RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ESF1Q9H501 851 aaKnown RBP15.81■□□□□ 0.12
TRA2B-214ENST00000487615 PRDM2Q13029 1718 aa15.81■□□□□ 0.12
TRA2B-214ENST00000487615 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.81■□□□□ 0.12
TRA2B-214ENST00000487615 URB2Q14146 1524 aaKnown RBP15.8■□□□□ 0.12
TRA2B-214ENST00000487615 ZNF644Q9H582 1327 aaPredicted RBP15.79■□□□□ 0.12
TRA2B-214ENST00000487615 NEFMP07197 916 aa15.79■□□□□ 0.12
TRA2B-214ENST00000487615 ANP32AP39687 249 aaKnown RBP15.78■□□□□ 0.12
TRA2B-214ENST00000487615 HFM1A2PYH4 1435 aa15.77■□□□□ 0.12
TRA2B-214ENST00000487615 KNSTRNQ9Y448 316 aa15.77■□□□□ 0.11
TRA2B-214ENST00000487615 HECW1Q76N89 1606 aa15.75■□□□□ 0.11
TRA2B-214ENST00000487615 KANK1Q14678 1352 aa15.75■□□□□ 0.11
TRA2B-214ENST00000487615 SENP3-EIF4A1A0A087X0R7 540 aa15.75■□□□□ 0.11
TRA2B-214ENST00000487615 MIA2Q96PC5 1412 aa15.74■□□□□ 0.11
TRA2B-214ENST00000487615 TMF1P82094 1093 aa15.74■□□□□ 0.11
TRA2B-214ENST00000487615 SUPT6HQ7KZ85 1726 aaKnown RBP15.74■□□□□ 0.11
TRA2B-214ENST00000487615 SNAPC4Q5SXM2 1469 aa15.73■□□□□ 0.11
TRA2B-214ENST00000487615 ROCK2O75116 1388 aaKnown RBP15.72■□□□□ 0.11
TRA2B-214ENST00000487615 IQGAP2Q13576 1575 aa15.72■□□□□ 0.11
TRA2B-214ENST00000487615 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.72■□□□□ 0.11
TRA2B-214ENST00000487615 KIAA0586Q9BVV6 1533 aa15.7■□□□□ 0.1
TRA2B-214ENST00000487615 EPRSP07814 1512 aaKnown RBP15.7■□□□□ 0.1
TRA2B-214ENST00000487615 PPP4R2Q9NY27 417 aa15.7■□□□□ 0.1
TRA2B-214ENST00000487615 CC2D1BQ5T0F9 858 aaKnown RBP15.68■□□□□ 0.1
TRA2B-214ENST00000487615 NPM2Q86SE8 214 aaKnown RBP15.67■□□□□ 0.1
TRA2B-214ENST00000487615 SPAG9O60271 1321 aaKnown RBP15.67■□□□□ 0.1
TRA2B-214ENST00000487615 NAIPQ13075 1403 aa15.67■□□□□ 0.1
TRA2B-214ENST00000487615 SLC24A1O60721 1099 aa15.67■□□□□ 0.1
TRA2B-214ENST00000487615 TROQ12816 1431 aaPredicted RBP15.66■□□□□ 0.1
TRA2B-214ENST00000487615 CDK13Q14004 1512 aaKnown RBP15.66■□□□□ 0.1
TRA2B-214ENST00000487615 ANKRD50Q9ULJ7 1429 aa15.65■□□□□ 0.1
TRA2B-214ENST00000487615 CCDC144AA2RUR9 1427 aa15.65■□□□□ 0.1
TRA2B-214ENST00000487615 KIF15Q9NS87 1388 aa15.64■□□□□ 0.09
TRA2B-214ENST00000487615 PRG4Q92954 1404 aaPredicted RBP15.63■□□□□ 0.09
TRA2B-214ENST00000487615 PRKRIP1Q9H875 184 aaPredicted RBP15.63■□□□□ 0.09
TRA2B-214ENST00000487615 KTN1Q86UP2 1357 aaKnown RBP15.63■□□□□ 0.09
TRA2B-214ENST00000487615 USP47Q96K76 1375 aa15.63■□□□□ 0.09
TRA2B-214ENST00000487615 RALBP1Q15311 655 aa15.63■□□□□ 0.09
TRA2B-214ENST00000487615 WDR97A6NE52 1622 aa15.62■□□□□ 0.09
TRA2B-214ENST00000487615 SENP3Q9H4L4 574 aaPredicted RBP15.62■□□□□ 0.09
TRA2B-214ENST00000487615 SYNJ2O15056 1496 aa15.61■□□□□ 0.09
TRA2B-214ENST00000487615 ST20-MTHFSA0A0A6YYL1 179 aa15.61■□□□□ 0.09
TRA2B-214ENST00000487615 KIF3BO15066 747 aa15.61■□□□□ 0.09
TRA2B-214ENST00000487615 DAPK1P53355 1430 aa15.6■□□□□ 0.09
TRA2B-214ENST00000487615 GGT6Q6P531 493 aa15.59■□□□□ 0.09
TRA2B-214ENST00000487615 PTPN23Q9H3S7 1636 aa15.59■□□□□ 0.09
TRA2B-214ENST00000487615 ZBTB47Q9UFB7 747 aaPredicted RBP15.59■□□□□ 0.09
TRA2B-214ENST00000487615 ERICH6BQ5W0A0 696 aa15.58■□□□□ 0.09
TRA2B-214ENST00000487615 GRIN2AQ12879 1464 aa15.58■□□□□ 0.09
TRA2B-214ENST00000487615 CCDC7Q96M83 1385 aa15.58■□□□□ 0.09
TRA2B-214ENST00000487615 B4GALNT3Q6L9W6 998 aa15.58■□□□□ 0.08
TRA2B-214ENST00000487615 CFAP53Q96M91 514 aa15.57■□□□□ 0.08
TRA2B-214ENST00000487615 ZNF608Q9ULD9 1512 aaPredicted RBP15.57■□□□□ 0.08
TRA2B-214ENST00000487615 WASHC2AQ641Q2 1341 aa15.57■□□□□ 0.08
TRA2B-214ENST00000487615 CTTNBP2Q8WZ74 1663 aa15.56■□□□□ 0.08
TRA2B-214ENST00000487615 ROCK1Q13464 1354 aa15.55■□□□□ 0.08
TRA2B-214ENST00000487615 MAGI1Q96QZ7 1491 aaPredicted RBP15.55■□□□□ 0.08
TRA2B-214ENST00000487615 KIF7Q2M1P5 1343 aa15.55■□□□□ 0.08
TRA2B-214ENST00000487615 THOC2Q8NI27 1593 aaKnown RBP15.54■□□□□ 0.08
TRA2B-214ENST00000487615 CNTLNQ9NXG0 1405 aa15.54■□□□□ 0.08
TRA2B-214ENST00000487615 NLRP13Q86W25 1043 aa15.54■□□□□ 0.08
TRA2B-214ENST00000487615 C9orf84Q5VXU9 1444 aa15.53■□□□□ 0.08
TRA2B-214ENST00000487615 PLPPR3Q6T4P5 718 aa15.52■□□□□ 0.08
TRA2B-214ENST00000487615 KIAA1107Q9UPP5 1409 aa15.51■□□□□ 0.07
TRA2B-214ENST00000487615 PLB1Q6P1J6 1458 aa15.51■□□□□ 0.07
TRA2B-214ENST00000487615 EIF3AQ14152 1382 aaKnown RBP15.51■□□□□ 0.07
TRA2B-214ENST00000487615 CFAP43Q8NDM7 1665 aa15.5■□□□□ 0.07
TRA2B-214ENST00000487615 NUDCQ9Y266 331 aa15.5■□□□□ 0.07
TRA2B-214ENST00000487615 NBPF8Q3BBV2 869 aa15.5■□□□□ 0.07
TRA2B-214ENST00000487615 POGKQ9P215 609 aa15.5■□□□□ 0.07
TRA2B-214ENST00000487615 ARID4BQ4LE39 1312 aaPredicted RBP15.5■□□□□ 0.07
TRA2B-214ENST00000487615 ARHGAP5Q13017 1502 aa15.5■□□□□ 0.07
TRA2B-214ENST00000487615 MYBBP1AQ9BQG0 1328 aaKnown RBP15.49■□□□□ 0.07
TRA2B-214ENST00000487615 TNNT2P45379 298 aaPredicted RBP15.49■□□□□ 0.07
TRA2B-214ENST00000487615 MAPKBP1O60336 1514 aa15.49■□□□□ 0.07
TRA2B-214ENST00000487615 ZBED9Q6R2W3 1325 aa15.48■□□□□ 0.07
TRA2B-214ENST00000487615 ABCC5O15440 1437 aa15.48■□□□□ 0.07
TRA2B-214ENST00000487615 BCL11AQ9H165 835 aa15.47■□□□□ 0.07
TRA2B-214ENST00000487615 NEUROD2Q15784 382 aa15.47■□□□□ 0.07
TRA2B-214ENST00000487615 TSHZ2Q9NRE2 1034 aa15.47■□□□□ 0.07
TRA2B-214ENST00000487615 UPF2Q9HAU5 1272 aaKnown RBP15.46■□□□□ 0.07
TRA2B-214ENST00000487615 RBM19Q9Y4C8 960 aaKnown RBP15.46■□□□□ 0.06
TRA2B-214ENST00000487615 UGGT2Q9NYU1 1516 aa15.46■□□□□ 0.06
TRA2B-214ENST00000487615 PTPRKQ15262 1439 aa15.45■□□□□ 0.06
TRA2B-214ENST00000487615 CAMSAP2Q08AD1 1489 aa15.45■□□□□ 0.06
TRA2B-214ENST00000487615 MORC1Q86VD1 984 aa15.44■□□□□ 0.06
TRA2B-214ENST00000487615 RCAN3Q9UKA8 241 aa15.44■□□□□ 0.06
TRA2B-214ENST00000487615 AKNAQ7Z591 1439 aa15.44■□□□□ 0.06
TRA2B-214ENST00000487615 PANK3Q9H999 370 aa15.44■□□□□ 0.06
TRA2B-214ENST00000487615 WASHC2CQ9Y4E1 1318 aa15.44■□□□□ 0.06
TRA2B-214ENST00000487615 ANKRD30BQ9BXX2 1392 aa15.43■□□□□ 0.06
TRA2B-214ENST00000487615 KIF21AQ7Z4S6 1674 aa15.43■□□□□ 0.06
TRA2B-214ENST00000487615 ANP32EQ9BTT0 268 aa15.43■□□□□ 0.06
TRA2B-214ENST00000487615 PLEKHH2Q8IVE3 1493 aa15.42■□□□□ 0.06
TRA2B-214ENST00000487615 ARHGEF11O15085 1522 aa15.42■□□□□ 0.06
TRA2B-214ENST00000487615 ADAMTS12P58397 1594 aa15.42■□□□□ 0.06
TRA2B-214ENST00000487615 PDE3BQ13370 1112 aa15.41■□□□□ 0.06
TRA2B-214ENST00000487615 SRPK2P78362 688 aaKnown RBP15.41■□□□□ 0.06
TRA2B-214ENST00000487615 OSCARQ8IYS5 282 aa15.41■□□□□ 0.06
TRA2B-214ENST00000487615 SAFB2Q14151 953 aaKnown RBP eCLIP15.41■□□□□ 0.06
TRA2B-214ENST00000487615 MAPK8IP3Q9UPT6 1336 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms