RNA–Protein interactions for RNA: ENST00000497715.1

CUL3-212, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 2,400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-212ENST00000497715 FAM50AQ14320 339 aaKnown RBP6.83□□□□□ -1.32
CUL3-212ENST00000497715 FAM177A1Q8N128 213 aaPredicted RBP6.82□□□□□ -1.32
CUL3-212ENST00000497715 MCCP23508 829 aa6.82□□□□□ -1.32
CUL3-212ENST00000497715 PTMSP20962 102 aa6.81□□□□□ -1.32
CUL3-212ENST00000497715 FOXD4L5Q5VV16 416 aaPredicted RBP6.81□□□□□ -1.32
CUL3-212ENST00000497715 FOXD4L4Q8WXT5 416 aaPredicted RBP6.81□□□□□ -1.32
CUL3-212ENST00000497715 C1orf115Q9H7X2 142 aa6.81□□□□□ -1.32
CUL3-212ENST00000497715 GPATCH11Q8N954 259 aa6.81□□□□□ -1.32
CUL3-212ENST00000497715 SLC4A1APQ9BWU0 796 aaKnown RBP6.81□□□□□ -1.32
CUL3-212ENST00000497715 E9PSI1 815 aa6.8□□□□□ -1.32
CUL3-212ENST00000497715 IRX3P78415 501 aaPredicted RBP6.8□□□□□ -1.32
CUL3-212ENST00000497715 CCDC27Q2M243 656 aa6.8□□□□□ -1.32
CUL3-212ENST00000497715 P3H3Q8IVL6 736 aa6.8□□□□□ -1.32
CUL3-212ENST00000497715 ZBTB22O15209 634 aa6.8□□□□□ -1.32
CUL3-212ENST00000497715 HSP90AA1P07900 732 aaKnown RBP6.8□□□□□ -1.32
CUL3-212ENST00000497715 APPP05067 770 aa6.79□□□□□ -1.32
CUL3-212ENST00000497715 NPM1P06748 294 aaKnown RBP eCLIP6.79□□□□□ -1.32
CUL3-212ENST00000497715 NGEFQ8N5V2 710 aa6.79□□□□□ -1.32
CUL3-212ENST00000497715 CLGNO14967 610 aa6.79□□□□□ -1.32
CUL3-212ENST00000497715 DNAJC2Q99543 621 aaKnown RBP6.79□□□□□ -1.32
CUL3-212ENST00000497715 PPM1GO15355 546 aaPredicted RBP6.78□□□□□ -1.32
CUL3-212ENST00000497715 CC2D2BQ6DHV5 1058 aa6.78□□□□□ -1.32
CUL3-212ENST00000497715 ZHX1Q9UKY1 873 aaPredicted RBP6.78□□□□□ -1.32
CUL3-212ENST00000497715 MMP14P50281 582 aa6.78□□□□□ -1.32
CUL3-212ENST00000497715 PSEN1P49768 467 aa6.77□□□□□ -1.33
CUL3-212ENST00000497715 RBM25P49756 843 aaKnown RBP6.77□□□□□ -1.33
CUL3-212ENST00000497715 PAK3O75914 559 aaPredicted RBP6.76□□□□□ -1.33
CUL3-212ENST00000497715 RGL3Q3MIN7 710 aa6.76□□□□□ -1.33
CUL3-212ENST00000497715 RBM42Q9BTD8 480 aaKnown RBP6.76□□□□□ -1.33
CUL3-212ENST00000497715 SH3BP1Q9Y3L3 701 aa6.76□□□□□ -1.33
CUL3-212ENST00000497715 ZNF622Q969S3 477 aaKnown RBP eCLIP6.76□□□□□ -1.33
CUL3-212ENST00000497715 CHMP4CQ96CF2 233 aa6.76□□□□□ -1.33
CUL3-212ENST00000497715 MTMR7Q9Y216 660 aa6.76□□□□□ -1.33
CUL3-212ENST00000497715 IRF6O14896 467 aa6.75□□□□□ -1.33
CUL3-212ENST00000497715 NEFMP07197 916 aa6.75□□□□□ -1.33
CUL3-212ENST00000497715 ITGAEP38570 1179 aa6.75□□□□□ -1.33
CUL3-212ENST00000497715 FOXD4L6Q3SYB3 417 aaPredicted RBP6.75□□□□□ -1.33
CUL3-212ENST00000497715 FOXD4L3Q6VB84 417 aaPredicted RBP6.75□□□□□ -1.33
CUL3-212ENST00000497715 MIER1Q8N108 512 aa6.75□□□□□ -1.33
CUL3-212ENST00000497715 SGSM3Q96HU1 749 aa6.75□□□□□ -1.33
CUL3-212ENST00000497715 CCDC180Q9P1Z9 1646 aa6.74□□□□□ -1.33
CUL3-212ENST00000497715 WASHC2CQ9Y4E1 1318 aa6.74□□□□□ -1.33
CUL3-212ENST00000497715 FAM43AQ8N2R8 423 aa6.74□□□□□ -1.33
CUL3-212ENST00000497715 PHF14O94880 888 aa6.74□□□□□ -1.33
CUL3-212ENST00000497715 SEMA3FQ13275 785 aa6.74□□□□□ -1.33
CUL3-212ENST00000497715 NOP58Q9Y2X3 529 aaKnown RBP6.74□□□□□ -1.33
CUL3-212ENST00000497715 PRR29P0C7W0 189 aa6.73□□□□□ -1.33
CUL3-212ENST00000497715 TMTC2Q8N394 836 aa6.73□□□□□ -1.33
CUL3-212ENST00000497715 PLEKHD1A6NEE1 506 aa6.72□□□□□ -1.33
CUL3-212ENST00000497715 CHRDL2Q6WN34 429 aa6.72□□□□□ -1.33
CUL3-212ENST00000497715 POTEMA6NI47 508 aa6.72□□□□□ -1.33
CUL3-212ENST00000497715 RAD21O60216 631 aa6.72□□□□□ -1.33
CUL3-212ENST00000497715 SETQ01105 290 aaPredicted RBP6.72□□□□□ -1.33
CUL3-212ENST00000497715 ZBTB7CA1YPR0 619 aa6.71□□□□□ -1.33
CUL3-212ENST00000497715 ARID3CA6NKF2 412 aa6.71□□□□□ -1.33
CUL3-212ENST00000497715 MAFGO15525 162 aa6.71□□□□□ -1.33
CUL3-212ENST00000497715 LAS1LQ9Y4W2 734 aaKnown RBP6.71□□□□□ -1.33
CUL3-212ENST00000497715 WASHC2AQ641Q2 1341 aa6.7□□□□□ -1.34
CUL3-212ENST00000497715 EP400NLQ6ZTU2 488 aa6.7□□□□□ -1.34
CUL3-212ENST00000497715 AEBP1Q8IUX7 1158 aa6.7□□□□□ -1.34
CUL3-212ENST00000497715 TRIM41Q8WV44 630 aa6.7□□□□□ -1.34
CUL3-212ENST00000497715 CENPJQ9HC77 1338 aaPredicted RBP6.69□□□□□ -1.34
CUL3-212ENST00000497715 VGFO15240 615 aaPredicted RBP6.69□□□□□ -1.34
CUL3-212ENST00000497715 FKBP8Q14318 412 aa6.69□□□□□ -1.34
CUL3-212ENST00000497715 EGFL6Q8IUX8 553 aa6.69□□□□□ -1.34
CUL3-212ENST00000497715 KCTD17Q8N5Z5 321 aa6.69□□□□□ -1.34
CUL3-212ENST00000497715 PPP4R3BQ5MIZ7 849 aa6.68□□□□□ -1.34
CUL3-212ENST00000497715 CCER1Q8TC90 406 aaPredicted RBP6.68□□□□□ -1.34
CUL3-212ENST00000497715 DDRGK1Q96HY6 314 aa6.68□□□□□ -1.34
CUL3-212ENST00000497715 CARD10Q9BWT7 1032 aa6.68□□□□□ -1.34
CUL3-212ENST00000497715 ZBTB9Q96C00 473 aa6.67□□□□□ -1.34
CUL3-212ENST00000497715 ZNF316A6NFI3 1004 aaPredicted RBP6.67□□□□□ -1.34
CUL3-212ENST00000497715 NPM3O75607 178 aaKnown RBP6.67□□□□□ -1.34
CUL3-212ENST00000497715 DNAJC14Q6Y2X3 702 aaPredicted RBP6.67□□□□□ -1.34
CUL3-212ENST00000497715 RRAGDQ9NQL2 400 aaPredicted RBP6.66□□□□□ -1.34
CUL3-212ENST00000497715 ANP32BQ92688 251 aaKnown RBP6.66□□□□□ -1.34
CUL3-212ENST00000497715 PDCL3Q9H2J4 239 aa6.66□□□□□ -1.34
CUL3-212ENST00000497715 STK26Q9P289 416 aa6.66□□□□□ -1.34
CUL3-212ENST00000497715 CC2D1BQ5T0F9 858 aaKnown RBP6.65□□□□□ -1.34
CUL3-212ENST00000497715 AXDND1Q5T1B0 1012 aaPredicted RBP6.65□□□□□ -1.34
CUL3-212ENST00000497715 BRD1O95696 1058 aa6.64□□□□□ -1.35
CUL3-212ENST00000497715 DNTTIP2Q5QJE6 756 aaKnown RBP6.64□□□□□ -1.35
CUL3-212ENST00000497715 DCAF1Q9Y4B6 1507 aa6.64□□□□□ -1.35
CUL3-212ENST00000497715 ABCB7O75027 752 aa6.64□□□□□ -1.35
CUL3-212ENST00000497715 POTEGQ6S5H5 508 aa6.63□□□□□ -1.35
CUL3-212ENST00000497715 ARMCX6Q7L4S7 300 aa6.62□□□□□ -1.35
CUL3-212ENST00000497715 ZNF219Q9P2Y4 722 aaPredicted RBP6.62□□□□□ -1.35
CUL3-212ENST00000497715 LOC102724159A0A0B4J2E5 919 aa6.61□□□□□ -1.35
CUL3-212ENST00000497715 PWP2Q15269 919 aaKnown RBP6.61□□□□□ -1.35
CUL3-212ENST00000497715 ZBTB12Q9Y330 459 aaPredicted RBP6.61□□□□□ -1.35
CUL3-212ENST00000497715 SMAP1Q8IYB5 467 aaPredicted RBP6.61□□□□□ -1.35
CUL3-212ENST00000497715 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.61□□□□□ -1.35
CUL3-212ENST00000497715 ZNF500O60304 480 aaPredicted RBP6.6□□□□□ -1.35
CUL3-212ENST00000497715 POLD1P28340 1107 aa6.59□□□□□ -1.35
CUL3-212ENST00000497715 NBPF20Q3BBV1 942 aa6.59□□□□□ -1.35
CUL3-212ENST00000497715 ZNF513Q8N8E2 541 aaPredicted RBP6.59□□□□□ -1.35
CUL3-212ENST00000497715 MLECQ14165 292 aa6.59□□□□□ -1.35
CUL3-212ENST00000497715 CCDC96Q2M329 555 aa6.59□□□□□ -1.35
CUL3-212ENST00000497715 NBPF1Q3BBV0 1214 aa6.59□□□□□ -1.35
CUL3-212ENST00000497715 HSP90AB4PQ58FF6 505 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms