PLA2R1Q13018 1463 aa17.24■□□□□ 0.35
LIN54-206ENST00000506560 CENPBP07199 599 aaPredicted RBP17.22■□□□□ 0.35
LIN54-206ENST00000506560 ERBINQ96RT1 1412 aa17.22■□□□□ 0.35
LIN54-206ENST00000506560 IQGAP3Q86VI3 1631 aa17.2■□□□□ 0.34
LIN54-206ENST00000506560 ATP7AQ04656 1500 aa17.2■□□□□ 0.34
LIN54-206ENST00000506560 RGL3Q3MIN7 710 aa17.2■□□□□ 0.34
LIN54-206ENST00000506560 CD109Q6YHK3 1445 aa17.2■□□□□ 0.34
LIN54-206ENST00000506560 DCAF11Q8TEB1 546 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms