RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 MYO15BQ96JP2 1530 aa6.08□□□□□ -1.44
NEAT1-202ENST00000501122 HTATSF1O43719 755 aaKnown RBP6.07□□□□□ -1.44
NEAT1-202ENST00000501122 DRC7Q8IY82 874 aa6.07□□□□□ -1.44
NEAT1-202ENST00000501122 PAK3O75914 559 aaPredicted RBP6.07□□□□□ -1.44
NEAT1-202ENST00000501122 RGS3P49796 1198 aa6.06□□□□□ -1.44
NEAT1-202ENST00000501122 ZRSR1Q15695 479 aaKnown RBP6.06□□□□□ -1.44
NEAT1-202ENST00000501122 SPRYD3Q8NCJ5 442 aa6.06□□□□□ -1.44
NEAT1-202ENST00000501122 PAIP2Q9BPZ3 127 aaKnown RBP6.06□□□□□ -1.44
NEAT1-202ENST00000501122 GBP4Q96PP9 640 aa6.05□□□□□ -1.44
NEAT1-202ENST00000501122 DNAJC2Q99543 621 aaKnown RBP6.05□□□□□ -1.44
NEAT1-202ENST00000501122 RBM28Q9NW13 759 aaKnown RBP6.05□□□□□ -1.44
NEAT1-202ENST00000501122 IPO4Q8TEX9 1081 aaKnown RBP6.05□□□□□ -1.44
NEAT1-202ENST00000501122 GPATCH11Q8N954 259 aa6.04□□□□□ -1.44
NEAT1-202ENST00000501122 KCNJ4P48050 445 aa6.04□□□□□ -1.44
NEAT1-202ENST00000501122 RDXP35241 583 aaKnown RBP6.04□□□□□ -1.44
NEAT1-202ENST00000501122 GTF2A1P52655 376 aaPredicted RBP6.04□□□□□ -1.44
NEAT1-202ENST00000501122 ZHX1Q9UKY1 873 aaPredicted RBP6.04□□□□□ -1.44
NEAT1-202ENST00000501122 HSP90AB1P08238 724 aaKnown RBP6.03□□□□□ -1.44
NEAT1-202ENST00000501122 R3HCC1Q9Y3T6 440 aaKnown RBP6.03□□□□□ -1.44
NEAT1-202ENST00000501122 LMOD3Q0VAK6 560 aa6.03□□□□□ -1.44
NEAT1-202ENST00000501122 GOLGA6L4A6NEF3 574 aa6.03□□□□□ -1.44
NEAT1-202ENST00000501122 RSPH4AQ5TD94 716 aa6.02□□□□□ -1.45
NEAT1-202ENST00000501122 HIRIP3Q9BW71 556 aaPredicted RBP6.02□□□□□ -1.45
NEAT1-202ENST00000501122 HDAC5Q9UQL6 1122 aa6.02□□□□□ -1.45
NEAT1-202ENST00000501122 HSP90AB3PQ58FF7 597 aa6.01□□□□□ -1.45
NEAT1-202ENST00000501122 DCAF1Q9Y4B6 1507 aa6.01□□□□□ -1.45
NEAT1-202ENST00000501122 AAMPQ13685 434 aa6.01□□□□□ -1.45
NEAT1-202ENST00000501122 CFAP44Q96MT7 982 aa6.01□□□□□ -1.45
NEAT1-202ENST00000501122 KIF3AQ9Y496 699 aa6.01□□□□□ -1.45
NEAT1-202ENST00000501122 DYDC1Q8WWB3 177 aa6.01□□□□□ -1.45
NEAT1-202ENST00000501122 FRAT1Q92837 279 aaPredicted RBP6.01□□□□□ -1.45
NEAT1-202ENST00000501122 CGNQ9P2M7 1197 aaKnown RBP6.01□□□□□ -1.45
NEAT1-202ENST00000501122 TMC1Q8TDI8 760 aa6.01□□□□□ -1.45
NEAT1-202ENST00000501122 CALCOCO1Q9P1Z2 691 aa6□□□□□ -1.45
NEAT1-202ENST00000501122 SKOR2Q2VWA4 1001 aaPredicted RBP6□□□□□ -1.45
NEAT1-202ENST00000501122 HSCBQ8IWL3 235 aa6□□□□□ -1.45
NEAT1-202ENST00000501122 USP8P40818 1118 aa6□□□□□ -1.45
NEAT1-202ENST00000501122 CALD1Q05682 793 aaKnown RBP6□□□□□ -1.45
NEAT1-202ENST00000501122 CLSTN1O94985 981 aa6□□□□□ -1.45
NEAT1-202ENST00000501122 TIGD1Q96MW7 591 aa6□□□□□ -1.45
NEAT1-202ENST00000501122 MRS2Q9HD23 443 aa5.99□□□□□ -1.45
NEAT1-202ENST00000501122 DIAPH3Q9NSV4 1193 aa5.99□□□□□ -1.45
NEAT1-202ENST00000501122 FBXO3Q9UK99 471 aa5.99□□□□□ -1.45
NEAT1-202ENST00000501122 BANK1Q8NDB2 785 aa5.99□□□□□ -1.45
NEAT1-202ENST00000501122 SYAP1Q96A49 352 aaPredicted RBP5.99□□□□□ -1.45
NEAT1-202ENST00000501122 NISCHQ9Y2I1 1504 aa5.99□□□□□ -1.45
NEAT1-202ENST00000501122 TMCO5BA8MYB1 307 aa5.99□□□□□ -1.45
NEAT1-202ENST00000501122 TAOK2Q9UL54 1235 aa5.99□□□□□ -1.45
NEAT1-202ENST00000501122 MRE11P49959 708 aa5.99□□□□□ -1.45
NEAT1-202ENST00000501122 GON4LQ3T8J9 2241 aa5.99□□□□□ -1.45
NEAT1-202ENST00000501122 NOC3LQ8WTT2 800 aaKnown RBP5.98□□□□□ -1.45
NEAT1-202ENST00000501122 RRP12Q5JTH9 1297 aaKnown RBP5.98□□□□□ -1.45
NEAT1-202ENST00000501122 RBM25P49756 843 aaKnown RBP5.98□□□□□ -1.45
NEAT1-202ENST00000501122 TMX4Q9H1E5 349 aaPredicted RBP5.98□□□□□ -1.45
NEAT1-202ENST00000501122 PRDM10Q9NQV6 1147 aa5.98□□□□□ -1.45
NEAT1-202ENST00000501122 TDO2P48775 406 aa5.98□□□□□ -1.45
NEAT1-202ENST00000501122 HMGN5P82970 282 aaKnown RBP5.98□□□□□ -1.45
NEAT1-202ENST00000501122 GIMAP7Q8NHV1 300 aa5.98□□□□□ -1.45
NEAT1-202ENST00000501122 GTPBP4Q9BZE4 634 aaKnown RBP5.98□□□□□ -1.45
NEAT1-202ENST00000501122 MPHOSPH10O00566 681 aaKnown RBP5.98□□□□□ -1.45
NEAT1-202ENST00000501122 ZNF622Q969S3 477 aaKnown RBP eCLIP5.98□□□□□ -1.45
NEAT1-202ENST00000501122 MNS1Q8NEH6 495 aa5.97□□□□□ -1.45
NEAT1-202ENST00000501122 KIAA1211Q6ZU35 1233 aa5.97□□□□□ -1.45
NEAT1-202ENST00000501122 AK7Q96M32 723 aa5.97□□□□□ -1.45
NEAT1-202ENST00000501122 SETSIPP0DME0 302 aa5.97□□□□□ -1.45
NEAT1-202ENST00000501122 GOLIM4O00461 696 aa5.96□□□□□ -1.45
NEAT1-202ENST00000501122 NFKBIBQ15653 356 aa5.96□□□□□ -1.45
NEAT1-202ENST00000501122 SLKQ9H2G2 1235 aaPredicted RBP5.96□□□□□ -1.46
NEAT1-202ENST00000501122 VGLL3A8MV65 326 aa5.95□□□□□ -1.46
NEAT1-202ENST00000501122 TNNT1P13805 278 aa5.95□□□□□ -1.46
NEAT1-202ENST00000501122 FAM50AQ14320 339 aaKnown RBP5.95□□□□□ -1.46
NEAT1-202ENST00000501122 MRVI1Q9Y6F6 885 aa5.95□□□□□ -1.46
NEAT1-202ENST00000501122 LETM1O95202 739 aaPredicted RBP5.95□□□□□ -1.46
NEAT1-202ENST00000501122 DDX11L8A8MPP1 907 aa5.95□□□□□ -1.46
NEAT1-202ENST00000501122 PDCL2Q8N4E4 241 aa5.95□□□□□ -1.46
NEAT1-202ENST00000501122 GOLGA6L10A6NI86 522 aa5.95□□□□□ -1.46
NEAT1-202ENST00000501122 ESPNB1AK53 854 aa5.95□□□□□ -1.46
NEAT1-202ENST00000501122 CTR9Q6PD62 1173 aa5.95□□□□□ -1.46
NEAT1-202ENST00000501122 PES1O00541 588 aaKnown RBP5.95□□□□□ -1.46
NEAT1-202ENST00000501122 ZBTB12Q9Y330 459 aaPredicted RBP5.95□□□□□ -1.46
NEAT1-202ENST00000501122 H0YHG0 523 aa5.95□□□□□ -1.46
NEAT1-202ENST00000501122 SARNPP82979 210 aaKnown RBP5.95□□□□□ -1.46
NEAT1-202ENST00000501122 PHF14O94880 888 aa5.94□□□□□ -1.46
NEAT1-202ENST00000501122 CCDC191Q8NCU4 936 aa5.94□□□□□ -1.46
NEAT1-202ENST00000501122 ARID4AP29374 1257 aaPredicted RBP5.94□□□□□ -1.46
NEAT1-202ENST00000501122 LEKR1Q6ZMV7 388 aa5.94□□□□□ -1.46
NEAT1-202ENST00000501122 CBX1P83916 185 aa5.94□□□□□ -1.46
NEAT1-202ENST00000501122 SUDS3Q9H7L9 328 aaPredicted RBP5.93□□□□□ -1.46
NEAT1-202ENST00000501122 WDR43Q15061 677 aaKnown RBP eCLIP5.93□□□□□ -1.46
NEAT1-202ENST00000501122 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.93□□□□□ -1.46
NEAT1-202ENST00000501122 CASC1Q6TDU7 716 aa5.93□□□□□ -1.46
NEAT1-202ENST00000501122 ARGLU1Q9NWB6 273 aaPredicted RBP5.93□□□□□ -1.46
NEAT1-202ENST00000501122 GOLGA6L19H0YKK7 550 aa5.93□□□□□ -1.46
NEAT1-202ENST00000501122 CPSF2Q9P2I0 782 aaKnown RBP5.93□□□□□ -1.46
NEAT1-202ENST00000501122 PPP4R3BQ5MIZ7 849 aa5.92□□□□□ -1.46
NEAT1-202ENST00000501122 SMAP1Q8IYB5 467 aaPredicted RBP5.92□□□□□ -1.46
NEAT1-202ENST00000501122 CNPY4Q8N129 248 aa5.92□□□□□ -1.46
NEAT1-202ENST00000501122 ERICH4A6NGS2 130 aa5.92□□□□□ -1.46
NEAT1-202ENST00000501122 UQCRHLA0A096LP55 91 aa5.92□□□□□ -1.46
NEAT1-202ENST00000501122 UQCRHP07919 91 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms