RNA–Protein interactions for RNA: ENST00000489707.5

PTK7-216, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-216ENST00000489707 CHIC2Q9UKJ5 165 aa22.23■■□□□ 1.15
PTK7-216ENST00000489707 ADGBQ8N7X0 1667 aa22.23■■□□□ 1.15
PTK7-216ENST00000489707 ABCC5O15440 1437 aa22.21■■□□□ 1.15
PTK7-216ENST00000489707 CAMSAP2Q08AD1 1489 aa22.21■■□□□ 1.15
PTK7-216ENST00000489707 GPATCH8Q9UKJ3 1502 aaKnown RBP22.19■■□□□ 1.14
PTK7-216ENST00000489707 CROCC2H7BZ55 1655 aa22.19■■□□□ 1.14
PTK7-216ENST00000489707 PLEKHD1A6NEE1 506 aa22.19■■□□□ 1.14
PTK7-216ENST00000489707 CFDP1Q9UEE9 299 aaPredicted RBP22.19■■□□□ 1.14
PTK7-216ENST00000489707 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
PTK7-216ENST00000489707 TRIM52Q96A61 297 aa22.17■■□□□ 1.14
PTK7-216ENST00000489707 KDM6BO15054 1643 aa22.16■■□□□ 1.14
PTK7-216ENST00000489707 PTPRGP23470 1445 aa22.16■■□□□ 1.14
PTK7-216ENST00000489707 ATP10BO94823 1461 aa22.16■■□□□ 1.14
PTK7-216ENST00000489707 CDC42BPAQ5VT25 1732 aa22.15■■□□□ 1.14
PTK7-216ENST00000489707 ADGRL2O95490 1459 aa22.12■■□□□ 1.13
PTK7-216ENST00000489707 ZNF644Q9H582 1327 aaPredicted RBP22.1■■□□□ 1.13
PTK7-216ENST00000489707 MPHOSPH9Q99550 1183 aa22.1■■□□□ 1.13
PTK7-216ENST00000489707 ABCC10Q5T3U5 1492 aa22.1■■□□□ 1.13
PTK7-216ENST00000489707 YTHDC1Q96MU7 727 aaKnown RBP22.08■■□□□ 1.13
PTK7-216ENST00000489707 DENND4BO75064 1496 aaPredicted RBP22.08■■□□□ 1.12
PTK7-216ENST00000489707 SHANK2Q9UPX8 1470 aa22.07■■□□□ 1.12
PTK7-216ENST00000489707 NCOA1Q15788 1441 aa22.06■■□□□ 1.12
PTK7-216ENST00000489707 ANKRD30AQ9BXX3 1397 aa22.05■■□□□ 1.12
PTK7-216ENST00000489707 KDM5BQ9UGL1 1544 aa22.02■■□□□ 1.12
PTK7-216ENST00000489707 ZNF777Q9ULD5 760 aaPredicted RBP22.02■■□□□ 1.12
PTK7-216ENST00000489707 ARHGEF5Q12774 1597 aa22.01■■□□□ 1.11
PTK7-216ENST00000489707 PREX2Q70Z35 1606 aa22■■□□□ 1.11
PTK7-216ENST00000489707 RPRD2Q5VT52 1461 aaKnown RBP21.98■■□□□ 1.11
PTK7-216ENST00000489707 ABCC2Q92887 1545 aa21.98■■□□□ 1.11
PTK7-216ENST00000489707 ANKRD30BQ9BXX2 1392 aa21.97■■□□□ 1.11
PTK7-216ENST00000489707 SLC4A1APQ9BWU0 796 aaKnown RBP21.96■■□□□ 1.11
PTK7-216ENST00000489707 GTF3C3Q9Y5Q9 886 aa21.96■■□□□ 1.11
PTK7-216ENST00000489707 CLASP1Q7Z460 1538 aa21.95■■□□□ 1.1
PTK7-216ENST00000489707 C9orf84Q5VXU9 1444 aa21.95■■□□□ 1.1
PTK7-216ENST00000489707 CDC42BPBQ9Y5S2 1711 aa21.95■■□□□ 1.1
PTK7-216ENST00000489707 TSPY4P0CV99 314 aa21.94■■□□□ 1.1
PTK7-216ENST00000489707 TSPY10P0CW01 314 aa21.94■■□□□ 1.1
PTK7-216ENST00000489707 RSPH4AQ5TD94 716 aa21.94■■□□□ 1.1
PTK7-216ENST00000489707 ANKRD50Q9ULJ7 1429 aa21.93■■□□□ 1.1
PTK7-216ENST00000489707 DDX10Q13206 875 aaKnown RBP21.92■■□□□ 1.1
PTK7-216ENST00000489707 PZPP20742 1482 aa21.92■■□□□ 1.1
PTK7-216ENST00000489707 MYO5CQ9NQX4 1742 aa21.9■■□□□ 1.1
PTK7-216ENST00000489707 CCDC141Q6ZP82 1450 aa21.89■■□□□ 1.1
PTK7-216ENST00000489707 SAMD9LQ8IVG5 1584 aa21.89■■□□□ 1.09
PTK7-216ENST00000489707 KIAA1107Q9UPP5 1409 aa21.89■■□□□ 1.09
PTK7-216ENST00000489707 UHRF1BP1LA0JNW5 1464 aa21.87■■□□□ 1.09
PTK7-216ENST00000489707 KDM5DQ9BY66 1539 aa21.87■■□□□ 1.09
PTK7-216ENST00000489707 PLEKHH2Q8IVE3 1493 aa21.86■■□□□ 1.09
PTK7-216ENST00000489707 ERCC6L2Q5T890 1561 aa21.86■■□□□ 1.09
PTK7-216ENST00000489707 TEX14Q8IWB6 1497 aa21.86■■□□□ 1.09
PTK7-216ENST00000489707 MBD5Q9P267 1494 aa21.86■■□□□ 1.09
PTK7-216ENST00000489707 L3MBTL2Q969R5 705 aa21.85■■□□□ 1.09
PTK7-216ENST00000489707 TTC37Q6PGP7 1564 aa21.84■■□□□ 1.09
PTK7-216ENST00000489707 ARHGAP5Q13017 1502 aa21.84■■□□□ 1.09
PTK7-216ENST00000489707 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.84■■□□□ 1.09
PTK7-216ENST00000489707 MAST1Q9Y2H9 1570 aa21.84■■□□□ 1.09
PTK7-216ENST00000489707 FOXD1Q16676 465 aa21.84■■□□□ 1.09
PTK7-216ENST00000489707 EIF4G2P78344 907 aaKnown RBP eCLIP21.83■■□□□ 1.09
PTK7-216ENST00000489707 ANP32CO43423 234 aa21.82■■□□□ 1.08
PTK7-216ENST00000489707 ZCCHC11Q5TAX3 1644 aaKnown RBP21.82■■□□□ 1.08
PTK7-216ENST00000489707 KIF15Q9NS87 1388 aa21.82■■□□□ 1.08
PTK7-216ENST00000489707 HIRIP3Q9BW71 556 aaPredicted RBP21.81■■□□□ 1.08
PTK7-216ENST00000489707 CCER2I3L3R5 266 aa21.8■■□□□ 1.08
PTK7-216ENST00000489707 HNRNPMP52272 730 aaKnown RBP eCLIP21.79■■□□□ 1.08
PTK7-216ENST00000489707 SYCP2Q9BX26 1530 aa21.77■■□□□ 1.08
PTK7-216ENST00000489707 NUP155O75694 1391 aa21.77■■□□□ 1.08
PTK7-216ENST00000489707 PKD2Q13563 968 aa21.76■■□□□ 1.07
PTK7-216ENST00000489707 PLXNC1O60486 1568 aa21.76■■□□□ 1.07
PTK7-216ENST00000489707 HSPA5P11021 654 aaKnown RBP21.76■■□□□ 1.07
PTK7-216ENST00000489707 POLR1AO95602 1720 aaPredicted RBP21.76■■□□□ 1.07
PTK7-216ENST00000489707 ARHGEF12Q9NZN5 1544 aa21.71■■□□□ 1.07
PTK7-216ENST00000489707 PLCH2O75038 1416 aa21.71■■□□□ 1.07
PTK7-216ENST00000489707 UNC13BO14795 1591 aa21.7■■□□□ 1.06
PTK7-216ENST00000489707 ARAP3Q8WWN8 1544 aa21.7■■□□□ 1.06
PTK7-216ENST00000489707 FAM135AQ9P2D6 1515 aa21.67■■□□□ 1.06
PTK7-216ENST00000489707 EFCAB2Q5VUJ9 269 aa21.67■■□□□ 1.06
PTK7-216ENST00000489707 DUOX2Q9NRD8 1548 aa21.66■■□□□ 1.06
PTK7-216ENST00000489707 WASHC2AQ641Q2 1341 aa21.66■■□□□ 1.06
PTK7-216ENST00000489707 NBPF8Q3BBV2 869 aa21.65■■□□□ 1.06
PTK7-216ENST00000489707 KCNH8Q96L42 1107 aa21.65■■□□□ 1.06
PTK7-216ENST00000489707 ABCC1P33527 1531 aa21.64■■□□□ 1.05
PTK7-216ENST00000489707 UHRF1BP1Q6BDS2 1440 aa21.62■■□□□ 1.05
PTK7-216ENST00000489707 SPATA31E1Q6ZUB1 1445 aa21.62■■□□□ 1.05
PTK7-216ENST00000489707 CNTLNQ9NXG0 1405 aa21.62■■□□□ 1.05
PTK7-216ENST00000489707 IQGAP3Q86VI3 1631 aa21.62■■□□□ 1.05
PTK7-216ENST00000489707 ERBINQ96RT1 1412 aa21.62■■□□□ 1.05
PTK7-216ENST00000489707 CCDC7Q96M83 1385 aa21.61■■□□□ 1.05
PTK7-216ENST00000489707 WDR7Q9Y4E6 1490 aa21.58■■□□□ 1.05
PTK7-216ENST00000489707 RALGAPBQ86X10 1494 aa21.58■■□□□ 1.04
PTK7-216ENST00000489707 MAGI2Q86UL8 1455 aa21.56■■□□□ 1.04
PTK7-216ENST00000489707 KDM5CP41229 1560 aa21.54■■□□□ 1.04
PTK7-216ENST00000489707 ARID4BQ4LE39 1312 aaPredicted RBP21.54■■□□□ 1.04
PTK7-216ENST00000489707 CCDC144AA2RUR9 1427 aa21.54■■□□□ 1.04
PTK7-216ENST00000489707 RTEL1-TNFRSF6BF6WH68 1400 aa21.54■■□□□ 1.04
PTK7-216ENST00000489707 ABCA9Q8IUA7 1624 aa21.54■■□□□ 1.04
PTK7-216ENST00000489707 USP47Q96K76 1375 aa21.53■■□□□ 1.04
PTK7-216ENST00000489707 ZNF326Q5BKZ1 582 aaKnown RBP21.49■■□□□ 1.03
PTK7-216ENST00000489707 ATP10AO60312 1499 aa21.49■■□□□ 1.03
PTK7-216ENST00000489707 KIF7Q2M1P5 1343 aa21.48■■□□□ 1.03
PTK7-216ENST00000489707 SPAG9O60271 1321 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms