RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 IFNL1Q8IU54 200 aa11.93□□□□□ -0.5
PMPCB-208ENST00000498530 MFRPQ9BY79 579 aa11.92□□□□□ -0.5
PMPCB-208ENST00000498530 BRPF1P55201 1214 aaPredicted RBP11.91□□□□□ -0.5
PMPCB-208ENST00000498530 C14orf37Q86TY3 774 aa11.89□□□□□ -0.51
PMPCB-208ENST00000498530 TMEM106CQ9BVX2 250 aa11.89□□□□□ -0.51
PMPCB-208ENST00000498530 PLCG2P16885 1265 aa11.87□□□□□ -0.51
PMPCB-208ENST00000498530 IRX5P78411 483 aaPredicted RBP11.86□□□□□ -0.51
PMPCB-208ENST00000498530 ZC3H15Q8WU90 426 aaKnown RBP11.85□□□□□ -0.51
PMPCB-208ENST00000498530 TESPA1A2RU30 521 aaPredicted RBP11.84□□□□□ -0.51
PMPCB-208ENST00000498530 PSEN1P49768 467 aa11.84□□□□□ -0.51
PMPCB-208ENST00000498530 E2F4Q16254 413 aa11.84□□□□□ -0.51
PMPCB-208ENST00000498530 PCDHB8Q9UN66 801 aa11.83□□□□□ -0.52
PMPCB-208ENST00000498530 FBXO22Q8NEZ5 403 aa11.81□□□□□ -0.52
PMPCB-208ENST00000498530 MMRN1Q13201 1228 aa11.79□□□□□ -0.52
PMPCB-208ENST00000498530 NLRP6P59044 892 aa11.78□□□□□ -0.52
PMPCB-208ENST00000498530 SPNS2Q8IVW8 549 aa11.78□□□□□ -0.52
PMPCB-208ENST00000498530 DAXXQ9UER7 740 aaPredicted RBP11.78□□□□□ -0.52
PMPCB-208ENST00000498530 SOX12O15370 315 aa11.77□□□□□ -0.53
PMPCB-208ENST00000498530 PPP1R37O75864 691 aa11.77□□□□□ -0.53
PMPCB-208ENST00000498530 HOMEZQ8IX15 550 aa11.77□□□□□ -0.53
PMPCB-208ENST00000498530 TMEM121BQ9BXQ6 578 aaPredicted RBP11.77□□□□□ -0.53
PMPCB-208ENST00000498530 OCEL1Q9H607 264 aa11.76□□□□□ -0.53
PMPCB-208ENST00000498530 SEMA3EO15041 775 aa11.75□□□□□ -0.53
PMPCB-208ENST00000498530 ARIH1Q9Y4X5 557 aaPredicted RBP11.75□□□□□ -0.53
PMPCB-208ENST00000498530 NEUROD2Q15784 382 aa11.74□□□□□ -0.53
PMPCB-208ENST00000498530 ZMYND10O75800 440 aa11.72□□□□□ -0.53
PMPCB-208ENST00000498530 SLC24A3Q9HC58 644 aa11.72□□□□□ -0.53
PMPCB-208ENST00000498530 SNPHO15079 494 aa11.71□□□□□ -0.53
PMPCB-208ENST00000498530 MFSD10Q14728 455 aa11.71□□□□□ -0.53
PMPCB-208ENST00000498530 EFCAB3Q8N7B9 438 aa11.71□□□□□ -0.53
PMPCB-208ENST00000498530 MARVELD3Q96A59 401 aa11.71□□□□□ -0.53
PMPCB-208ENST00000498530 SMYD5Q6GMV2 418 aa11.7□□□□□ -0.54
PMPCB-208ENST00000498530 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.7□□□□□ -0.54
PMPCB-208ENST00000498530 NCKAP5LQ9HCH0 1330 aa11.69□□□□□ -0.54
PMPCB-208ENST00000498530 PHF8Q9UPP1 1060 aa11.69□□□□□ -0.54
PMPCB-208ENST00000498530 CABP2Q9NPB3 220 aa11.66□□□□□ -0.54
PMPCB-208ENST00000498530 PDE4AP27815 886 aa11.65□□□□□ -0.54
PMPCB-208ENST00000498530 CRISPLD2Q9H0B8 497 aa11.65□□□□□ -0.54
PMPCB-208ENST00000498530 BARGINQ6ZT62 677 aa11.63□□□□□ -0.55
PMPCB-208ENST00000498530 CAMK2BQ13554 666 aa11.62□□□□□ -0.55
PMPCB-208ENST00000498530 PDCD7Q8N8D1 485 aaKnown RBP11.62□□□□□ -0.55
PMPCB-208ENST00000498530 LARP6Q9BRS8 491 aaKnown RBP11.61□□□□□ -0.55
PMPCB-208ENST00000498530 DDX27Q96GQ7 796 aaKnown RBP11.59□□□□□ -0.55
PMPCB-208ENST00000498530 MS4A4AQ96JQ5 239 aa11.58□□□□□ -0.56
PMPCB-208ENST00000498530 EMP3P54852 163 aa11.57□□□□□ -0.56
PMPCB-208ENST00000498530 C3orf67Q6ZVT6 689 aa11.56□□□□□ -0.56
PMPCB-208ENST00000498530 POTEB3A0JP26 581 aa11.55□□□□□ -0.56
PMPCB-208ENST00000498530 POTEBQ6S5H4 581 aa11.55□□□□□ -0.56
PMPCB-208ENST00000498530 KRTAP3-3Q9BYR6 98 aa11.55□□□□□ -0.56
PMPCB-208ENST00000498530 KRTAP3-2Q9BYR7 98 aa11.55□□□□□ -0.56
PMPCB-208ENST00000498530 AK7Q96M32 723 aa11.54□□□□□ -0.56
PMPCB-208ENST00000498530 HS3ST6Q96QI5 342 aa11.53□□□□□ -0.56
PMPCB-208ENST00000498530 L3MBTL3Q96JM7 780 aaPredicted RBP11.51□□□□□ -0.57
PMPCB-208ENST00000498530 MKRN3Q13064 507 aaKnown RBP11.5□□□□□ -0.57
PMPCB-208ENST00000498530 GPIHBP1Q8IV16 184 aa11.5□□□□□ -0.57
PMPCB-208ENST00000498530 FAM205CA6NFA0 338 aa11.49□□□□□ -0.57
PMPCB-208ENST00000498530 GOLGA2Q08379 1002 aa11.48□□□□□ -0.57
PMPCB-208ENST00000498530 SUPT5HO00267 1087 aaKnown RBP11.46□□□□□ -0.57
PMPCB-208ENST00000498530 RBM26Q5T8P6 1007 aaKnown RBP11.46□□□□□ -0.57
PMPCB-208ENST00000498530 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.46□□□□□ -0.575e-7■■□□□ 13.1
PMPCB-208ENST00000498530 MLLT3P42568 568 aaPredicted RBP11.44□□□□□ -0.58
PMPCB-208ENST00000498530 ILDR1Q86SU0 546 aaPredicted RBP11.43□□□□□ -0.58
PMPCB-208ENST00000498530 GPBP1L1Q9HC44 474 aaPredicted RBP11.43□□□□□ -0.58
PMPCB-208ENST00000498530 PPP1R15BQ5SWA1 713 aa11.42□□□□□ -0.58
PMPCB-208ENST00000498530 KDM4CQ9H3R0 1056 aa11.42□□□□□ -0.58
PMPCB-208ENST00000498530 SPDYE16A6NNV3 312 aaPredicted RBP11.41□□□□□ -0.58
PMPCB-208ENST00000498530 GPHNQ9NQX3 736 aaPredicted RBP11.41□□□□□ -0.58
PMPCB-208ENST00000498530 TRIM66O15016 1216 aa11.4□□□□□ -0.58
PMPCB-208ENST00000498530 PDIA6Q15084 440 aa11.39□□□□□ -0.59
PMPCB-208ENST00000498530 KRI1Q8N9T8 703 aaKnown RBP11.39□□□□□ -0.59
PMPCB-208ENST00000498530 PDE4DQ08499 809 aa11.38□□□□□ -0.59
PMPCB-208ENST00000498530 DPY19L2Q6NUT2 758 aa11.38□□□□□ -0.59
PMPCB-208ENST00000498530 HOXB3P14651 431 aaPredicted RBP11.37□□□□□ -0.59
PMPCB-208ENST00000498530 ZMYND15Q9H091 742 aa11.36□□□□□ -0.59
PMPCB-208ENST00000498530 GPR37O15354 613 aa11.35□□□□□ -0.59
PMPCB-208ENST00000498530 IL27Q8NEV9 243 aa11.35□□□□□ -0.59
PMPCB-208ENST00000498530 RSPH6AQ9H0K4 717 aa11.33□□□□□ -0.6
PMPCB-208ENST00000498530 EMILIN3Q9NT22 766 aa11.33□□□□□ -0.6
PMPCB-208ENST00000498530 DPYSL4O14531 572 aa11.32□□□□□ -0.6
PMPCB-208ENST00000498530 BOLA1Q9Y3E2 137 aa11.32□□□□□ -0.6
PMPCB-208ENST00000498530 HOXB1P14653 301 aaPredicted RBP11.3□□□□□ -0.6
PMPCB-208ENST00000498530 DSG2Q14126 1118 aa11.28□□□□□ -0.6
PMPCB-208ENST00000498530 G3V3G9 751 aa11.27□□□□□ -0.61
PMPCB-208ENST00000498530 FOXK1P85037 733 aa11.27□□□□□ -0.61
PMPCB-208ENST00000498530 MINK1Q8N4C8 1332 aaPredicted RBP11.27□□□□□ -0.61
PMPCB-208ENST00000498530 ZNF710Q8N1W2 664 aa11.26□□□□□ -0.61
PMPCB-208ENST00000498530 MAP2K5Q13163 448 aa11.25□□□□□ -0.61
PMPCB-208ENST00000498530 AMHR2Q16671 573 aa11.25□□□□□ -0.61
PMPCB-208ENST00000498530 DDRGK1Q96HY6 314 aa11.25□□□□□ -0.61
PMPCB-208ENST00000498530 ERBB3P21860 1342 aa11.25□□□□□ -0.61
PMPCB-208ENST00000498530 DOK7Q18PE1 504 aa11.24□□□□□ -0.61
PMPCB-208ENST00000498530 RNF166Q96A37 237 aaPredicted RBP11.23□□□□□ -0.61
PMPCB-208ENST00000498530 FAM117AQ9C073 453 aa11.23□□□□□ -0.61
PMPCB-208ENST00000498530 UBTFP17480 764 aaKnown RBP11.21□□□□□ -0.61
PMPCB-208ENST00000498530 MICALL2Q8IY33 904 aa11.21□□□□□ -0.61
PMPCB-208ENST00000498530 CCDC102AQ96A19 550 aa11.21□□□□□ -0.61
PMPCB-208ENST00000498530 PLEKHG3A1L390 1219 aa11.2□□□□□ -0.62
PMPCB-208ENST00000498530 TMC2Q8TDI7 906 aa11.2□□□□□ -0.62
PMPCB-208ENST00000498530 ZNF316A6NFI3 1004 aaPredicted RBP11.19□□□□□ -0.62
PMPCB-208ENST00000498530 GOPCQ9HD26 462 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms