RNA–Protein interactions for RNA: ENST00000505732.5

TTC39B-204, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,881 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-204ENST00000505732 ITSN2Q9NZM3 1697 aa30.26■■■□□ 2.43
TTC39B-204ENST00000505732 CAMSAP2Q08AD1 1489 aa30.25■■■□□ 2.43
TTC39B-204ENST00000505732 ZNF777Q9ULD5 760 aaPredicted RBP30.23■■■□□ 2.43
TTC39B-204ENST00000505732 KDM6BO15054 1643 aa30.23■■■□□ 2.43
TTC39B-204ENST00000505732 TRIM52Q96A61 297 aa30.23■■■□□ 2.43
TTC39B-204ENST00000505732 ABCC10Q5T3U5 1492 aa30.21■■■□□ 2.43
TTC39B-204ENST00000505732 ERCC6L2Q5T890 1561 aa30.2■■■□□ 2.42
TTC39B-204ENST00000505732 PPP1R15AO75807 674 aaPredicted RBP30.16■■■□□ 2.42
TTC39B-204ENST00000505732 MIER1Q8N108 512 aa30.15■■■□□ 2.42
TTC39B-204ENST00000505732 CLASP1Q7Z460 1538 aa30.15■■■□□ 2.42
TTC39B-204ENST00000505732 DENND4BO75064 1496 aaPredicted RBP30.12■■■□□ 2.41
TTC39B-204ENST00000505732 MPHOSPH9Q99550 1183 aa30.12■■■□□ 2.41
TTC39B-204ENST00000505732 TONSLQ96HA7 1378 aa30.12■■■□□ 2.41
TTC39B-204ENST00000505732 ACIN1Q9UKV3 1341 aaKnown RBP30.12■■■□□ 2.41
TTC39B-204ENST00000505732 CDC42BPAQ5VT25 1732 aa30.11■■■□□ 2.41
TTC39B-204ENST00000505732 NCOA1Q15788 1441 aa30.08■■■□□ 2.41
TTC39B-204ENST00000505732 ABCC2Q92887 1545 aa30.06■■■□□ 2.4
TTC39B-204ENST00000505732 ADGRL2O95490 1459 aa30.03■■■□□ 2.4
TTC39B-204ENST00000505732 CROCC2H7BZ55 1655 aa30.01■■■□□ 2.39
TTC39B-204ENST00000505732 ANKRD30AQ9BXX3 1397 aa30■■■□□ 2.39
TTC39B-204ENST00000505732 ADGBQ8N7X0 1667 aa29.99■■■□□ 2.39
TTC39B-204ENST00000505732 FOXD1Q16676 465 aa29.97■■■□□ 2.39
TTC39B-204ENST00000505732 HNRNPMP52272 730 aaKnown RBP eCLIP29.95■■■□□ 2.389e-7■■■■□ 25.4
TTC39B-204ENST00000505732 SHANK2Q9UPX8 1470 aa29.94■■■□□ 2.38
TTC39B-204ENST00000505732 TSPY4P0CV99 314 aa29.93■■■□□ 2.38
TTC39B-204ENST00000505732 TSPY10P0CW01 314 aa29.93■■■□□ 2.38
TTC39B-204ENST00000505732 SLC4A1APQ9BWU0 796 aaKnown RBP29.93■■■□□ 2.38
TTC39B-204ENST00000505732 C9orf84Q5VXU9 1444 aa29.93■■■□□ 2.38
TTC39B-204ENST00000505732 UHRF1BP1LA0JNW5 1464 aa29.92■■■□□ 2.38
TTC39B-204ENST00000505732 PREX2Q70Z35 1606 aa29.9■■■□□ 2.38
TTC39B-204ENST00000505732 MBD5Q9P267 1494 aa29.9■■■□□ 2.38
TTC39B-204ENST00000505732 KDM5BQ9UGL1 1544 aa29.9■■■□□ 2.38
TTC39B-204ENST00000505732 CDC42BPBQ9Y5S2 1711 aa29.9■■■□□ 2.38
TTC39B-204ENST00000505732 ANKRD30BQ9BXX2 1392 aa29.89■■■□□ 2.38
TTC39B-204ENST00000505732 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.89■■■□□ 2.38
TTC39B-204ENST00000505732 ANKRD50Q9ULJ7 1429 aa29.88■■■□□ 2.37
TTC39B-204ENST00000505732 ARHGEF5Q12774 1597 aa29.87■■■□□ 2.37
TTC39B-204ENST00000505732 KCNH8Q96L42 1107 aa29.87■■■□□ 2.37
TTC39B-204ENST00000505732 TTC37Q6PGP7 1564 aa29.87■■■□□ 2.37
TTC39B-204ENST00000505732 SAMD9LQ8IVG5 1584 aa29.87■■■□□ 2.37
TTC39B-204ENST00000505732 PZPP20742 1482 aa29.86■■■□□ 2.37
TTC39B-204ENST00000505732 CENPBP07199 599 aaPredicted RBP29.85■■■□□ 2.37
TTC39B-204ENST00000505732 RSPH4AQ5TD94 716 aa29.85■■■□□ 2.37
TTC39B-204ENST00000505732 ZCCHC11Q5TAX3 1644 aaKnown RBP29.83■■■□□ 2.37
TTC39B-204ENST00000505732 ARHGAP5Q13017 1502 aa29.81■■■□□ 2.36
TTC39B-204ENST00000505732 HIRIP3Q9BW71 556 aaPredicted RBP29.81■■■□□ 2.36
TTC39B-204ENST00000505732 CCDC141Q6ZP82 1450 aa29.81■■■□□ 2.36
TTC39B-204ENST00000505732 YTHDC1Q96MU7 727 aaKnown RBP29.78■■■□□ 2.36
TTC39B-204ENST00000505732 L3MBTL2Q969R5 705 aa29.78■■■□□ 2.36
TTC39B-204ENST00000505732 KIF15Q9NS87 1388 aa29.77■■■□□ 2.36
TTC39B-204ENST00000505732 RPRD2Q5VT52 1461 aaKnown RBP29.77■■■□□ 2.36
TTC39B-204ENST00000505732 SYCP2Q9BX26 1530 aa29.74■■■□□ 2.35
TTC39B-204ENST00000505732 MYO5CQ9NQX4 1742 aa29.73■■■□□ 2.35
TTC39B-204ENST00000505732 DDX10Q13206 875 aaKnown RBP29.72■■■□□ 2.35
TTC39B-204ENST00000505732 PKD2Q13563 968 aa29.72■■■□□ 2.35
TTC39B-204ENST00000505732 KIAA1107Q9UPP5 1409 aa29.72■■■□□ 2.35
TTC39B-204ENST00000505732 PLCH2O75038 1416 aa29.72■■■□□ 2.35
TTC39B-204ENST00000505732 NUP155O75694 1391 aa29.71■■■□□ 2.35
TTC39B-204ENST00000505732 PLEKHH2Q8IVE3 1493 aa29.69■■■□□ 2.34
TTC39B-204ENST00000505732 OSCARQ8IYS5 282 aa29.68■■■□□ 2.34
TTC39B-204ENST00000505732 SCAF1Q9H7N4 1312 aaKnown RBP29.68■■■□□ 2.34
TTC39B-204ENST00000505732 EFCAB2Q5VUJ9 269 aa29.66■■■□□ 2.34
TTC39B-204ENST00000505732 TEX14Q8IWB6 1497 aa29.64■■■□□ 2.34
TTC39B-204ENST00000505732 MAST1Q9Y2H9 1570 aa29.63■■■□□ 2.33
TTC39B-204ENST00000505732 KDM5DQ9BY66 1539 aa29.63■■■□□ 2.33
TTC39B-204ENST00000505732 ARHGEF12Q9NZN5 1544 aa29.62■■■□□ 2.33
TTC39B-204ENST00000505732 NBPF8Q3BBV2 869 aa29.58■■■□□ 2.33
TTC39B-204ENST00000505732 WDR7Q9Y4E6 1490 aa29.58■■■□□ 2.33
TTC39B-204ENST00000505732 HSPA5P11021 654 aaKnown RBP29.57■■■□□ 2.32
TTC39B-204ENST00000505732 EIF4G2P78344 907 aaKnown RBP eCLIP29.54■■■□□ 2.32
TTC39B-204ENST00000505732 ABCC1P33527 1531 aa29.51■■■□□ 2.31
TTC39B-204ENST00000505732 PLXNC1O60486 1568 aa29.51■■■□□ 2.31
TTC39B-204ENST00000505732 ARAP3Q8WWN8 1544 aa29.5■■■□□ 2.31
TTC39B-204ENST00000505732 TRAPPC8Q9Y2L5 1435 aa29.5■■■□□ 2.31
TTC39B-204ENST00000505732 FAM135AQ9P2D6 1515 aa29.48■■■□□ 2.31
TTC39B-204ENST00000505732 ASXL2Q76L83 1435 aa29.45■■■□□ 2.31
TTC39B-204ENST00000505732 DUOX2Q9NRD8 1548 aa29.44■■■□□ 2.3
TTC39B-204ENST00000505732 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.43■■■□□ 2.39e-8■□□□□ 10.2
TTC39B-204ENST00000505732 AFAP1Q8N556 730 aa29.42■■■□□ 2.3
TTC39B-204ENST00000505732 UNC13BO14795 1591 aa29.41■■■□□ 2.3
TTC39B-204ENST00000505732 WASHC2AQ641Q2 1341 aa29.41■■■□□ 2.3
TTC39B-204ENST00000505732 ABCA9Q8IUA7 1624 aa29.4■■■□□ 2.3
TTC39B-204ENST00000505732 SPAG9O60271 1321 aaKnown RBP29.4■■■□□ 2.3
TTC39B-204ENST00000505732 ERBINQ96RT1 1412 aa29.4■■■□□ 2.3
TTC39B-204ENST00000505732 NPM1P06748 294 aaKnown RBP eCLIP29.4■■■□□ 2.3
TTC39B-204ENST00000505732 GTF3C3Q9Y5Q9 886 aa29.39■■■□□ 2.3
TTC39B-204ENST00000505732 FANCAO15360 1455 aa29.38■■■□□ 2.29
TTC39B-204ENST00000505732 ANP32CO43423 234 aa29.38■■■□□ 2.29
TTC39B-204ENST00000505732 RTEL1-TNFRSF6BF6WH68 1400 aa29.36■■■□□ 2.29
TTC39B-204ENST00000505732 ZNF326Q5BKZ1 582 aaKnown RBP29.34■■■□□ 2.29
TTC39B-204ENST00000505732 SPATA31E1Q6ZUB1 1445 aa29.34■■■□□ 2.29
TTC39B-204ENST00000505732 IQGAP3Q86VI3 1631 aa29.31■■■□□ 2.28
TTC39B-204ENST00000505732 MAGI2Q86UL8 1455 aa29.3■■■□□ 2.28
TTC39B-204ENST00000505732 C11orf95C9JLR9 678 aaPredicted RBP29.3■■■□□ 2.28
TTC39B-204ENST00000505732 UHRF1BP1Q6BDS2 1440 aa29.3■■■□□ 2.28
TTC39B-204ENST00000505732 ZFYVE16Q7Z3T8 1539 aa29.28■■■□□ 2.28
TTC39B-204ENST00000505732 CCER2I3L3R5 266 aa29.28■■■□□ 2.28
TTC39B-204ENST00000505732 SCAPERQ9BY12 1400 aa29.28■■■□□ 2.28
TTC39B-204ENST00000505732 ADGRL1O94910 1474 aa29.27■■■□□ 2.28
TTC39B-204ENST00000505732 PLA2R1Q13018 1463 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms