RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 DDX27Q96GQ7 796 aaKnown RBP5.89□□□□□ -1.47
HMGB1P22-201ENST00000505315 TSPYL2Q9H2G4 693 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P22-201ENST00000505315 LOC105371045A0A1W2PR82 267 aa5.88□□□□□ -1.47
HMGB1P22-201ENST00000505315 PCMTD1Q96MG8 357 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P22-201ENST00000505315 TRAIPQ9BWF2 469 aa5.88□□□□□ -1.47
HMGB1P22-201ENST00000505315 GZF1Q9H116 711 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P22-201ENST00000505315 MTMR7Q9Y216 660 aa5.88□□□□□ -1.47
HMGB1P22-201ENST00000505315 SHROOM4Q9ULL8 1493 aa5.88□□□□□ -1.47
HMGB1P22-201ENST00000505315 PLEKHG3A1L390 1219 aa5.87□□□□□ -1.47
HMGB1P22-201ENST00000505315 MNX1P50219 401 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P22-201ENST00000505315 NCKAP5LQ9HCH0 1330 aa5.87□□□□□ -1.47
HMGB1P22-201ENST00000505315 FOXD4L5Q5VV16 416 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P22-201ENST00000505315 EFCAB3Q8N7B9 438 aa5.86□□□□□ -1.47
HMGB1P22-201ENST00000505315 FOXD4L4Q8WXT5 416 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P22-201ENST00000505315 SERPINA10Q9UK55 444 aa5.86□□□□□ -1.47
HMGB1P22-201ENST00000505315 PHF8Q9UPP1 1060 aa5.86□□□□□ -1.47
HMGB1P22-201ENST00000505315 TTLL12Q14166 644 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P22-201ENST00000505315 CABP2Q9NPB3 220 aa5.85□□□□□ -1.47
HMGB1P22-201ENST00000505315 MFAP1P55081 439 aaKnown RBP5.84□□□□□ -1.47
HMGB1P22-201ENST00000505315 PROSER2Q86WR7 435 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P22-201ENST00000505315 FBXW7Q969H0 707 aa5.84□□□□□ -1.47
HMGB1P22-201ENST00000505315 MYT1LQ9UL68 1186 aa5.84□□□□□ -1.47
HMGB1P22-201ENST00000505315 NUTM2FA1L443 756 aa5.83□□□□□ -1.48
HMGB1P22-201ENST00000505315 SOX12O15370 315 aa5.83□□□□□ -1.48
HMGB1P22-201ENST00000505315 PELP1Q8IZL8 1130 aaKnown RBP5.83□□□□□ -1.48
HMGB1P22-201ENST00000505315 ARIH1Q9Y4X5 557 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P22-201ENST00000505315 MINK1Q8N4C8 1332 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P22-201ENST00000505315 IGSF3O75054 1194 aa5.82□□□□□ -1.48
HMGB1P22-201ENST00000505315 MFSD10Q14728 455 aa5.82□□□□□ -1.48
HMGB1P22-201ENST00000505315 RGS22Q8NE09 1264 aa5.82□□□□□ -1.48
HMGB1P22-201ENST00000505315 FBXO22Q8NEZ5 403 aa5.82□□□□□ -1.48
HMGB1P22-201ENST00000505315 CCDC102AQ96A19 550 aa5.82□□□□□ -1.48
HMGB1P22-201ENST00000505315 PARP9Q8IXQ6 854 aa5.81□□□□□ -1.48
HMGB1P22-201ENST00000505315 RETREG2Q8NC44 543 aa5.81□□□□□ -1.48
HMGB1P22-201ENST00000505315 E9PSI1 815 aa5.8□□□□□ -1.48
HMGB1P22-201ENST00000505315 ONECUT3O60422 494 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P22-201ENST00000505315 HMGB1P09429 215 aaKnown RBP5.8□□□□□ -1.48
HMGB1P22-201ENST00000505315 ZNF428Q96B54 188 aa5.8□□□□□ -1.48
HMGB1P22-201ENST00000505315 DPYSL4O14531 572 aa5.79□□□□□ -1.48
HMGB1P22-201ENST00000505315 MAP2K5Q13163 448 aa5.79□□□□□ -1.48
HMGB1P22-201ENST00000505315 CAMK2BQ13554 666 aa5.79□□□□□ -1.48
HMGB1P22-201ENST00000505315 MCM6Q14566 821 aa5.79□□□□□ -1.48
HMGB1P22-201ENST00000505315 CRISPLD2Q9H0B8 497 aa5.79□□□□□ -1.48
HMGB1P22-201ENST00000505315 ACIN1Q9UKV3 1341 aaKnown RBP5.78□□□□□ -1.48
HMGB1P22-201ENST00000505315 GRXCR2A6NFK2 248 aa5.78□□□□□ -1.48
HMGB1P22-201ENST00000505315 IRF6O14896 467 aa5.78□□□□□ -1.48
HMGB1P22-201ENST00000505315 ZNF579Q8NAF0 562 aaKnown RBP5.78□□□□□ -1.48
HMGB1P22-201ENST00000505315 GOPCQ9HD26 462 aa5.78□□□□□ -1.48
HMGB1P22-201ENST00000505315 AMHR2Q16671 573 aa5.77□□□□□ -1.49
HMGB1P22-201ENST00000505315 POM121Q96HA1 1249 aa5.77□□□□□ -1.49
HMGB1P22-201ENST00000505315 SPDYE16A6NNV3 312 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P22-201ENST00000505315 CDK11BP21127 795 aaKnown RBP5.76□□□□□ -1.49
HMGB1P22-201ENST00000505315 GOLGA2Q08379 1002 aa5.76□□□□□ -1.49
HMGB1P22-201ENST00000505315 PPP1R15BQ5SWA1 713 aa5.76□□□□□ -1.49
HMGB1P22-201ENST00000505315 CDK11AQ9UQ88 783 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P22-201ENST00000505315 PDE4CQ08493 712 aa5.75□□□□□ -1.49
HMGB1P22-201ENST00000505315 IRF5Q13568 498 aa5.75□□□□□ -1.49
HMGB1P22-201ENST00000505315 USP35Q9P2H5 1018 aa5.75□□□□□ -1.49
HMGB1P22-201ENST00000505315 ZNF330Q9Y3S2 320 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P22-201ENST00000505315 GNPATO15228 680 aa5.74□□□□□ -1.49
HMGB1P22-201ENST00000505315 GIGYF2Q6Y7W6 1299 aaKnown RBP5.74□□□□□ -1.49
HMGB1P22-201ENST00000505315 GPR37O15354 613 aa5.73□□□□□ -1.49
HMGB1P22-201ENST00000505315 HSP90B1P14625 803 aaKnown RBP5.73□□□□□ -1.49
HMGB1P22-201ENST00000505315 MYT1Q01538 1121 aa5.73□□□□□ -1.49
HMGB1P22-201ENST00000505315 PATL2C9JE40 543 aaKnown RBP5.72□□□□□ -1.49
HMGB1P22-201ENST00000505315 PDIA6Q15084 440 aa5.72□□□□□ -1.49
HMGB1P22-201ENST00000505315 WWC1Q8IX03 1113 aa5.72□□□□□ -1.49
HMGB1P22-201ENST00000505315 FCHSD2O94868 740 aa5.71□□□□□ -1.5
HMGB1P22-201ENST00000505315 MS4A1P11836 297 aa5.71□□□□□ -1.5
HMGB1P22-201ENST00000505315 SH3D19Q5HYK7 790 aa5.71□□□□□ -1.5
HMGB1P22-201ENST00000505315 IFNL1Q8IU54 200 aa5.71□□□□□ -1.5
HMGB1P22-201ENST00000505315 FNBP4Q8N3X1 1017 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P22-201ENST00000505315 AKT1S1Q96B36 256 aa5.71□□□□□ -1.5
HMGB1P22-201ENST00000505315 PLSCR2Q9NRY7 297 aa5.71□□□□□ -1.5
HMGB1P22-201ENST00000505315 PPP1R15AO75807 674 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P22-201ENST00000505315 FECHP22830 423 aa5.7□□□□□ -1.5
HMGB1P22-201ENST00000505315 HIC1Q14526 733 aa5.7□□□□□ -1.5
HMGB1P22-201ENST00000505315 CALR3Q96L12 384 aaKnown RBP5.7□□□□□ -1.5
HMGB1P22-201ENST00000505315 POLR3EQ9NVU0 708 aa5.7□□□□□ -1.5
HMGB1P22-201ENST00000505315 SKIV2LQ15477 1246 aaKnown RBP5.69□□□□□ -1.5
HMGB1P22-201ENST00000505315 PROCA1Q8NCQ7 364 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P22-201ENST00000505315 MS4A4AQ96JQ5 239 aa5.69□□□□□ -1.5
HMGB1P22-201ENST00000505315 EMILIN3Q9NT22 766 aa5.69□□□□□ -1.5
HMGB1P22-201ENST00000505315 COG6Q9Y2V7 657 aa5.69□□□□□ -1.5
HMGB1P22-201ENST00000505315 PAK3O75914 559 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P22-201ENST00000505315 REM2Q8IYK8 340 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P22-201ENST00000505315 GPHNQ9NQX3 736 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P22-201ENST00000505315 SPDYE5A6NIY4 337 aa5.67□□□□□ -1.5
HMGB1P22-201ENST00000505315 MAP3K9P80192 1104 aa5.67□□□□□ -1.5
HMGB1P22-201ENST00000505315 CHADLQ6NUI6 762 aa5.67□□□□□ -1.5
HMGB1P22-201ENST00000505315 RBM42Q9BTD8 480 aaKnown RBP5.67□□□□□ -1.5
HMGB1P22-201ENST00000505315 CCDC61Q9Y6R9 512 aa5.67□□□□□ -1.5
HMGB1P22-201ENST00000505315 CSB-PGBD3P0DP91 1061 aa5.66□□□□□ -1.5
HMGB1P22-201ENST00000505315 CLCN1P35523 988 aa5.66□□□□□ -1.5
HMGB1P22-201ENST00000505315 CCDC27Q2M243 656 aa5.66□□□□□ -1.5
HMGB1P22-201ENST00000505315 MAP3K13O43283 966 aa5.65□□□□□ -1.5
HMGB1P22-201ENST00000505315 RFX1P22670 979 aa5.65□□□□□ -1.5
HMGB1P22-201ENST00000505315 ABL2P42684 1182 aa5.65□□□□□ -1.5
HMGB1P22-201ENST00000505315 MDM2Q00987 491 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P22-201ENST00000505315 KCNA1Q09470 495 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms