RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 G3V3G9 751 aa11.62□□□□□ -0.55
SSR3-208ENST00000496050 ASTLQ6HA08 431 aaPredicted RBP11.62□□□□□ -0.55
SSR3-208ENST00000496050 MICALL2Q8IY33 904 aa11.62□□□□□ -0.55
SSR3-208ENST00000496050 TMC2Q8TDI7 906 aa11.61□□□□□ -0.55
SSR3-208ENST00000496050 IRX5P78411 483 aaPredicted RBP11.6□□□□□ -0.55
SSR3-208ENST00000496050 PDCD7Q8N8D1 485 aaKnown RBP11.6□□□□□ -0.55
SSR3-208ENST00000496050 BOLA1Q9Y3E2 137 aa11.58□□□□□ -0.56
SSR3-208ENST00000496050 PLCG2P16885 1265 aa11.57□□□□□ -0.56
SSR3-208ENST00000496050 L3MBTL3Q96JM7 780 aaPredicted RBP11.56□□□□□ -0.56
SSR3-208ENST00000496050 TMEM121BQ9BXQ6 578 aaPredicted RBP11.56□□□□□ -0.56
SSR3-208ENST00000496050 GABBR2O75899 941 aa11.55□□□□□ -0.56
SSR3-208ENST00000496050 FOXK1P85037 733 aa11.55□□□□□ -0.56
SSR3-208ENST00000496050 DSG2Q14126 1118 aa11.55□□□□□ -0.56
SSR3-208ENST00000496050 ZC3H15Q8WU90 426 aaKnown RBP11.55□□□□□ -0.56
SSR3-208ENST00000496050 DCBLD2Q96PD2 775 aa11.53□□□□□ -0.56
SSR3-208ENST00000496050 SPDYE16A6NNV3 312 aaPredicted RBP11.52□□□□□ -0.57
SSR3-208ENST00000496050 SEC24BO95487 1268 aa11.52□□□□□ -0.57
SSR3-208ENST00000496050 PLPP6Q8IY26 295 aa11.5□□□□□ -0.57
SSR3-208ENST00000496050 C2orf72A6NCS6 295 aa11.49□□□□□ -0.57
SSR3-208ENST00000496050 EMILIN3Q9NT22 766 aa11.49□□□□□ -0.57
SSR3-208ENST00000496050 DPYSL4O14531 572 aa11.48□□□□□ -0.57
SSR3-208ENST00000496050 KIF3CO14782 793 aa11.46□□□□□ -0.57
SSR3-208ENST00000496050 SLC39A7Q92504 469 aa11.45□□□□□ -0.58
SSR3-208ENST00000496050 ZMYND10O75800 440 aa11.44□□□□□ -0.58
SSR3-208ENST00000496050 C7P10643 843 aa11.44□□□□□ -0.58
SSR3-208ENST00000496050 MLLT3P42568 568 aaPredicted RBP11.44□□□□□ -0.58
SSR3-208ENST00000496050 MAP3K9P80192 1104 aa11.44□□□□□ -0.58
SSR3-208ENST00000496050 PDIA6Q15084 440 aa11.44□□□□□ -0.58
SSR3-208ENST00000496050 PELP1Q8IZL8 1130 aaKnown RBP11.43□□□□□ -0.58
SSR3-208ENST00000496050 TMEM132AQ24JP5 1023 aa11.42□□□□□ -0.58
SSR3-208ENST00000496050 SLC24A3Q9HC58 644 aa11.41□□□□□ -0.58
SSR3-208ENST00000496050 COLQQ9Y215 455 aaPredicted RBP11.41□□□□□ -0.58
SSR3-208ENST00000496050 RBM26Q5T8P6 1007 aaKnown RBP11.4□□□□□ -0.58
SSR3-208ENST00000496050 BARGINQ6ZT62 677 aa11.4□□□□□ -0.58
SSR3-208ENST00000496050 POTEHQ6S545 545 aa11.39□□□□□ -0.59
SSR3-208ENST00000496050 GPIHBP1Q8IV16 184 aa11.39□□□□□ -0.59
SSR3-208ENST00000496050 TBC1D12O60347 775 aa11.37□□□□□ -0.59
SSR3-208ENST00000496050 KRI1Q8N9T8 703 aaKnown RBP11.37□□□□□ -0.59
SSR3-208ENST00000496050 TMEM92Q6UXU6 159 aa11.35□□□□□ -0.59
SSR3-208ENST00000496050 BRPF1P55201 1214 aaPredicted RBP11.34□□□□□ -0.59
SSR3-208ENST00000496050 UPF1Q92900 1129 aaKnown RBP eCLIP11.34□□□□□ -0.59
SSR3-208ENST00000496050 NEUROD2Q15784 382 aa11.33□□□□□ -0.6
SSR3-208ENST00000496050 OXER1Q8TDS5 423 aa11.33□□□□□ -0.6
SSR3-208ENST00000496050 AK7Q96M32 723 aa11.33□□□□□ -0.6
SSR3-208ENST00000496050 METRNQ9UJH8 293 aa11.33□□□□□ -0.6
SSR3-208ENST00000496050 GTF3C3Q9Y5Q9 886 aa11.33□□□□□ -0.6
SSR3-208ENST00000496050 GRXCR2A6NFK2 248 aa11.32□□□□□ -0.6
SSR3-208ENST00000496050 C3orf67Q6ZVT6 689 aa11.32□□□□□ -0.6
SSR3-208ENST00000496050 POTEFA5A3E0 1075 aa11.31□□□□□ -0.6
SSR3-208ENST00000496050 PTGER2P43116 358 aa11.3□□□□□ -0.6
SSR3-208ENST00000496050 NUTM2FA1L443 756 aa11.26□□□□□ -0.61
SSR3-208ENST00000496050 ZNF316A6NFI3 1004 aaPredicted RBP11.26□□□□□ -0.61
SSR3-208ENST00000496050 POTEIP0CG38 1075 aa11.26□□□□□ -0.61
SSR3-208ENST00000496050 EVI5O60447 810 aa11.25□□□□□ -0.61
SSR3-208ENST00000496050 PTCD2Q8WV60 388 aaKnown RBP11.25□□□□□ -0.61
SSR3-208ENST00000496050 OSBPP22059 807 aa11.24□□□□□ -0.61
SSR3-208ENST00000496050 ERICH6Q7L0X2 663 aa11.24□□□□□ -0.61
SSR3-208ENST00000496050 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.24□□□□□ -0.61
SSR3-208ENST00000496050 SLC34A2O95436 690 aa11.23□□□□□ -0.61
SSR3-208ENST00000496050 SP7Q8TDD2 431 aaPredicted RBP11.23□□□□□ -0.61
SSR3-208ENST00000496050 DDX12PQ92771 950 aa11.23□□□□□ -0.61
SSR3-208ENST00000496050 DAXXQ9UER7 740 aaPredicted RBP11.22□□□□□ -0.61
SSR3-208ENST00000496050 MINK1Q8N4C8 1332 aaPredicted RBP11.2□□□□□ -0.62
SSR3-208ENST00000496050 ANO8Q9HCE9 1232 aaPredicted RBP11.2□□□□□ -0.62
SSR3-208ENST00000496050 TRIM66O15016 1216 aa11.18□□□□□ -0.62
SSR3-208ENST00000496050 FCHSD2O94868 740 aa11.18□□□□□ -0.62
SSR3-208ENST00000496050 GPR37O15354 613 aa11.17□□□□□ -0.62
SSR3-208ENST00000496050 GNPATO15228 680 aa11.16□□□□□ -0.62
SSR3-208ENST00000496050 HIC1Q14526 733 aa11.16□□□□□ -0.62
SSR3-208ENST00000496050 PDE4DQ08499 809 aa11.14□□□□□ -0.63
SSR3-208ENST00000496050 MAP2K5Q13163 448 aa11.14□□□□□ -0.63
SSR3-208ENST00000496050 EPAS1Q99814 870 aa11.14□□□□□ -0.63
SSR3-208ENST00000496050 IRF6O14896 467 aa11.13□□□□□ -0.63
SSR3-208ENST00000496050 PHF14O94880 888 aa11.12□□□□□ -0.63
SSR3-208ENST00000496050 GPBP1L1Q9HC44 474 aaPredicted RBP11.11□□□□□ -0.63
SSR3-208ENST00000496050 PCDHGA4Q9Y5G9 962 aa11.11□□□□□ -0.63
SSR3-208ENST00000496050 KDM4CQ9H3R0 1056 aa11.1□□□□□ -0.63
SSR3-208ENST00000496050 PTGDRQ13258 359 aa11.09□□□□□ -0.63
SSR3-208ENST00000496050 TIMELESSQ9UNS1 1208 aa11.09□□□□□ -0.63
SSR3-208ENST00000496050 PRIM1P49642 420 aaKnown RBP11.07□□□□□ -0.64
SSR3-208ENST00000496050 SLAIN1Q8ND83 568 aa11.07□□□□□ -0.64
SSR3-208ENST00000496050 IL27Q8NEV9 243 aa11.07□□□□□ -0.64
SSR3-208ENST00000496050 CCDC102AQ96A19 550 aa11.07□□□□□ -0.64
SSR3-208ENST00000496050 MAP3K7O43318 606 aa11.06□□□□□ -0.64
SSR3-208ENST00000496050 FECHP22830 423 aa11.05□□□□□ -0.64
SSR3-208ENST00000496050 EN1Q05925 392 aaPredicted RBP11.05□□□□□ -0.64
SSR3-208ENST00000496050 TYW1BQ6NUM6 668 aa11.05□□□□□ -0.64
SSR3-208ENST00000496050 PCDHGA10Q9Y5H3 936 aa11.05□□□□□ -0.64
SSR3-208ENST00000496050 AMHR2Q16671 573 aa11.04□□□□□ -0.64
SSR3-208ENST00000496050 FBXW7Q969H0 707 aa11.04□□□□□ -0.64
SSR3-208ENST00000496050 DOK7Q18PE1 504 aa11.03□□□□□ -0.64
SSR3-208ENST00000496050 RBM33Q96EV2 1170 aaKnown RBP11.03□□□□□ -0.64
SSR3-208ENST00000496050 RIMBP2O15034 1052 aa11.01□□□□□ -0.65
SSR3-208ENST00000496050 C14orf37Q86TY3 774 aa11.01□□□□□ -0.65
SSR3-208ENST00000496050 NPDC1Q9NQX5 325 aaPredicted RBP11.01□□□□□ -0.65
SSR3-208ENST00000496050 KDM4FA0A1W2PPD8 638 aa11□□□□□ -0.65
SSR3-208ENST00000496050 JPH4Q96JJ6 628 aa11□□□□□ -0.65
SSR3-208ENST00000496050 MAMSTRQ6ZN01 415 aa10.99□□□□□ -0.65
SSR3-208ENST00000496050 FOSBP53539 338 aa10.98□□□□□ -0.65
SSR3-208ENST00000496050 CERKQ8TCT0 537 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms