RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 SEMA3EO15041 775 aa17.82■□□□□ 0.44
EXOSC9-203ENST00000503139 OCEL1Q9H607 264 aa17.81■□□□□ 0.44
EXOSC9-203ENST00000503139 GABBR2O75899 941 aa17.8■□□□□ 0.44
EXOSC9-203ENST00000503139 PPP1R15BQ5SWA1 713 aa17.8■□□□□ 0.44
EXOSC9-203ENST00000503139 TMEM121BQ9BXQ6 578 aaPredicted RBP17.78■□□□□ 0.44
EXOSC9-203ENST00000503139 TULP1O00294 542 aaPredicted RBP17.75■□□□□ 0.43
EXOSC9-203ENST00000503139 BOLA1Q9Y3E2 137 aa17.73■□□□□ 0.43
EXOSC9-203ENST00000503139 DSG2Q14126 1118 aa17.72■□□□□ 0.43
EXOSC9-203ENST00000503139 PLCG2P16885 1265 aa17.7■□□□□ 0.42
EXOSC9-203ENST00000503139 FOXK1P85037 733 aa17.69■□□□□ 0.42
EXOSC9-203ENST00000503139 TMC2Q8TDI7 906 aa17.69■□□□□ 0.42
EXOSC9-203ENST00000503139 PELP1Q8IZL8 1130 aaKnown RBP17.68■□□□□ 0.42
EXOSC9-203ENST00000503139 EMILIN3Q9NT22 766 aa17.67■□□□□ 0.42
EXOSC9-203ENST00000503139 KIF3CO14782 793 aa17.66■□□□□ 0.42
EXOSC9-203ENST00000503139 C2orf72A6NCS6 295 aa17.62■□□□□ 0.41
EXOSC9-203ENST00000503139 DCBLD2Q96PD2 775 aa17.62■□□□□ 0.41
EXOSC9-203ENST00000503139 COLQQ9Y215 455 aaPredicted RBP17.62■□□□□ 0.41
EXOSC9-203ENST00000503139 ZC3H15Q8WU90 426 aaKnown RBP17.61■□□□□ 0.41
EXOSC9-203ENST00000503139 G3V3G9 751 aa17.6■□□□□ 0.41
EXOSC9-203ENST00000503139 SMYD5Q6GMV2 418 aa17.6■□□□□ 0.41
EXOSC9-203ENST00000503139 L3MBTL3Q96JM7 780 aaPredicted RBP17.6■□□□□ 0.41
EXOSC9-203ENST00000503139 DPYSL4O14531 572 aa17.58■□□□□ 0.4
EXOSC9-203ENST00000503139 PLPP6Q8IY26 295 aa17.57■□□□□ 0.4
EXOSC9-203ENST00000503139 SEC24BO95487 1268 aa17.56■□□□□ 0.4
EXOSC9-203ENST00000503139 POTEFA5A3E0 1075 aa17.55■□□□□ 0.4
EXOSC9-203ENST00000503139 PDIA6Q15084 440 aa17.55■□□□□ 0.4
EXOSC9-203ENST00000503139 SLC39A7Q92504 469 aa17.55■□□□□ 0.4
EXOSC9-203ENST00000503139 MLLT3P42568 568 aaPredicted RBP17.54■□□□□ 0.4
EXOSC9-203ENST00000503139 TMEM92Q6UXU6 159 aa17.54■□□□□ 0.4
EXOSC9-203ENST00000503139 SPDYE16A6NNV3 312 aaPredicted RBP17.52■□□□□ 0.4
EXOSC9-203ENST00000503139 C7P10643 843 aa17.5■□□□□ 0.39
EXOSC9-203ENST00000503139 POTEIP0CG38 1075 aa17.49■□□□□ 0.39
EXOSC9-203ENST00000503139 METRNQ9UJH8 293 aa17.46■□□□□ 0.39
EXOSC9-203ENST00000503139 ZMYND10O75800 440 aa17.44■□□□□ 0.38
EXOSC9-203ENST00000503139 RBM26Q5T8P6 1007 aaKnown RBP17.43■□□□□ 0.38
EXOSC9-203ENST00000503139 OXER1Q8TDS5 423 aa17.39■□□□□ 0.37
EXOSC9-203ENST00000503139 SLC24A3Q9HC58 644 aa17.38■□□□□ 0.37
EXOSC9-203ENST00000503139 MAP3K9P80192 1104 aa17.36■□□□□ 0.37
EXOSC9-203ENST00000503139 GPIHBP1Q8IV16 184 aa17.36■□□□□ 0.37
EXOSC9-203ENST00000503139 SP7Q8TDD2 431 aaPredicted RBP17.36■□□□□ 0.37
EXOSC9-203ENST00000503139 BARGINQ6ZT62 677 aa17.35■□□□□ 0.37
EXOSC9-203ENST00000503139 UPF1Q92900 1129 aaKnown RBP eCLIP17.34■□□□□ 0.37
EXOSC9-203ENST00000503139 BRPF1P55201 1214 aaPredicted RBP17.32■□□□□ 0.36
EXOSC9-203ENST00000503139 C3orf67Q6ZVT6 689 aa17.31■□□□□ 0.36
EXOSC9-203ENST00000503139 PTGER2P43116 358 aa17.26■□□□□ 0.35
EXOSC9-203ENST00000503139 TMEM132AQ24JP5 1023 aa17.26■□□□□ 0.35
EXOSC9-203ENST00000503139 GRXCR2A6NFK2 248 aa17.24■□□□□ 0.35
EXOSC9-203ENST00000503139 GPR37O15354 613 aa17.24■□□□□ 0.35
EXOSC9-203ENST00000503139 PTCD2Q8WV60 388 aaKnown RBP17.24■□□□□ 0.35
EXOSC9-203ENST00000503139 SLC34A2O95436 690 aa17.21■□□□□ 0.35
EXOSC9-203ENST00000503139 OSBPP22059 807 aa17.21■□□□□ 0.35
EXOSC9-203ENST00000503139 TBC1D12O60347 775 aa17.2■□□□□ 0.34
EXOSC9-203ENST00000503139 EVI5O60447 810 aa17.2■□□□□ 0.34
EXOSC9-203ENST00000503139 NEUROD2Q15784 382 aa17.17■□□□□ 0.34
EXOSC9-203ENST00000503139 DDX12PQ92771 950 aa17.16■□□□□ 0.34
EXOSC9-203ENST00000503139 AK7Q96M32 723 aa17.16■□□□□ 0.34
EXOSC9-203ENST00000503139 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.16■□□□□ 0.34
EXOSC9-203ENST00000503139 KRI1Q8N9T8 703 aaKnown RBP17.12■□□□□ 0.33
EXOSC9-203ENST00000503139 ANO8Q9HCE9 1232 aaPredicted RBP17.12■□□□□ 0.33
EXOSC9-203ENST00000503139 PRIM1P49642 420 aaKnown RBP17.11■□□□□ 0.33
EXOSC9-203ENST00000503139 NUTM2FA1L443 756 aa17.09■□□□□ 0.33
EXOSC9-203ENST00000503139 ZNF316A6NFI3 1004 aaPredicted RBP17.08■□□□□ 0.32
EXOSC9-203ENST00000503139 GTF3C3Q9Y5Q9 886 aa17.05■□□□□ 0.32
EXOSC9-203ENST00000503139 TRIM66O15016 1216 aa17.03■□□□□ 0.32
EXOSC9-203ENST00000503139 POTEJP0CG39 1038 aa17.03■□□□□ 0.32
EXOSC9-203ENST00000503139 PCDHGA4Q9Y5G9 962 aa17.03■□□□□ 0.32
EXOSC9-203ENST00000503139 FCHSD2O94868 740 aa17.01■□□□□ 0.31
EXOSC9-203ENST00000503139 MINK1Q8N4C8 1332 aaPredicted RBP17■□□□□ 0.31
EXOSC9-203ENST00000503139 GNPATO15228 680 aa17■□□□□ 0.31
EXOSC9-203ENST00000503139 MAP2K5Q13163 448 aa17■□□□□ 0.31
EXOSC9-203ENST00000503139 HIC1Q14526 733 aa17■□□□□ 0.31
EXOSC9-203ENST00000503139 KDM4FA0A1W2PPD8 638 aa16.99■□□□□ 0.31
EXOSC9-203ENST00000503139 PHF14O94880 888 aa16.98■□□□□ 0.31
EXOSC9-203ENST00000503139 GPBP1L1Q9HC44 474 aaPredicted RBP16.98■□□□□ 0.31
EXOSC9-203ENST00000503139 PDE4DQ08499 809 aa16.97■□□□□ 0.31
EXOSC9-203ENST00000503139 PTGDRQ13258 359 aa16.97■□□□□ 0.31
EXOSC9-203ENST00000503139 EPAS1Q99814 870 aa16.96■□□□□ 0.31
EXOSC9-203ENST00000503139 POTEB2H3BUK9 544 aa16.95■□□□□ 0.3
EXOSC9-203ENST00000503139 FECHP22830 423 aa16.95■□□□□ 0.3
EXOSC9-203ENST00000503139 EN1Q05925 392 aaPredicted RBP16.95■□□□□ 0.3
EXOSC9-203ENST00000503139 CCDC102AQ96A19 550 aa16.95■□□□□ 0.3
EXOSC9-203ENST00000503139 IRF6O14896 467 aa16.94■□□□□ 0.3
EXOSC9-203ENST00000503139 PCDHGA10Q9Y5H3 936 aa16.94■□□□□ 0.3
EXOSC9-203ENST00000503139 KDM4CQ9H3R0 1056 aa16.91■□□□□ 0.3
EXOSC9-203ENST00000503139 CDHR5Q9HBB8 845 aa16.91■□□□□ 0.3
EXOSC9-203ENST00000503139 NPDC1Q9NQX5 325 aaPredicted RBP16.89■□□□□ 0.29
EXOSC9-203ENST00000503139 HOXB3P14651 431 aaPredicted RBP16.88■□□□□ 0.29
EXOSC9-203ENST00000503139 SLAIN1Q8ND83 568 aa16.88■□□□□ 0.29
EXOSC9-203ENST00000503139 JPH4Q96JJ6 628 aa16.88■□□□□ 0.29
EXOSC9-203ENST00000503139 TYW1BQ6NUM6 668 aa16.87■□□□□ 0.29
EXOSC9-203ENST00000503139 MAP3K7O43318 606 aa16.86■□□□□ 0.29
EXOSC9-203ENST00000503139 TIMELESSQ9UNS1 1208 aa16.86■□□□□ 0.29
EXOSC9-203ENST00000503139 AMHR2Q16671 573 aa16.85■□□□□ 0.29
EXOSC9-203ENST00000503139 DOK7Q18PE1 504 aa16.84■□□□□ 0.29
EXOSC9-203ENST00000503139 RBM33Q96EV2 1170 aaKnown RBP16.84■□□□□ 0.29
EXOSC9-203ENST00000503139 FOSBP53539 338 aa16.83■□□□□ 0.28
EXOSC9-203ENST00000503139 TSR1Q2NL82 804 aaKnown RBP16.83■□□□□ 0.28
EXOSC9-203ENST00000503139 FBXW7Q969H0 707 aa16.83■□□□□ 0.28
EXOSC9-203ENST00000503139 ARSIQ5FYB1 569 aa16.79■□□□□ 0.28
EXOSC9-203ENST00000503139 KHSRPQ92945 711 aaKnown RBP eCLIP16.79■□□□□ 0.282e-7■■□□□ 13.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms