RNA–Protein interactions for RNA: ENST00000487065.5

STAG1-208, Transcript of stromal antigen 1, humanhuman

TSL 1 (best)

Gene STAG1, Length 2,914 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-208ENST00000487065 ATP10AO60312 1499 aa12.35□□□□□ -0.43
STAG1-208ENST00000487065 CNTLNQ9NXG0 1405 aa12.34□□□□□ -0.43
STAG1-208ENST00000487065 NPATQ14207 1427 aa12.34□□□□□ -0.43
STAG1-208ENST00000487065 MYO5CQ9NQX4 1742 aa12.34□□□□□ -0.43
STAG1-208ENST00000487065 HECW1Q76N89 1606 aa12.34□□□□□ -0.43
STAG1-208ENST00000487065 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.33□□□□□ -0.44
STAG1-208ENST00000487065 SIGLEC1Q9BZZ2 1709 aa12.33□□□□□ -0.44
STAG1-208ENST00000487065 PLA2R1Q13018 1463 aa12.32□□□□□ -0.44
STAG1-208ENST00000487065 NUP153P49790 1475 aaKnown RBP12.32□□□□□ -0.44
STAG1-208ENST00000487065 MLH3Q9UHC1 1453 aa12.29□□□□□ -0.44
STAG1-208ENST00000487065 PLCH2O75038 1416 aa12.29□□□□□ -0.44
STAG1-208ENST00000487065 C3P01024 1663 aa12.28□□□□□ -0.44
STAG1-208ENST00000487065 DIP2CQ9Y2E4 1556 aa12.26□□□□□ -0.45
STAG1-208ENST00000487065 ZNF518AQ6AHZ1 1483 aa12.26□□□□□ -0.45
STAG1-208ENST00000487065 ITSN2Q9NZM3 1697 aa12.25□□□□□ -0.45
STAG1-208ENST00000487065 UHRF1BP1Q6BDS2 1440 aa12.25□□□□□ -0.45
STAG1-208ENST00000487065 NCOA1Q15788 1441 aa12.25□□□□□ -0.45
STAG1-208ENST00000487065 CPS1P31327 1500 aa12.22□□□□□ -0.45
STAG1-208ENST00000487065 PREX2Q70Z35 1606 aa12.21□□□□□ -0.45
STAG1-208ENST00000487065 KIF14Q15058 1648 aa12.21□□□□□ -0.45
STAG1-208ENST00000487065 TRAPPC8Q9Y2L5 1435 aa12.19□□□□□ -0.46
STAG1-208ENST00000487065 PLXNC1O60486 1568 aa12.18□□□□□ -0.46
STAG1-208ENST00000487065 ABCC1P33527 1531 aa12.18□□□□□ -0.46
STAG1-208ENST00000487065 ABCA6Q8N139 1617 aa12.18□□□□□ -0.46
STAG1-208ENST00000487065 TCOF1Q13428 1488 aaKnown RBP12.17□□□□□ -0.46
STAG1-208ENST00000487065 PPP6R1Q9UPN7 881 aa12.17□□□□□ -0.46
STAG1-208ENST00000487065 SYNMO15061 1565 aa12.16□□□□□ -0.46
STAG1-208ENST00000487065 DEPDC5O75140 1603 aa12.16□□□□□ -0.46
STAG1-208ENST00000487065 MYO3AQ8NEV4 1616 aa12.15□□□□□ -0.46
STAG1-208ENST00000487065 POLR1AO95602 1720 aaPredicted RBP12.15□□□□□ -0.47
STAG1-208ENST00000487065 ADGBQ8N7X0 1667 aa12.13□□□□□ -0.47
STAG1-208ENST00000487065 PLEKHH2Q8IVE3 1493 aa12.12□□□□□ -0.47
STAG1-208ENST00000487065 FMN1Q68DA7 1419 aa12.12□□□□□ -0.47
STAG1-208ENST00000487065 INO80Q9ULG1 1556 aaPredicted RBP12.12□□□□□ -0.47
STAG1-208ENST00000487065 CDC42BPBQ9Y5S2 1711 aa12.11□□□□□ -0.47
STAG1-208ENST00000487065 CCDC18Q5T9S5 1454 aa12.11□□□□□ -0.47
STAG1-208ENST00000487065 KIDINS220Q9ULH0 1771 aa12.11□□□□□ -0.47
STAG1-208ENST00000487065 SCAPERQ9BY12 1400 aa12.11□□□□□ -0.47
STAG1-208ENST00000487065 TROQ12816 1431 aaPredicted RBP12.1□□□□□ -0.47
STAG1-208ENST00000487065 PKD2Q13563 968 aa12.1□□□□□ -0.47
STAG1-208ENST00000487065 MED1Q15648 1581 aaPredicted RBP12.1□□□□□ -0.47
STAG1-208ENST00000487065 DISP3Q9P2K9 1392 aa12.1□□□□□ -0.47
STAG1-208ENST00000487065 PLEKHD1A6NEE1 506 aa12.09□□□□□ -0.47
STAG1-208ENST00000487065 CLIP1P30622 1438 aa12.08□□□□□ -0.48
STAG1-208ENST00000487065 CEP170BQ9Y4F5 1589 aaPredicted RBP12.08□□□□□ -0.48
STAG1-208ENST00000487065 KIAA1107Q9UPP5 1409 aa12.07□□□□□ -0.48
STAG1-208ENST00000487065 CAMSAP1Q5T5Y3 1602 aa12.07□□□□□ -0.48
STAG1-208ENST00000487065 MED14O60244 1454 aa12.06□□□□□ -0.48
STAG1-208ENST00000487065 SUPT6HQ7KZ85 1726 aaKnown RBP12.06□□□□□ -0.48
STAG1-208ENST00000487065 RAPGEF3O95398 923 aa12.06□□□□□ -0.48
STAG1-208ENST00000487065 A2ML1A8K2U0 1454 aa12.05□□□□□ -0.48
STAG1-208ENST00000487065 EFCAB2Q5VUJ9 269 aa12.05□□□□□ -0.48
STAG1-208ENST00000487065 KCNH8Q96L42 1107 aa12.05□□□□□ -0.48
STAG1-208ENST00000487065 ZC3H13Q5T200 1668 aaKnown RBP12.05□□□□□ -0.48
STAG1-208ENST00000487065 RNF17Q9BXT8 1623 aaKnown RBP12.04□□□□□ -0.48
STAG1-208ENST00000487065 KDM5AP29375 1690 aaKnown RBP12.04□□□□□ -0.48
STAG1-208ENST00000487065 SAMD9LQ8IVG5 1584 aa12.04□□□□□ -0.48
STAG1-208ENST00000487065 CDC42BPAQ5VT25 1732 aa12.03□□□□□ -0.48
STAG1-208ENST00000487065 PTPRKQ15262 1439 aa12.02□□□□□ -0.48
STAG1-208ENST00000487065 ILDR2Q71H61 639 aa12.02□□□□□ -0.49
STAG1-208ENST00000487065 ARID4BQ4LE39 1312 aaPredicted RBP12.01□□□□□ -0.49
STAG1-208ENST00000487065 RTEL1-TNFRSF6BF6WH68 1400 aa12.01□□□□□ -0.49
STAG1-208ENST00000487065 NEURL4Q96JN8 1562 aa12□□□□□ -0.49
STAG1-208ENST00000487065 VWDEQ8N2E2 1590 aa12□□□□□ -0.49
STAG1-208ENST00000487065 ARHGAP5Q13017 1502 aa11.99□□□□□ -0.49
STAG1-208ENST00000487065 LRRIQ1Q96JM4 1722 aa11.99□□□□□ -0.49
STAG1-208ENST00000487065 CDK11AQ9UQ88 783 aaPredicted RBP11.99□□□□□ -0.49
STAG1-208ENST00000487065 DNMT1P26358 1616 aaKnown RBP11.99□□□□□ -0.49
STAG1-208ENST00000487065 CAMSAP2Q08AD1 1489 aa11.99□□□□□ -0.49
STAG1-208ENST00000487065 NLRP1Q9C000 1473 aa11.98□□□□□ -0.49
STAG1-208ENST00000487065 CLTCQ00610 1675 aaKnown RBP11.97□□□□□ -0.49
STAG1-208ENST00000487065 EIF2AK4Q9P2K8 1649 aaKnown RBP11.97□□□□□ -0.49
STAG1-208ENST00000487065 ATP7AQ04656 1500 aa11.96□□□□□ -0.49
STAG1-208ENST00000487065 KDM5DQ9BY66 1539 aa11.96□□□□□ -0.49
STAG1-208ENST00000487065 CSRNP3Q8WYN3 585 aa11.95□□□□□ -0.5
STAG1-208ENST00000487065 CASKIN1Q8WXD9 1431 aa11.95□□□□□ -0.5
STAG1-208ENST00000487065 CDK13Q14004 1512 aaKnown RBP11.95□□□□□ -0.5
STAG1-208ENST00000487065 ALKQ9UM73 1620 aa11.94□□□□□ -0.5
STAG1-208ENST00000487065 FYCO1Q9BQS8 1478 aa11.94□□□□□ -0.5
STAG1-208ENST00000487065 PZPP20742 1482 aa11.93□□□□□ -0.5
STAG1-208ENST00000487065 MAST1Q9Y2H9 1570 aa11.93□□□□□ -0.5
STAG1-208ENST00000487065 MAP3K1Q13233 1512 aa11.92□□□□□ -0.5
STAG1-208ENST00000487065 SHANK2Q9UPX8 1470 aa11.92□□□□□ -0.5
STAG1-208ENST00000487065 HSPA2P54652 639 aa11.91□□□□□ -0.5
STAG1-208ENST00000487065 A2MP01023 1474 aa11.91□□□□□ -0.5
STAG1-208ENST00000487065 LRRC9Q6ZRR7 1453 aa11.91□□□□□ -0.5
STAG1-208ENST00000487065 IQGAP1P46940 1657 aa11.91□□□□□ -0.5
STAG1-208ENST00000487065 ARHGEF5Q12774 1597 aa11.9□□□□□ -0.51
STAG1-208ENST00000487065 ARHGAP35Q9NRY4 1499 aa11.89□□□□□ -0.51
STAG1-208ENST00000487065 ZMYM3Q14202 1370 aa11.87□□□□□ -0.51
STAG1-208ENST00000487065 TTBK1Q5TCY1 1321 aaPredicted RBP11.86□□□□□ -0.51
STAG1-208ENST00000487065 NWD1Q149M9 1564 aa11.86□□□□□ -0.51
STAG1-208ENST00000487065 ABCC3O15438 1527 aa11.85□□□□□ -0.51
STAG1-208ENST00000487065 SLIT1O75093 1534 aa11.85□□□□□ -0.51
STAG1-208ENST00000487065 NCOA2Q15596 1464 aa11.84□□□□□ -0.51
STAG1-208ENST00000487065 ARHGAP23Q9P227 1491 aa11.84□□□□□ -0.51
STAG1-208ENST00000487065 GPATCH8Q9UKJ3 1502 aaKnown RBP11.82□□□□□ -0.52
STAG1-208ENST00000487065 EHBP1L1Q8N3D4 1523 aa11.82□□□□□ -0.52
STAG1-208ENST00000487065 TOM1O60784 492 aa11.81□□□□□ -0.52
STAG1-208ENST00000487065 SYCP2Q9BX26 1530 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms