RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 MICALL2Q8IY33 904 aa9.74□□□□□ -0.85
SRRM1-215ENST00000488317 SLC24A3Q9HC58 644 aa9.74□□□□□ -0.85
SRRM1-215ENST00000488317 ATN1P54259 1190 aaPredicted RBP9.73□□□□□ -0.85
SRRM1-215ENST00000488317 EVX2Q03828 476 aa9.72□□□□□ -0.85
SRRM1-215ENST00000488317 DSG2Q14126 1118 aa9.72□□□□□ -0.85
SRRM1-215ENST00000488317 DPYSL4O14531 572 aa9.71□□□□□ -0.86
SRRM1-215ENST00000488317 PDCD7Q8N8D1 485 aaKnown RBP9.71□□□□□ -0.86
SRRM1-215ENST00000488317 OCEL1Q9H607 264 aa9.71□□□□□ -0.86
SRRM1-215ENST00000488317 MLLT3P42568 568 aaPredicted RBP9.7□□□□□ -0.86
SRRM1-215ENST00000488317 BOLA1Q9Y3E2 137 aa9.7□□□□□ -0.86
SRRM1-215ENST00000488317 ATMINO43313 823 aaPredicted RBP9.69□□□□□ -0.86
SRRM1-215ENST00000488317 ZMYND10O75800 440 aa9.69□□□□□ -0.86
SRRM1-215ENST00000488317 BRPF1P55201 1214 aaPredicted RBP9.69□□□□□ -0.86
SRRM1-215ENST00000488317 NEUROD2Q15784 382 aa9.69□□□□□ -0.86
SRRM1-215ENST00000488317 RBM26Q5T8P6 1007 aaKnown RBP9.69□□□□□ -0.86
SRRM1-215ENST00000488317 EMILIN3Q9NT22 766 aa9.69□□□□□ -0.86
SRRM1-215ENST00000488317 PLCG2P16885 1265 aa9.68□□□□□ -0.86
SRRM1-215ENST00000488317 SPDYE16A6NNV3 312 aaPredicted RBP9.67□□□□□ -0.86
SRRM1-215ENST00000488317 IRX5P78411 483 aaPredicted RBP9.67□□□□□ -0.86
SRRM1-215ENST00000488317 FOXK1P85037 733 aa9.67□□□□□ -0.86
SRRM1-215ENST00000488317 IER5LQ5T953 404 aa9.67□□□□□ -0.86
SRRM1-215ENST00000488317 PLPP6Q8IY26 295 aa9.67□□□□□ -0.86
SRRM1-215ENST00000488317 ASTLQ6HA08 431 aaPredicted RBP9.66□□□□□ -0.86
SRRM1-215ENST00000488317 GPIHBP1Q8IV16 184 aa9.66□□□□□ -0.86
SRRM1-215ENST00000488317 KRI1Q8N9T8 703 aaKnown RBP9.65□□□□□ -0.86
SRRM1-215ENST00000488317 C2orf72A6NCS6 295 aa9.64□□□□□ -0.87
SRRM1-215ENST00000488317 BARGINQ6ZT62 677 aa9.64□□□□□ -0.87
SRRM1-215ENST00000488317 L3MBTL3Q96JM7 780 aaPredicted RBP9.64□□□□□ -0.87
SRRM1-215ENST00000488317 TMEM121BQ9BXQ6 578 aaPredicted RBP9.64□□□□□ -0.87
SRRM1-215ENST00000488317 PDIA6Q15084 440 aa9.63□□□□□ -0.87
SRRM1-215ENST00000488317 SEC24BO95487 1268 aa9.62□□□□□ -0.87
SRRM1-215ENST00000488317 MAP3K9P80192 1104 aa9.62□□□□□ -0.87
SRRM1-215ENST00000488317 TIMELESSQ9UNS1 1208 aa9.61□□□□□ -0.87
SRRM1-215ENST00000488317 ERICH6Q7L0X2 663 aa9.6□□□□□ -0.87
SRRM1-215ENST00000488317 AK7Q96M32 723 aa9.6□□□□□ -0.87
SRRM1-215ENST00000488317 GRXCR2A6NFK2 248 aa9.59□□□□□ -0.87
SRRM1-215ENST00000488317 DCBLD2Q96PD2 775 aa9.59□□□□□ -0.87
SRRM1-215ENST00000488317 KIF3CO14782 793 aa9.58□□□□□ -0.88
SRRM1-215ENST00000488317 GABBR2O75899 941 aa9.58□□□□□ -0.88
SRRM1-215ENST00000488317 UPF1Q92900 1129 aaKnown RBP eCLIP9.58□□□□□ -0.88
SRRM1-215ENST00000488317 NUTM2FA1L443 756 aa9.54□□□□□ -0.88
SRRM1-215ENST00000488317 COLQQ9Y215 455 aaPredicted RBP9.53□□□□□ -0.88
SRRM1-215ENST00000488317 TBC1D12O60347 775 aa9.52□□□□□ -0.89
SRRM1-215ENST00000488317 TMEM92Q6UXU6 159 aa9.52□□□□□ -0.89
SRRM1-215ENST00000488317 C14orf37Q86TY3 774 aa9.52□□□□□ -0.89
SRRM1-215ENST00000488317 PELP1Q8IZL8 1130 aaKnown RBP9.52□□□□□ -0.89
SRRM1-215ENST00000488317 SLC39A7Q92504 469 aa9.52□□□□□ -0.89
SRRM1-215ENST00000488317 OXER1Q8TDS5 423 aa9.5□□□□□ -0.89
SRRM1-215ENST00000488317 DDX12PQ92771 950 aa9.49□□□□□ -0.89
SRRM1-215ENST00000488317 GPBP1L1Q9HC44 474 aaPredicted RBP9.49□□□□□ -0.89
SRRM1-215ENST00000488317 TRIM66O15016 1216 aa9.48□□□□□ -0.89
SRRM1-215ENST00000488317 C7P10643 843 aa9.48□□□□□ -0.89
SRRM1-215ENST00000488317 C3orf67Q6ZVT6 689 aa9.48□□□□□ -0.89
SRRM1-215ENST00000488317 ZNF316A6NFI3 1004 aaPredicted RBP9.47□□□□□ -0.89
SRRM1-215ENST00000488317 PDE4DQ08499 809 aa9.47□□□□□ -0.89
SRRM1-215ENST00000488317 DAXXQ9UER7 740 aaPredicted RBP9.47□□□□□ -0.89
SRRM1-215ENST00000488317 EVI5O60447 810 aa9.46□□□□□ -0.9
SRRM1-215ENST00000488317 OSBPP22059 807 aa9.46□□□□□ -0.9
SRRM1-215ENST00000488317 IL27Q8NEV9 243 aa9.46□□□□□ -0.9
SRRM1-215ENST00000488317 GPR37O15354 613 aa9.45□□□□□ -0.9
SRRM1-215ENST00000488317 PTGER2P43116 358 aa9.45□□□□□ -0.9
SRRM1-215ENST00000488317 KDM4CQ9H3R0 1056 aa9.45□□□□□ -0.9
SRRM1-215ENST00000488317 METRNQ9UJH8 293 aa9.44□□□□□ -0.9
SRRM1-215ENST00000488317 MINK1Q8N4C8 1332 aaPredicted RBP9.44□□□□□ -0.9
SRRM1-215ENST00000488317 FCHSD2O94868 740 aa9.43□□□□□ -0.9
SRRM1-215ENST00000488317 POTEFA5A3E0 1075 aa9.42□□□□□ -0.9
SRRM1-215ENST00000488317 GNPATO15228 680 aa9.42□□□□□ -0.9
SRRM1-215ENST00000488317 MAP2K5Q13163 448 aa9.42□□□□□ -0.9
SRRM1-215ENST00000488317 HIC1Q14526 733 aa9.41□□□□□ -0.9
SRRM1-215ENST00000488317 IRF6O14896 467 aa9.4□□□□□ -0.9
SRRM1-215ENST00000488317 PTCD2Q8WV60 388 aaKnown RBP9.4□□□□□ -0.9
SRRM1-215ENST00000488317 CCDC102AQ96A19 550 aa9.4□□□□□ -0.9
SRRM1-215ENST00000488317 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.37□□□□□ -0.91
SRRM1-215ENST00000488317 SLC34A2O95436 690 aa9.36□□□□□ -0.91
SRRM1-215ENST00000488317 FECHP22830 423 aa9.36□□□□□ -0.91
SRRM1-215ENST00000488317 PRIM1P49642 420 aaKnown RBP9.36□□□□□ -0.91
SRRM1-215ENST00000488317 PTGDRQ13258 359 aa9.35□□□□□ -0.91
SRRM1-215ENST00000488317 POTEHQ6S545 545 aa9.35□□□□□ -0.91
SRRM1-215ENST00000488317 POTEIP0CG38 1075 aa9.34□□□□□ -0.91
SRRM1-215ENST00000488317 ANO8Q9HCE9 1232 aaPredicted RBP9.34□□□□□ -0.91
SRRM1-215ENST00000488317 MAP3K7O43318 606 aa9.33□□□□□ -0.92
SRRM1-215ENST00000488317 RBM33Q96EV2 1170 aaKnown RBP9.33□□□□□ -0.92
SRRM1-215ENST00000488317 EPAS1Q99814 870 aa9.33□□□□□ -0.92
SRRM1-215ENST00000488317 FAM117AQ9C073 453 aa9.33□□□□□ -0.92
SRRM1-215ENST00000488317 PHF14O94880 888 aa9.32□□□□□ -0.92
SRRM1-215ENST00000488317 TTLL12Q14166 644 aaPredicted RBP9.32□□□□□ -0.92
SRRM1-215ENST00000488317 AMHR2Q16671 573 aa9.32□□□□□ -0.92
SRRM1-215ENST00000488317 EN1Q05925 392 aaPredicted RBP9.31□□□□□ -0.92
SRRM1-215ENST00000488317 PCDHGA4Q9Y5G9 962 aa9.31□□□□□ -0.92
SRRM1-215ENST00000488317 PARP9Q8IXQ6 854 aa9.3□□□□□ -0.92
SRRM1-215ENST00000488317 DDRGK1Q96HY6 314 aa9.3□□□□□ -0.92
SRRM1-215ENST00000488317 CDHR5Q9HBB8 845 aa9.29□□□□□ -0.92
SRRM1-215ENST00000488317 TYW1BQ6NUM6 668 aa9.28□□□□□ -0.92
SRRM1-215ENST00000488317 SLAIN1Q8ND83 568 aa9.28□□□□□ -0.92
SRRM1-215ENST00000488317 PCDHGA10Q9Y5H3 936 aa9.28□□□□□ -0.92
SRRM1-215ENST00000488317 SP7Q8TDD2 431 aaPredicted RBP9.26□□□□□ -0.93
SRRM1-215ENST00000488317 NPDC1Q9NQX5 325 aaPredicted RBP9.26□□□□□ -0.93
SRRM1-215ENST00000488317 PLEKHG3A1L390 1219 aa9.25□□□□□ -0.93
SRRM1-215ENST00000488317 TSR1Q2NL82 804 aaKnown RBP9.25□□□□□ -0.93
SRRM1-215ENST00000488317 FBXW7Q969H0 707 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms