RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ZEB1P37275 1124 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-220ENST00000492859 IFNLR1Q8IU57 520 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-220ENST00000492859 CERS3Q8IU89 383 aa6.14□□□□□ -1.43
BRCA1-220ENST00000492859 CWC22Q9HCG8 908 aaKnown RBP6.14□□□□□ -1.43
BRCA1-220ENST00000492859 PAK3O75914 559 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-220ENST00000492859 NEUROD2Q15784 382 aa6.13□□□□□ -1.43
BRCA1-220ENST00000492859 TMED8Q6PL24 325 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-220ENST00000492859 PSMD1Q99460 953 aa6.13□□□□□ -1.43
BRCA1-220ENST00000492859 USP35Q9P2H5 1018 aa6.12□□□□□ -1.43
BRCA1-220ENST00000492859 A0A0U1RQG5 324 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-220ENST00000492859 AAMPQ13685 434 aa6.11□□□□□ -1.43
BRCA1-220ENST00000492859 CC2D2BQ6DHV5 1058 aa6.11□□□□□ -1.43
BRCA1-220ENST00000492859 KIF12Q96FN5 646 aa6.11□□□□□ -1.43
BRCA1-220ENST00000492859 NAP1L5Q96NT1 182 aaPredicted RBP6.11□□□□□ -1.43
BRCA1-220ENST00000492859 APBB1O00213 710 aa6.1□□□□□ -1.43
BRCA1-220ENST00000492859 MAP3K13O43283 966 aa6.1□□□□□ -1.43
BRCA1-220ENST00000492859 ANO8Q9HCE9 1232 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-220ENST00000492859 CENPBP07199 599 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-220ENST00000492859 DCBLD2Q96PD2 775 aa6.09□□□□□ -1.43
BRCA1-220ENST00000492859 MFAP1P55081 439 aaKnown RBP6.07□□□□□ -1.44
BRCA1-220ENST00000492859 ARID4BQ4LE39 1312 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-220ENST00000492859 E9PSI1 815 aa6.06□□□□□ -1.44
BRCA1-220ENST00000492859 TMCO4Q5TGY1 634 aa6.06□□□□□ -1.44
BRCA1-220ENST00000492859 PRDM16Q9HAZ2 1276 aa6.06□□□□□ -1.44
BRCA1-220ENST00000492859 PPM1GO15355 546 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-220ENST00000492859 PYGBP11216 843 aa6.06□□□□□ -1.44
BRCA1-220ENST00000492859 DCAF8Q5TAQ9 597 aa6.06□□□□□ -1.44
BRCA1-220ENST00000492859 POTEB2H3BUK9 544 aa6.05□□□□□ -1.44
BRCA1-220ENST00000492859 TRAIPQ9BWF2 469 aa6.05□□□□□ -1.44
BRCA1-220ENST00000492859 ZBTB47Q9UFB7 747 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-220ENST00000492859 ATMINO43313 823 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-220ENST00000492859 LMOD2Q6P5Q4 547 aa6.04□□□□□ -1.44
BRCA1-220ENST00000492859 AEBP1Q8IUX7 1158 aa6.04□□□□□ -1.44
BRCA1-220ENST00000492859 ATN1P54259 1190 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-220ENST00000492859 IFNL1Q8IU54 200 aa6.03□□□□□ -1.44
BRCA1-220ENST00000492859 FAM212AQ96EL1 285 aa6.03□□□□□ -1.44
BRCA1-220ENST00000492859 BMP2KQ9NSY1 1161 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-220ENST00000492859 ECM2O94769 699 aaPredicted RBP6.02□□□□□ -1.45
BRCA1-220ENST00000492859 NCLP19338 710 aaKnown RBP6.02□□□□□ -1.45
BRCA1-220ENST00000492859 CLCN6P51797 869 aa6.02□□□□□ -1.45
BRCA1-220ENST00000492859 CCDC27Q2M243 656 aa6.02□□□□□ -1.45
BRCA1-220ENST00000492859 PCDHB13Q9Y5F0 798 aa6.02□□□□□ -1.45
BRCA1-220ENST00000492859 ASTLQ6HA08 431 aaPredicted RBP6.01□□□□□ -1.45
BRCA1-220ENST00000492859 TEX2Q8IWB9 1127 aa6.01□□□□□ -1.45
BRCA1-220ENST00000492859 PCDHB8Q9UN66 801 aa6.01□□□□□ -1.45
BRCA1-220ENST00000492859 ZNF526Q8TF50 670 aaPredicted RBP6.01□□□□□ -1.45
BRCA1-220ENST00000492859 GZF1Q9H116 711 aaPredicted RBP6.01□□□□□ -1.45
BRCA1-220ENST00000492859 RGL2O15211 777 aa6□□□□□ -1.45
BRCA1-220ENST00000492859 CCDC125Q86Z20 511 aa6□□□□□ -1.45
BRCA1-220ENST00000492859 CCDC82Q8N4S0 544 aa6□□□□□ -1.45
BRCA1-220ENST00000492859 POTEFA5A3E0 1075 aa5.99□□□□□ -1.45
BRCA1-220ENST00000492859 TTLL13PA6NNM8 815 aa5.99□□□□□ -1.45
BRCA1-220ENST00000492859 POTEJP0CG39 1038 aa5.99□□□□□ -1.45
BRCA1-220ENST00000492859 PRDM10Q9NQV6 1147 aa5.99□□□□□ -1.45
BRCA1-220ENST00000492859 SPOCK2Q92563 424 aa5.98□□□□□ -1.45
BRCA1-220ENST00000492859 OTUD5Q96G74 571 aa5.97□□□□□ -1.45
BRCA1-220ENST00000492859 PLCD4Q9BRC7 762 aa5.97□□□□□ -1.45
BRCA1-220ENST00000492859 SLC24A3Q9HC58 644 aa5.97□□□□□ -1.45
BRCA1-220ENST00000492859 CIZ1Q9ULV3 898 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-220ENST00000492859 CLSPNQ9HAW4 1339 aa5.97□□□□□ -1.45
BRCA1-220ENST00000492859 KDM4AO75164 1064 aa5.97□□□□□ -1.45
BRCA1-220ENST00000492859 RBM10P98175 930 aaKnown RBP5.97□□□□□ -1.45
BRCA1-220ENST00000492859 METRNQ9UJH8 293 aa5.97□□□□□ -1.45
BRCA1-220ENST00000492859 CADPSQ9ULU8 1353 aa5.96□□□□□ -1.46
BRCA1-220ENST00000492859 SETQ01105 290 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-220ENST00000492859 CNPY4Q8N129 248 aa5.96□□□□□ -1.46
BRCA1-220ENST00000492859 ZNF316A6NFI3 1004 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-220ENST00000492859 CHGAP10645 457 aaKnown RBP5.95□□□□□ -1.46
BRCA1-220ENST00000492859 TIE1P35590 1138 aa5.95□□□□□ -1.46
BRCA1-220ENST00000492859 COLQQ9Y215 455 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-220ENST00000492859 MKRN3Q13064 507 aaKnown RBP5.94□□□□□ -1.46
BRCA1-220ENST00000492859 TMEM106CQ9BVX2 250 aa5.94□□□□□ -1.46
BRCA1-220ENST00000492859 TRIM35Q9UPQ4 493 aa5.94□□□□□ -1.46
BRCA1-220ENST00000492859 ZC3H15Q8WU90 426 aaKnown RBP5.93□□□□□ -1.46
BRCA1-220ENST00000492859 MAFGO15525 162 aa5.93□□□□□ -1.46
BRCA1-220ENST00000492859 CHRM1P11229 460 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-220ENST00000492859 GSE1Q14687 1217 aa5.93□□□□□ -1.46
BRCA1-220ENST00000492859 SGIP1Q9BQI5 828 aa5.93□□□□□ -1.46
BRCA1-220ENST00000492859 ANP32EQ9BTT0 268 aa5.93□□□□□ -1.46
BRCA1-220ENST00000492859 ANAPC15P60006 121 aa5.92□□□□□ -1.46
BRCA1-220ENST00000492859 SLC39A7Q92504 469 aa5.92□□□□□ -1.46
BRCA1-220ENST00000492859 C7P10643 843 aa5.91□□□□□ -1.46
BRCA1-220ENST00000492859 GRIPAP1Q4V328 841 aa5.91□□□□□ -1.46
BRCA1-220ENST00000492859 PTMSP20962 102 aa5.9□□□□□ -1.46
BRCA1-220ENST00000492859 LOC102724159A0A0B4J2E5 919 aa5.89□□□□□ -1.47
BRCA1-220ENST00000492859 PWP2Q15269 919 aaKnown RBP5.89□□□□□ -1.47
BRCA1-220ENST00000492859 RNF25Q96BH1 459 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-220ENST00000492859 EXOC8Q8IYI6 725 aa5.89□□□□□ -1.47
BRCA1-220ENST00000492859 IL27Q8NEV9 243 aa5.89□□□□□ -1.47
BRCA1-220ENST00000492859 IRF5Q13568 498 aa5.88□□□□□ -1.47
BRCA1-220ENST00000492859 MCCP23508 829 aa5.87□□□□□ -1.47
BRCA1-220ENST00000492859 ERICH6BQ5W0A0 696 aa5.87□□□□□ -1.47
BRCA1-220ENST00000492859 GPATCH11Q8N954 259 aa5.87□□□□□ -1.47
BRCA1-220ENST00000492859 FBXW7Q969H0 707 aa5.87□□□□□ -1.47
BRCA1-220ENST00000492859 WDR70Q9NW82 654 aa5.87□□□□□ -1.47
BRCA1-220ENST00000492859 RIPOR2Q9Y4F9 1068 aa5.87□□□□□ -1.47
BRCA1-220ENST00000492859 PSEN1P49768 467 aa5.86□□□□□ -1.47
BRCA1-220ENST00000492859 HSP90AB4PQ58FF6 505 aa5.86□□□□□ -1.47
BRCA1-220ENST00000492859 BARGINQ6ZT62 677 aa5.86□□□□□ -1.47
BRCA1-220ENST00000492859 DNAJC2Q99543 621 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms