RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 SNPHO15079 494 aa15.2■□□□□ 0.02
VPS45-210ENST00000497638 ECM2O94769 699 aaPredicted RBP15.19■□□□□ 0.02
VPS45-210ENST00000497638 TAOK2Q9UL54 1235 aa15.19■□□□□ 0.02
VPS45-210ENST00000497638 BOLA1Q9Y3E2 137 aa15.19■□□□□ 0.02
VPS45-210ENST00000497638 ST18O60284 1047 aa15.18■□□□□ 0.02
VPS45-210ENST00000497638 KIF21AQ7Z4S6 1674 aa15.17■□□□□ 0.02
VPS45-210ENST00000497638 PCDH10Q9P2E7 1040 aa15.17■□□□□ 0.02
VPS45-210ENST00000497638 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
VPS45-210ENST00000497638 PEG3Q9GZU2 1588 aa15.16■□□□□ 0.02
VPS45-210ENST00000497638 BAZ1AQ9NRL2 1556 aaPredicted RBP15.16■□□□□ 0.02
VPS45-210ENST00000497638 SOX12O15370 315 aa15.12■□□□□ 0.01
VPS45-210ENST00000497638 BCL11BQ9C0K0 894 aaPredicted RBP15.09■□□□□ 0.01
VPS45-210ENST00000497638 STK24Q9Y6E0 443 aa15.08■□□□□ 0
VPS45-210ENST00000497638 PKD2Q13563 968 aa15.07■□□□□ 0
VPS45-210ENST00000497638 MRC2Q9UBG0 1479 aa15.07■□□□□ 0
VPS45-210ENST00000497638 PHF8Q9UPP1 1060 aa15.06■□□□□ 0
VPS45-210ENST00000497638 WDR62O43379 1518 aa15.04■□□□□ -0
VPS45-210ENST00000497638 STK25O00506 426 aa15.04■□□□□ -0
VPS45-210ENST00000497638 TMEM121BQ9BXQ6 578 aaPredicted RBP15.04■□□□□ -0
VPS45-210ENST00000497638 CADPSQ9ULU8 1353 aa15.01□□□□□ -0.01
VPS45-210ENST00000497638 RGL2O15211 777 aa15.01□□□□□ -0.01
VPS45-210ENST00000497638 CDAN1Q8IWY9 1227 aa15.01□□□□□ -0.01
VPS45-210ENST00000497638 NLRP6P59044 892 aa14.99□□□□□ -0.01
VPS45-210ENST00000497638 MS4A4AQ96JQ5 239 aa14.99□□□□□ -0.01
VPS45-210ENST00000497638 MICALL2Q8IY33 904 aa14.98□□□□□ -0.01
VPS45-210ENST00000497638 MARVELD3Q96A59 401 aa14.98□□□□□ -0.01
VPS45-210ENST00000497638 MROH2BQ7Z745 1585 aa14.97□□□□□ -0.01
VPS45-210ENST00000497638 CEP164Q9UPV0 1460 aa14.92□□□□□ -0.02
VPS45-210ENST00000497638 EMP3P54852 163 aa14.9□□□□□ -0.02
VPS45-210ENST00000497638 ZNF710Q8N1W2 664 aa14.89□□□□□ -0.03
VPS45-210ENST00000497638 FBXO22Q8NEZ5 403 aa14.89□□□□□ -0.03
VPS45-210ENST00000497638 MFRPQ9BY79 579 aa14.89□□□□□ -0.03
VPS45-210ENST00000497638 DOK7Q18PE1 504 aa14.87□□□□□ -0.03
VPS45-210ENST00000497638 HOXB3P14651 431 aaPredicted RBP14.86□□□□□ -0.03
VPS45-210ENST00000497638 FANCD2Q9BXW9 1451 aa14.85□□□□□ -0.03
VPS45-210ENST00000497638 TMEM92Q6UXU6 159 aa14.85□□□□□ -0.03
VPS45-210ENST00000497638 FAM205CA6NFA0 338 aa14.81□□□□□ -0.04
VPS45-210ENST00000497638 RIMBP2O15034 1052 aa14.81□□□□□ -0.04
VPS45-210ENST00000497638 RIMBP3CA6NJZ7 1639 aa14.8□□□□□ -0.04
VPS45-210ENST00000497638 RIMBP3BA6NNM3 1639 aa14.8□□□□□ -0.04
VPS45-210ENST00000497638 RIMBP3Q9UFD9 1639 aa14.8□□□□□ -0.04
VPS45-210ENST00000497638 HS3ST6Q96QI5 342 aa14.77□□□□□ -0.05
VPS45-210ENST00000497638 CFTRP13569 1480 aa14.76□□□□□ -0.05
VPS45-210ENST00000497638 WIZO95785 1651 aa14.75□□□□□ -0.05
VPS45-210ENST00000497638 HOXB1P14653 301 aaPredicted RBP14.75□□□□□ -0.05
VPS45-210ENST00000497638 URB2Q14146 1524 aaKnown RBP14.74□□□□□ -0.05
VPS45-210ENST00000497638 ARHGEF11O15085 1522 aa14.72□□□□□ -0.05
VPS45-210ENST00000497638 POTEB3A0JP26 581 aa14.7□□□□□ -0.06
VPS45-210ENST00000497638 POTEBQ6S5H4 581 aa14.7□□□□□ -0.06
VPS45-210ENST00000497638 ERBB3P21860 1342 aa14.69□□□□□ -0.06
VPS45-210ENST00000497638 CHGAP10645 457 aaKnown RBP14.69□□□□□ -0.06
VPS45-210ENST00000497638 HS6ST3Q8IZP7 471 aa14.68□□□□□ -0.06
VPS45-210ENST00000497638 ZSWIM6Q9HCJ5 1215 aa14.68□□□□□ -0.06
VPS45-210ENST00000497638 IFT140Q96RY7 1462 aa14.64□□□□□ -0.07
VPS45-210ENST00000497638 C2orf72A6NCS6 295 aa14.64□□□□□ -0.07
VPS45-210ENST00000497638 PPP1R37O75864 691 aa14.64□□□□□ -0.07
VPS45-210ENST00000497638 TMC2Q8TDI7 906 aa14.62□□□□□ -0.07
VPS45-210ENST00000497638 GPR153Q6NV75 609 aa14.61□□□□□ -0.07
VPS45-210ENST00000497638 SPNS2Q8IVW8 549 aa14.61□□□□□ -0.07
VPS45-210ENST00000497638 ZNF608Q9ULD9 1512 aaPredicted RBP14.61□□□□□ -0.07
VPS45-210ENST00000497638 KIF3CO14782 793 aa14.6□□□□□ -0.07
VPS45-210ENST00000497638 ARSIQ5FYB1 569 aa14.6□□□□□ -0.07
VPS45-210ENST00000497638 PRDM2Q13029 1718 aa14.59□□□□□ -0.07
VPS45-210ENST00000497638 VARS2Q5ST30 1063 aaKnown RBP14.59□□□□□ -0.07
VPS45-210ENST00000497638 TOP2AP11388 1531 aaKnown RBP14.59□□□□□ -0.07
VPS45-210ENST00000497638 CYB5RLQ6IPT4 315 aa14.58□□□□□ -0.08
VPS45-210ENST00000497638 KRTAP3-3Q9BYR6 98 aa14.58□□□□□ -0.08
VPS45-210ENST00000497638 KRTAP3-2Q9BYR7 98 aa14.58□□□□□ -0.08
VPS45-210ENST00000497638 MMRN1Q13201 1228 aa14.55□□□□□ -0.08
VPS45-210ENST00000497638 ARAP1Q96P48 1450 aa14.54□□□□□ -0.08
VPS45-210ENST00000497638 EIF4G3O43432 1585 aaKnown RBP14.54□□□□□ -0.08
VPS45-210ENST00000497638 KHSRPQ92945 711 aaKnown RBP eCLIP14.53□□□□□ -0.082e-6■■■■□ 23
VPS45-210ENST00000497638 RSF1Q96T23 1441 aaPredicted RBP14.52□□□□□ -0.08
VPS45-210ENST00000497638 TOPBP1Q92547 1522 aa14.51□□□□□ -0.09
VPS45-210ENST00000497638 ABCC8Q09428 1581 aa14.5□□□□□ -0.09
VPS45-210ENST00000497638 CHD1O14646 1710 aa14.49□□□□□ -0.09
VPS45-210ENST00000497638 NKX1-1Q15270 411 aaPredicted RBP14.47□□□□□ -0.09
VPS45-210ENST00000497638 ZNF687Q8N1G0 1237 aa14.47□□□□□ -0.09
VPS45-210ENST00000497638 RYDENQ9NUL5 291 aaKnown RBP14.47□□□□□ -0.09
VPS45-210ENST00000497638 ZNF316A6NFI3 1004 aaPredicted RBP14.45□□□□□ -0.1
VPS45-210ENST00000497638 NUDT7P0C024 238 aa14.45□□□□□ -0.1
VPS45-210ENST00000497638 DNMBPQ6XZF7 1577 aa14.44□□□□□ -0.1
VPS45-210ENST00000497638 PCDHGA4Q9Y5G9 962 aa14.44□□□□□ -0.1
VPS45-210ENST00000497638 SLC34A2O95436 690 aa14.43□□□□□ -0.1
VPS45-210ENST00000497638 TARBP1Q13395 1621 aaKnown RBP14.42□□□□□ -0.1
VPS45-210ENST00000497638 AQRO60306 1485 aaKnown RBP eCLIP14.42□□□□□ -0.17e-8■■■■□ 21.3
VPS45-210ENST00000497638 GPHNQ9NQX3 736 aaPredicted RBP14.4□□□□□ -0.1
VPS45-210ENST00000497638 CCDC88BA6NC98 1476 aa14.39□□□□□ -0.11
VPS45-210ENST00000497638 FOXK1P85037 733 aa14.38□□□□□ -0.11
VPS45-210ENST00000497638 PLPP6Q8IY26 295 aa14.38□□□□□ -0.11
VPS45-210ENST00000497638 LHX6Q9UPM6 363 aa14.36□□□□□ -0.11
VPS45-210ENST00000497638 CLASP1Q7Z460 1538 aa14.35□□□□□ -0.11
VPS45-210ENST00000497638 POLA1P09884 1462 aaPredicted RBP14.34□□□□□ -0.11
VPS45-210ENST00000497638 DSG2Q14126 1118 aa14.34□□□□□ -0.11
VPS45-210ENST00000497638 PTCD2Q8WV60 388 aaKnown RBP14.31□□□□□ -0.12
VPS45-210ENST00000497638 SYNJ1O43426 1573 aa14.3□□□□□ -0.12
VPS45-210ENST00000497638 WDR97A6NE52 1622 aa14.3□□□□□ -0.12
VPS45-210ENST00000497638 ANKRD13DQ6ZTN6 518 aa14.3□□□□□ -0.12
VPS45-210ENST00000497638 TBC1D12O60347 775 aa14.29□□□□□ -0.12
VPS45-210ENST00000497638 SNAPC4Q5SXM2 1469 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms