RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 VGFO15240 615 aaPredicted RBP8.23□□□□□ -1.09
HMGB1P35-201ENST00000503360 MS4A4AQ96JQ5 239 aa8.21□□□□□ -1.1
HMGB1P35-201ENST00000503360 TAOK2Q9UL54 1235 aa8.19□□□□□ -1.1
HMGB1P35-201ENST00000503360 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P35-201ENST00000503360 RNF25Q96BH1 459 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P35-201ENST00000503360 ZFP91Q96JP5 570 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P35-201ENST00000503360 NLRP6P59044 892 aa8.16□□□□□ -1.1
HMGB1P35-201ENST00000503360 ZNF316A6NFI3 1004 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P35-201ENST00000503360 PHF8Q9UPP1 1060 aa8.15□□□□□ -1.1
HMGB1P35-201ENST00000503360 PBX2P40425 430 aa8.14□□□□□ -1.11
HMGB1P35-201ENST00000503360 ARSIQ5FYB1 569 aa8.13□□□□□ -1.11
HMGB1P35-201ENST00000503360 FBXO22Q8NEZ5 403 aa8.13□□□□□ -1.11
HMGB1P35-201ENST00000503360 SLC34A2O95436 690 aa8.12□□□□□ -1.11
HMGB1P35-201ENST00000503360 LSM11P83369 360 aaKnown RBP eCLIP8.12□□□□□ -1.11
HMGB1P35-201ENST00000503360 KIF3CO14782 793 aa8.11□□□□□ -1.11
HMGB1P35-201ENST00000503360 ANKRD13DQ6ZTN6 518 aa8.06□□□□□ -1.12
HMGB1P35-201ENST00000503360 PSDA5PKW4 1024 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P35-201ENST00000503360 BCL11BQ9C0K0 894 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P35-201ENST00000503360 MFRPQ9BY79 579 aa8.04□□□□□ -1.12
HMGB1P35-201ENST00000503360 C2orf72A6NCS6 295 aa8.03□□□□□ -1.12
HMGB1P35-201ENST00000503360 KHSRPQ92945 711 aaKnown RBP eCLIP8.02□□□□□ -1.13
HMGB1P35-201ENST00000503360 HCSTQ9UBK5 93 aa8.01□□□□□ -1.13
HMGB1P35-201ENST00000503360 PCDHGA4Q9Y5G9 962 aa8.01□□□□□ -1.13
HMGB1P35-201ENST00000503360 STK24Q9Y6E0 443 aa8□□□□□ -1.13
HMGB1P35-201ENST00000503360 TK2O00142 265 aa7.99□□□□□ -1.13
HMGB1P35-201ENST00000503360 NUDT7P0C024 238 aa7.99□□□□□ -1.13
HMGB1P35-201ENST00000503360 LHX6Q9UPM6 363 aa7.99□□□□□ -1.13
HMGB1P35-201ENST00000503360 POTEEQ6S8J3 1075 aa7.98□□□□□ -1.13
HMGB1P35-201ENST00000503360 TMC2Q8TDI7 906 aa7.98□□□□□ -1.13
HMGB1P35-201ENST00000503360 KDM4FA0A1W2PPD8 638 aa7.97□□□□□ -1.13
HMGB1P35-201ENST00000503360 ARHGAP33O14559 1287 aa7.97□□□□□ -1.13
HMGB1P35-201ENST00000503360 STK25O00506 426 aa7.96□□□□□ -1.14
HMGB1P35-201ENST00000503360 ADGRD1Q6QNK2 874 aa7.95□□□□□ -1.14
HMGB1P35-201ENST00000503360 PTCD2Q8WV60 388 aaKnown RBP7.95□□□□□ -1.14
HMGB1P35-201ENST00000503360 PLA2G2EQ9NZK7 142 aa7.94□□□□□ -1.14
HMGB1P35-201ENST00000503360 HRO43593 1189 aa7.92□□□□□ -1.14
HMGB1P35-201ENST00000503360 AXIN2Q9Y2T1 843 aa7.91□□□□□ -1.14
HMGB1P35-201ENST00000503360 FOXK1P85037 733 aa7.9□□□□□ -1.14
HMGB1P35-201ENST00000503360 RGS20O76081 388 aa7.88□□□□□ -1.15
HMGB1P35-201ENST00000503360 ECM2O94769 699 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P35-201ENST00000503360 TBC1D12O60347 775 aa7.86□□□□□ -1.15
HMGB1P35-201ENST00000503360 PPP4R3BQ5MIZ7 849 aa7.86□□□□□ -1.15
HMGB1P35-201ENST00000503360 IFFO2Q5TF58 517 aa7.86□□□□□ -1.15
HMGB1P35-201ENST00000503360 GPHNQ9NQX3 736 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P35-201ENST00000503360 SLC4A5Q9BY07 1137 aa7.84□□□□□ -1.15
HMGB1P35-201ENST00000503360 PKD2Q13563 968 aa7.83□□□□□ -1.16
HMGB1P35-201ENST00000503360 KCNH8Q96L42 1107 aa7.83□□□□□ -1.16
HMGB1P35-201ENST00000503360 RGL2O15211 777 aa7.82□□□□□ -1.16
HMGB1P35-201ENST00000503360 PPP1R37O75864 691 aa7.82□□□□□ -1.16
HMGB1P35-201ENST00000503360 DMRTA1Q5VZB9 504 aa7.82□□□□□ -1.16
HMGB1P35-201ENST00000503360 PLPP6Q8IY26 295 aa7.82□□□□□ -1.16
HMGB1P35-201ENST00000503360 PSEN2P49810 448 aa7.8□□□□□ -1.16
HMGB1P35-201ENST00000503360 STAC3Q96MF2 364 aa7.8□□□□□ -1.16
HMGB1P35-201ENST00000503360 DNAJC5Q9H3Z4 198 aa7.77□□□□□ -1.17
HMGB1P35-201ENST00000503360 VPS9D1Q9Y2B5 631 aa7.77□□□□□ -1.17
HMGB1P35-201ENST00000503360 DSG2Q14126 1118 aa7.76□□□□□ -1.17
HMGB1P35-201ENST00000503360 HS6ST3Q8IZP7 471 aa7.76□□□□□ -1.17
HMGB1P35-201ENST00000503360 OXER1Q8TDS5 423 aa7.76□□□□□ -1.17
HMGB1P35-201ENST00000503360 KCTD12Q96CX2 325 aaKnown RBP7.76□□□□□ -1.17
HMGB1P35-201ENST00000503360 BCL2L12Q9HB09 334 aa7.76□□□□□ -1.17
HMGB1P35-201ENST00000503360 KCNK17Q96T54 332 aa7.74□□□□□ -1.17
HMGB1P35-201ENST00000503360 RYDENQ9NUL5 291 aaKnown RBP7.74□□□□□ -1.17
HMGB1P35-201ENST00000503360 BHMG1C9JSJ3 638 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P35-201ENST00000503360 ANO8Q9HCE9 1232 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P35-201ENST00000503360 FOSBP53539 338 aa7.7□□□□□ -1.18
HMGB1P35-201ENST00000503360 THSD4Q6ZMP0 1018 aa7.7□□□□□ -1.18
HMGB1P35-201ENST00000503360 CRISPLD2Q9H0B8 497 aa7.7□□□□□ -1.18
HMGB1P35-201ENST00000503360 A0A0G2JS52 829 aa7.69□□□□□ -1.18
HMGB1P35-201ENST00000503360 ZBED2Q9BTP6 218 aa7.69□□□□□ -1.18
HMGB1P35-201ENST00000503360 PTPREP23469 700 aa7.68□□□□□ -1.18
HMGB1P35-201ENST00000503360 ZNF454Q8N9F8 522 aa7.68□□□□□ -1.18
HMGB1P35-201ENST00000503360 JPH4Q96JJ6 628 aa7.67□□□□□ -1.18
HMGB1P35-201ENST00000503360 NBPF3Q9H094 633 aa7.66□□□□□ -1.18
HMGB1P35-201ENST00000503360 PTPN5P54829 565 aa7.65□□□□□ -1.18
HMGB1P35-201ENST00000503360 GOLGA8CPA6NN73 597 aa7.64□□□□□ -1.19
HMGB1P35-201ENST00000503360 PPP1R15BQ5SWA1 713 aa7.64□□□□□ -1.19
HMGB1P35-201ENST00000503360 MRPL50Q8N5N7 158 aaKnown RBP7.64□□□□□ -1.19
HMGB1P35-201ENST00000503360 IRX2Q9BZI1 471 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P35-201ENST00000503360 PDE4AP27815 886 aa7.63□□□□□ -1.19
HMGB1P35-201ENST00000503360 WNT2BQ93097 391 aa7.63□□□□□ -1.19
HMGB1P35-201ENST00000503360 ZDHHC16Q969W1 377 aa7.63□□□□□ -1.19
HMGB1P35-201ENST00000503360 ITGBL1O95965 494 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P35-201ENST00000503360 NYAP1Q6ZVC0 841 aa7.61□□□□□ -1.19
HMGB1P35-201ENST00000503360 UPF1Q92900 1129 aaKnown RBP eCLIP7.61□□□□□ -1.19
HMGB1P35-201ENST00000503360 PPP1R3GB7ZBB8 358 aa7.59□□□□□ -1.19
HMGB1P35-201ENST00000503360 EVI5O60447 810 aa7.59□□□□□ -1.19
HMGB1P35-201ENST00000503360 LAPTM4BQ86VI4 370 aa7.59□□□□□ -1.19
HMGB1P35-201ENST00000503360 RABGEF1Q9UJ41 708 aa7.59□□□□□ -1.19
HMGB1P35-201ENST00000503360 ONECUT3O60422 494 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P35-201ENST00000503360 CHGAP10645 457 aaKnown RBP7.58□□□□□ -1.2
HMGB1P35-201ENST00000503360 ADAM33Q9BZ11 813 aa7.58□□□□□ -1.2
HMGB1P35-201ENST00000503360 NKX1-1Q15270 411 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P35-201ENST00000503360 NCKAP5LQ9HCH0 1330 aa7.56□□□□□ -1.2
HMGB1P35-201ENST00000503360 MFSD10Q14728 455 aa7.56□□□□□ -1.2
HMGB1P35-201ENST00000503360 FBXW7Q969H0 707 aa7.56□□□□□ -1.2
HMGB1P35-201ENST00000503360 ANKK1Q8NFD2 765 aa7.55□□□□□ -1.2
HMGB1P35-201ENST00000503360 DDX27Q96GQ7 796 aaKnown RBP7.53□□□□□ -1.2
HMGB1P35-201ENST00000503360 SOWAHBA6NEL2 793 aa7.52□□□□□ -1.21
HMGB1P35-201ENST00000503360 PHF14O94880 888 aa7.52□□□□□ -1.21
HMGB1P35-201ENST00000503360 MAP3K9P80192 1104 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms