RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 TMEM121BQ9BXQ6 578 aaPredicted RBP11.25□□□□□ -0.61
SRRM1-213ENST00000485441 IER5LQ5T953 404 aa11.23□□□□□ -0.61
SRRM1-213ENST00000485441 OCEL1Q9H607 264 aa11.23□□□□□ -0.61
SRRM1-213ENST00000485441 PPP1R15BQ5SWA1 713 aa11.22□□□□□ -0.61
SRRM1-213ENST00000485441 DSG2Q14126 1118 aa11.2□□□□□ -0.62
SRRM1-213ENST00000485441 GABBR2O75899 941 aa11.19□□□□□ -0.62
SRRM1-213ENST00000485441 ZC3H15Q8WU90 426 aaKnown RBP11.19□□□□□ -0.62
SRRM1-213ENST00000485441 TULP1O00294 542 aaPredicted RBP11.18□□□□□ -0.62
SRRM1-213ENST00000485441 FOXK1P85037 733 aa11.18□□□□□ -0.62
SRRM1-213ENST00000485441 EMILIN3Q9NT22 766 aa11.18□□□□□ -0.62
SRRM1-213ENST00000485441 KIF3CO14782 793 aa11.17□□□□□ -0.62
SRRM1-213ENST00000485441 PELP1Q8IZL8 1130 aaKnown RBP11.16□□□□□ -0.62
SRRM1-213ENST00000485441 BOLA1Q9Y3E2 137 aa11.16□□□□□ -0.62
SRRM1-213ENST00000485441 SMYD5Q6GMV2 418 aa11.13□□□□□ -0.63
SRRM1-213ENST00000485441 C2orf72A6NCS6 295 aa11.12□□□□□ -0.63
SRRM1-213ENST00000485441 MLLT3P42568 568 aaPredicted RBP11.11□□□□□ -0.63
SRRM1-213ENST00000485441 TMC2Q8TDI7 906 aa11.11□□□□□ -0.63
SRRM1-213ENST00000485441 DPYSL4O14531 572 aa11.1□□□□□ -0.63
SRRM1-213ENST00000485441 COLQQ9Y215 455 aaPredicted RBP11.1□□□□□ -0.63
SRRM1-213ENST00000485441 POTEFA5A3E0 1075 aa11.09□□□□□ -0.63
SRRM1-213ENST00000485441 ZMYND10O75800 440 aa11.09□□□□□ -0.63
SRRM1-213ENST00000485441 PLCG2P16885 1265 aa11.09□□□□□ -0.63
SRRM1-213ENST00000485441 TMEM92Q6UXU6 159 aa11.09□□□□□ -0.63
SRRM1-213ENST00000485441 PLPP6Q8IY26 295 aa11.09□□□□□ -0.63
SRRM1-213ENST00000485441 SPDYE16A6NNV3 312 aaPredicted RBP11.08□□□□□ -0.64
SRRM1-213ENST00000485441 PDIA6Q15084 440 aa11.08□□□□□ -0.64
SRRM1-213ENST00000485441 L3MBTL3Q96JM7 780 aaPredicted RBP11.08□□□□□ -0.64
SRRM1-213ENST00000485441 RBM26Q5T8P6 1007 aaKnown RBP11.05□□□□□ -0.64
SRRM1-213ENST00000485441 BARGINQ6ZT62 677 aa11.04□□□□□ -0.64
SRRM1-213ENST00000485441 POTEIP0CG38 1075 aa11.03□□□□□ -0.64
SRRM1-213ENST00000485441 DCBLD2Q96PD2 775 aa11.03□□□□□ -0.64
SRRM1-213ENST00000485441 SLC24A3Q9HC58 644 aa11.03□□□□□ -0.64
SRRM1-213ENST00000485441 BRPF1P55201 1214 aaPredicted RBP11.02□□□□□ -0.65
SRRM1-213ENST00000485441 SLC39A7Q92504 469 aa11.02□□□□□ -0.65
SRRM1-213ENST00000485441 G3V3G9 751 aa11.01□□□□□ -0.65
SRRM1-213ENST00000485441 C7P10643 843 aa11.01□□□□□ -0.65
SRRM1-213ENST00000485441 TMEM132AQ24JP5 1023 aa11.01□□□□□ -0.65
SRRM1-213ENST00000485441 SEC24BO95487 1268 aa10.99□□□□□ -0.65
SRRM1-213ENST00000485441 OXER1Q8TDS5 423 aa10.99□□□□□ -0.65
SRRM1-213ENST00000485441 MAP3K9P80192 1104 aa10.95□□□□□ -0.66
SRRM1-213ENST00000485441 GPIHBP1Q8IV16 184 aa10.95□□□□□ -0.66
SRRM1-213ENST00000485441 GPR37O15354 613 aa10.94□□□□□ -0.66
SRRM1-213ENST00000485441 PTGER2P43116 358 aa10.94□□□□□ -0.66
SRRM1-213ENST00000485441 METRNQ9UJH8 293 aa10.94□□□□□ -0.66
SRRM1-213ENST00000485441 SP7Q8TDD2 431 aaPredicted RBP10.93□□□□□ -0.66
SRRM1-213ENST00000485441 OSBPP22059 807 aa10.91□□□□□ -0.66
SRRM1-213ENST00000485441 UPF1Q92900 1129 aaKnown RBP eCLIP10.91□□□□□ -0.66
SRRM1-213ENST00000485441 GTF3C3Q9Y5Q9 886 aa10.91□□□□□ -0.66
SRRM1-213ENST00000485441 PTCD2Q8WV60 388 aaKnown RBP10.9□□□□□ -0.66
SRRM1-213ENST00000485441 AK7Q96M32 723 aa10.89□□□□□ -0.67
SRRM1-213ENST00000485441 GRXCR2A6NFK2 248 aa10.88□□□□□ -0.67
SRRM1-213ENST00000485441 SLC34A2O95436 690 aa10.88□□□□□ -0.67
SRRM1-213ENST00000485441 NEUROD2Q15784 382 aa10.88□□□□□ -0.67
SRRM1-213ENST00000485441 ANO8Q9HCE9 1232 aaPredicted RBP10.87□□□□□ -0.67
SRRM1-213ENST00000485441 TBC1D12O60347 775 aa10.86□□□□□ -0.67
SRRM1-213ENST00000485441 EVI5O60447 810 aa10.85□□□□□ -0.67
SRRM1-213ENST00000485441 PRIM1P49642 420 aaKnown RBP10.85□□□□□ -0.67
SRRM1-213ENST00000485441 TRIM66O15016 1216 aa10.83□□□□□ -0.68
SRRM1-213ENST00000485441 C3orf67Q6ZVT6 689 aa10.83□□□□□ -0.68
SRRM1-213ENST00000485441 KRI1Q8N9T8 703 aaKnown RBP10.83□□□□□ -0.68
SRRM1-213ENST00000485441 DDX12PQ92771 950 aa10.82□□□□□ -0.68
SRRM1-213ENST00000485441 KDM4FA0A1W2PPD8 638 aa10.79□□□□□ -0.68
SRRM1-213ENST00000485441 NUTM2FA1L443 756 aa10.79□□□□□ -0.68
SRRM1-213ENST00000485441 TIMELESSQ9UNS1 1208 aa10.79□□□□□ -0.68
SRRM1-213ENST00000485441 MINK1Q8N4C8 1332 aaPredicted RBP10.79□□□□□ -0.68
SRRM1-213ENST00000485441 GPBP1L1Q9HC44 474 aaPredicted RBP10.77□□□□□ -0.69
SRRM1-213ENST00000485441 GNPATO15228 680 aa10.76□□□□□ -0.69
SRRM1-213ENST00000485441 FECHP22830 423 aa10.76□□□□□ -0.69
SRRM1-213ENST00000485441 PDE4DQ08499 809 aa10.76□□□□□ -0.69
SRRM1-213ENST00000485441 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.76□□□□□ -0.69
SRRM1-213ENST00000485441 IRF6O14896 467 aa10.75□□□□□ -0.69
SRRM1-213ENST00000485441 POTEJP0CG39 1038 aa10.75□□□□□ -0.69
SRRM1-213ENST00000485441 MAP2K5Q13163 448 aa10.75□□□□□ -0.69
SRRM1-213ENST00000485441 HIC1Q14526 733 aa10.75□□□□□ -0.69
SRRM1-213ENST00000485441 PTGDRQ13258 359 aa10.74□□□□□ -0.69
SRRM1-213ENST00000485441 FCHSD2O94868 740 aa10.73□□□□□ -0.69
SRRM1-213ENST00000485441 KDM4CQ9H3R0 1056 aa10.73□□□□□ -0.69
SRRM1-213ENST00000485441 NPDC1Q9NQX5 325 aaPredicted RBP10.73□□□□□ -0.69
SRRM1-213ENST00000485441 PCDHGA4Q9Y5G9 962 aa10.73□□□□□ -0.69
SRRM1-213ENST00000485441 PHF14O94880 888 aa10.72□□□□□ -0.69
SRRM1-213ENST00000485441 CCDC102AQ96A19 550 aa10.71□□□□□ -0.69
SRRM1-213ENST00000485441 POTEB2H3BUK9 544 aa10.7□□□□□ -0.7
SRRM1-213ENST00000485441 EPAS1Q99814 870 aa10.7□□□□□ -0.7
SRRM1-213ENST00000485441 PCDHGA10Q9Y5H3 936 aa10.7□□□□□ -0.7
SRRM1-213ENST00000485441 EN1Q05925 392 aaPredicted RBP10.69□□□□□ -0.7
SRRM1-213ENST00000485441 AMHR2Q16671 573 aa10.69□□□□□ -0.7
SRRM1-213ENST00000485441 ZNF316A6NFI3 1004 aaPredicted RBP10.67□□□□□ -0.7
SRRM1-213ENST00000485441 SLAIN1Q8ND83 568 aa10.66□□□□□ -0.7
SRRM1-213ENST00000485441 CDHR5Q9HBB8 845 aa10.66□□□□□ -0.7
SRRM1-213ENST00000485441 HOXB3P14651 431 aaPredicted RBP10.65□□□□□ -0.7
SRRM1-213ENST00000485441 ERICH6Q7L0X2 663 aa10.65□□□□□ -0.7
SRRM1-213ENST00000485441 IL27Q8NEV9 243 aa10.65□□□□□ -0.7
SRRM1-213ENST00000485441 FOSBP53539 338 aa10.63□□□□□ -0.71
SRRM1-213ENST00000485441 TYW1BQ6NUM6 668 aa10.63□□□□□ -0.71
SRRM1-213ENST00000485441 JPH4Q96JJ6 628 aa10.63□□□□□ -0.71
SRRM1-213ENST00000485441 FAM117AQ9C073 453 aa10.63□□□□□ -0.71
SRRM1-213ENST00000485441 DAXXQ9UER7 740 aaPredicted RBP10.63□□□□□ -0.71
SRRM1-213ENST00000485441 TSR1Q2NL82 804 aaKnown RBP10.62□□□□□ -0.71
SRRM1-213ENST00000485441 PARP9Q8IXQ6 854 aa10.62□□□□□ -0.71
SRRM1-213ENST00000485441 FBXW7Q969H0 707 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms