RNA–Protein interactions for RNA: ENST00000489491.1

PDZD8-204, Transcript of PDZ domain containing 8, humanhuman

TSL 2

Gene PDZD8, Length 289 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-204ENST00000489491 HOXB1P14653 301 aaPredicted RBP8.73□□□□□ -1.01
PDZD8-204ENST00000489491 HS6ST3Q8IZP7 471 aa8.73□□□□□ -1.01
PDZD8-204ENST00000489491 GPR153Q6NV75 609 aa8.72□□□□□ -1.01
PDZD8-204ENST00000489491 HS3ST6Q96QI5 342 aa8.72□□□□□ -1.01
PDZD8-204ENST00000489491 KRTAP3-3Q9BYR6 98 aa8.72□□□□□ -1.01
PDZD8-204ENST00000489491 KRTAP3-2Q9BYR7 98 aa8.72□□□□□ -1.01
PDZD8-204ENST00000489491 EMP3P54852 163 aa8.71□□□□□ -1.02
PDZD8-204ENST00000489491 FAM205CA6NFA0 338 aa8.7□□□□□ -1.02
PDZD8-204ENST00000489491 C2orf72A6NCS6 295 aa8.69□□□□□ -1.02
PDZD8-204ENST00000489491 DNAJC5Q9H3Z4 198 aa8.69□□□□□ -1.02
PDZD8-204ENST00000489491 KHSRPQ92945 711 aaKnown RBP eCLIP8.68□□□□□ -1.022e-7■■■■□ 26.4
PDZD8-204ENST00000489491 DOK7Q18PE1 504 aa8.67□□□□□ -1.02
PDZD8-204ENST00000489491 CHGAP10645 457 aaKnown RBP8.66□□□□□ -1.02
PDZD8-204ENST00000489491 SPNS2Q8IVW8 549 aa8.65□□□□□ -1.02
PDZD8-204ENST00000489491 ARSIQ5FYB1 569 aa8.63□□□□□ -1.03
PDZD8-204ENST00000489491 ZNF710Q8N1W2 664 aa8.63□□□□□ -1.03
PDZD8-204ENST00000489491 ZSWIM6Q9HCJ5 1215 aa8.61□□□□□ -1.03
PDZD8-204ENST00000489491 MMRN1Q13201 1228 aa8.59□□□□□ -1.03
PDZD8-204ENST00000489491 ERBB3P21860 1342 aa8.58□□□□□ -1.04
PDZD8-204ENST00000489491 VARS2Q5ST30 1063 aaKnown RBP8.58□□□□□ -1.04
PDZD8-204ENST00000489491 KDM4FA0A1W2PPD8 638 aa8.57□□□□□ -1.04
PDZD8-204ENST00000489491 GTPBP6O43824 516 aaPredicted RBP8.57□□□□□ -1.04
PDZD8-204ENST00000489491 RIMBP2O15034 1052 aa8.56□□□□□ -1.04
PDZD8-204ENST00000489491 SLC34A2O95436 690 aa8.56□□□□□ -1.04
PDZD8-204ENST00000489491 POTEEQ6S8J3 1075 aa8.55□□□□□ -1.04
PDZD8-204ENST00000489491 DSG2Q14126 1118 aa8.54□□□□□ -1.04
PDZD8-204ENST00000489491 ZNF687Q8N1G0 1237 aa8.54□□□□□ -1.04
PDZD8-204ENST00000489491 PCDHGA4Q9Y5G9 962 aa8.54□□□□□ -1.04
PDZD8-204ENST00000489491 ZNF316A6NFI3 1004 aaPredicted RBP8.53□□□□□ -1.04
PDZD8-204ENST00000489491 NUDT7P0C024 238 aa8.53□□□□□ -1.04
PDZD8-204ENST00000489491 FOXK1P85037 733 aa8.53□□□□□ -1.04
PDZD8-204ENST00000489491 TMC2Q8TDI7 906 aa8.53□□□□□ -1.04
PDZD8-204ENST00000489491 GPHNQ9NQX3 736 aaPredicted RBP8.53□□□□□ -1.04
PDZD8-204ENST00000489491 PLPP6Q8IY26 295 aa8.51□□□□□ -1.05
PDZD8-204ENST00000489491 CRISPLD2Q9H0B8 497 aa8.51□□□□□ -1.05
PDZD8-204ENST00000489491 NCKAP5LQ9HCH0 1330 aa8.51□□□□□ -1.05
PDZD8-204ENST00000489491 LHX6Q9UPM6 363 aa8.5□□□□□ -1.05
PDZD8-204ENST00000489491 PTCD2Q8WV60 388 aaKnown RBP8.49□□□□□ -1.05
PDZD8-204ENST00000489491 CADPS2Q86UW7 1296 aa8.46□□□□□ -1.06
PDZD8-204ENST00000489491 OXER1Q8TDS5 423 aa8.43□□□□□ -1.06
PDZD8-204ENST00000489491 AXIN2Q9Y2T1 843 aa8.42□□□□□ -1.06
PDZD8-204ENST00000489491 RTN4Q9NQC3 1192 aaKnown RBP8.4□□□□□ -1.06
PDZD8-204ENST00000489491 DCAF8L2P0C7V8 631 aa8.39□□□□□ -1.07
PDZD8-204ENST00000489491 PPP1R15BQ5SWA1 713 aa8.39□□□□□ -1.07
PDZD8-204ENST00000489491 LSM11P83369 360 aaKnown RBP eCLIP8.38□□□□□ -1.07
PDZD8-204ENST00000489491 MFSD10Q14728 455 aa8.38□□□□□ -1.07
PDZD8-204ENST00000489491 RYDENQ9NUL5 291 aaKnown RBP8.38□□□□□ -1.07
PDZD8-204ENST00000489491 UPF1Q92900 1129 aaKnown RBP eCLIP8.36□□□□□ -1.07
PDZD8-204ENST00000489491 PDE4AP27815 886 aa8.35□□□□□ -1.07
PDZD8-204ENST00000489491 DMRTA1Q5VZB9 504 aa8.35□□□□□ -1.07
PDZD8-204ENST00000489491 ANKRD13DQ6ZTN6 518 aa8.35□□□□□ -1.07
PDZD8-204ENST00000489491 LARP6Q9BRS8 491 aaKnown RBP8.35□□□□□ -1.07
PDZD8-204ENST00000489491 EMILIN3Q9NT22 766 aa8.35□□□□□ -1.07
PDZD8-204ENST00000489491 PSEN2P49810 448 aa8.33□□□□□ -1.08
PDZD8-204ENST00000489491 ANO8Q9HCE9 1232 aaPredicted RBP8.33□□□□□ -1.08
PDZD8-204ENST00000489491 PBX2P40425 430 aa8.32□□□□□ -1.08
PDZD8-204ENST00000489491 MYT1LQ9UL68 1186 aa8.32□□□□□ -1.08
PDZD8-204ENST00000489491 ARHGAP33O14559 1287 aa8.31□□□□□ -1.08
PDZD8-204ENST00000489491 BBXQ8WY36 941 aaPredicted RBP8.31□□□□□ -1.08
PDZD8-204ENST00000489491 RNF166Q96A37 237 aaPredicted RBP8.31□□□□□ -1.08
PDZD8-204ENST00000489491 DDX27Q96GQ7 796 aaKnown RBP8.3□□□□□ -1.08
PDZD8-204ENST00000489491 HRO43593 1189 aa8.29□□□□□ -1.08
PDZD8-204ENST00000489491 TBC1D12O60347 775 aa8.28□□□□□ -1.08
PDZD8-204ENST00000489491 AMER1Q5JTC6 1135 aaPredicted RBP8.28□□□□□ -1.08
PDZD8-204ENST00000489491 PSDA5PKW4 1024 aaPredicted RBP8.27□□□□□ -1.09
PDZD8-204ENST00000489491 EVI5O60447 810 aa8.27□□□□□ -1.09
PDZD8-204ENST00000489491 FOSBP53539 338 aa8.27□□□□□ -1.09
PDZD8-204ENST00000489491 ADGRD1Q6QNK2 874 aa8.27□□□□□ -1.09
PDZD8-204ENST00000489491 CAMK2BQ13554 666 aa8.26□□□□□ -1.09
PDZD8-204ENST00000489491 PPP4R3BQ5MIZ7 849 aa8.25□□□□□ -1.09
PDZD8-204ENST00000489491 ZNF454Q8N9F8 522 aa8.24□□□□□ -1.09
PDZD8-204ENST00000489491 TK2O00142 265 aa8.23□□□□□ -1.09
PDZD8-204ENST00000489491 PTGER2P43116 358 aa8.23□□□□□ -1.09
PDZD8-204ENST00000489491 ADAM33Q9BZ11 813 aa8.23□□□□□ -1.09
PDZD8-204ENST00000489491 BCL2L12Q9HB09 334 aa8.23□□□□□ -1.09
PDZD8-204ENST00000489491 KCNK17Q96T54 332 aa8.22□□□□□ -1.09
PDZD8-204ENST00000489491 PCDHGA10Q9Y5H3 936 aa8.21□□□□□ -1.1
PDZD8-204ENST00000489491 JPH4Q96JJ6 628 aa8.2□□□□□ -1.1
PDZD8-204ENST00000489491 VPS9D1Q9Y2B5 631 aa8.2□□□□□ -1.1
PDZD8-204ENST00000489491 BHMG1C9JSJ3 638 aaPredicted RBP8.19□□□□□ -1.1
PDZD8-204ENST00000489491 MAP3K9P80192 1104 aa8.19□□□□□ -1.1
PDZD8-204ENST00000489491 SPRYD3Q8NCJ5 442 aa8.19□□□□□ -1.1
PDZD8-204ENST00000489491 DPYSL4O14531 572 aa8.17□□□□□ -1.1
PDZD8-204ENST00000489491 ZDHHC16Q969W1 377 aa8.17□□□□□ -1.1
PDZD8-204ENST00000489491 ZBED2Q9BTP6 218 aa8.17□□□□□ -1.1
PDZD8-204ENST00000489491 COL9A1P20849 921 aa8.16□□□□□ -1.1
PDZD8-204ENST00000489491 PAXIP1Q6ZW49 1069 aaPredicted RBP8.16□□□□□ -1.1
PDZD8-204ENST00000489491 SLC4A5Q9BY07 1137 aa8.16□□□□□ -1.1
PDZD8-204ENST00000489491 CFAP44Q96MT7 982 aa8.13□□□□□ -1.11
PDZD8-204ENST00000489491 PTPREP23469 700 aa8.12□□□□□ -1.11
PDZD8-204ENST00000489491 PRIM1P49642 420 aaKnown RBP8.12□□□□□ -1.11
PDZD8-204ENST00000489491 PHF14O94880 888 aa8.11□□□□□ -1.11
PDZD8-204ENST00000489491 PROX2Q3B8N5 592 aa8.11□□□□□ -1.11
PDZD8-204ENST00000489491 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.1□□□□□ -1.11
PDZD8-204ENST00000489491 KCTD12Q96CX2 325 aaKnown RBP8.09□□□□□ -1.11
PDZD8-204ENST00000489491 PDIA6Q15084 440 aa8.08□□□□□ -1.12
PDZD8-204ENST00000489491 TYW1BQ6NUM6 668 aa8.08□□□□□ -1.12
PDZD8-204ENST00000489491 DDX12PQ92771 950 aa8.08□□□□□ -1.12
PDZD8-204ENST00000489491 PPP1R3GB7ZBB8 358 aa8.07□□□□□ -1.12
PDZD8-204ENST00000489491 C6orf132Q5T0Z8 1188 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms