RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 GLI2P10070 1586 aa14.26□□□□□ -0.13
UFD1-208ENST00000484101 ACIN1Q9UKV3 1341 aaKnown RBP14.25□□□□□ -0.13
UFD1-208ENST00000484101 TROQ12816 1431 aaPredicted RBP14.24□□□□□ -0.13
UFD1-208ENST00000484101 GCC2Q8IWJ2 1684 aa14.23□□□□□ -0.13
UFD1-208ENST00000484101 FAM50AQ14320 339 aaKnown RBP14.23□□□□□ -0.13
UFD1-208ENST00000484101 RAB3GAP2Q9H2M9 1393 aa14.22□□□□□ -0.13
UFD1-208ENST00000484101 HFM1A2PYH4 1435 aa14.22□□□□□ -0.13
UFD1-208ENST00000484101 KIF14Q15058 1648 aa14.2□□□□□ -0.14
UFD1-208ENST00000484101 PLB1Q6P1J6 1458 aa14.19□□□□□ -0.14
UFD1-208ENST00000484101 DNMT1P26358 1616 aaKnown RBP14.18□□□□□ -0.14
UFD1-208ENST00000484101 ASXL2Q76L83 1435 aa14.17□□□□□ -0.14
UFD1-208ENST00000484101 SPATA31D1Q6ZQQ2 1576 aa14.16□□□□□ -0.14
UFD1-208ENST00000484101 MAP3K4Q9Y6R4 1608 aa14.15□□□□□ -0.14
UFD1-208ENST00000484101 CERKQ8TCT0 537 aa14.15□□□□□ -0.14
UFD1-208ENST00000484101 PTPRGP23470 1445 aa14.15□□□□□ -0.14
UFD1-208ENST00000484101 TEX14Q8IWB6 1497 aa14.14□□□□□ -0.15
UFD1-208ENST00000484101 ITGAEP38570 1179 aa14.14□□□□□ -0.15
UFD1-208ENST00000484101 ADGBQ8N7X0 1667 aa14.14□□□□□ -0.15
UFD1-208ENST00000484101 ROCK1Q13464 1354 aa14.13□□□□□ -0.15
UFD1-208ENST00000484101 ABCC2Q92887 1545 aa14.13□□□□□ -0.15
UFD1-208ENST00000484101 CROCC2H7BZ55 1655 aa14.12□□□□□ -0.15
UFD1-208ENST00000484101 UACAQ9BZF9 1416 aa14.12□□□□□ -0.15
UFD1-208ENST00000484101 NAIPQ13075 1403 aa14.11□□□□□ -0.15
UFD1-208ENST00000484101 ATP10BO94823 1461 aa14.11□□□□□ -0.15
UFD1-208ENST00000484101 PTPRMP28827 1452 aa14.11□□□□□ -0.15
UFD1-208ENST00000484101 CDC42BPAQ5VT25 1732 aa14.1□□□□□ -0.15
UFD1-208ENST00000484101 TIMELESSQ9UNS1 1208 aa14.09□□□□□ -0.15
UFD1-208ENST00000484101 UHRF1BP1LA0JNW5 1464 aa14.09□□□□□ -0.15
UFD1-208ENST00000484101 DAPK1P53355 1430 aa14.08□□□□□ -0.15
UFD1-208ENST00000484101 PTPRKQ15262 1439 aa14.08□□□□□ -0.15
UFD1-208ENST00000484101 CAMSAP2Q08AD1 1489 aa14.07□□□□□ -0.16
UFD1-208ENST00000484101 SHANK2Q9UPX8 1470 aa14.07□□□□□ -0.16
UFD1-208ENST00000484101 GPATCH8Q9UKJ3 1502 aaKnown RBP14.07□□□□□ -0.16
UFD1-208ENST00000484101 PLEKHD1A6NEE1 506 aa14.07□□□□□ -0.16
UFD1-208ENST00000484101 PREX2Q70Z35 1606 aa14.06□□□□□ -0.16
UFD1-208ENST00000484101 ADAMTSL3P82987 1691 aa14.05□□□□□ -0.16
UFD1-208ENST00000484101 ADGRL2O95490 1459 aa14.05□□□□□ -0.16
UFD1-208ENST00000484101 ARHGEF5Q12774 1597 aa14.04□□□□□ -0.16
UFD1-208ENST00000484101 ZNF316A6NFI3 1004 aaPredicted RBP14.03□□□□□ -0.16
UFD1-208ENST00000484101 ABCC5O15440 1437 aa14.02□□□□□ -0.16
UFD1-208ENST00000484101 MYO5CQ9NQX4 1742 aa14.01□□□□□ -0.17
UFD1-208ENST00000484101 CFDP1Q9UEE9 299 aaPredicted RBP14.01□□□□□ -0.17
UFD1-208ENST00000484101 ZCCHC11Q5TAX3 1644 aaKnown RBP14□□□□□ -0.17
UFD1-208ENST00000484101 KDM5BQ9UGL1 1544 aa14□□□□□ -0.17
UFD1-208ENST00000484101 ARID3CA6NKF2 412 aa13.99□□□□□ -0.17
UFD1-208ENST00000484101 PLEKHH2Q8IVE3 1493 aa13.99□□□□□ -0.17
UFD1-208ENST00000484101 HSPA2P54652 639 aa13.98□□□□□ -0.17
UFD1-208ENST00000484101 CDC42BPBQ9Y5S2 1711 aa13.98□□□□□ -0.17
UFD1-208ENST00000484101 ARAP3Q8WWN8 1544 aa13.97□□□□□ -0.17
UFD1-208ENST00000484101 MAST1Q9Y2H9 1570 aa13.96□□□□□ -0.18
UFD1-208ENST00000484101 RSPH4AQ5TD94 716 aa13.95□□□□□ -0.18
UFD1-208ENST00000484101 ANKRD30AQ9BXX3 1397 aa13.95□□□□□ -0.18
UFD1-208ENST00000484101 MADDQ8WXG6 1647 aa13.93□□□□□ -0.18
UFD1-208ENST00000484101 CCDC141Q6ZP82 1450 aa13.93□□□□□ -0.18
UFD1-208ENST00000484101 TTC37Q6PGP7 1564 aa13.93□□□□□ -0.18
UFD1-208ENST00000484101 SAMD9LQ8IVG5 1584 aa13.93□□□□□ -0.18
UFD1-208ENST00000484101 NCOA1Q15788 1441 aa13.93□□□□□ -0.18
UFD1-208ENST00000484101 DIEXFQ68CQ4 756 aaKnown RBP13.93□□□□□ -0.18
UFD1-208ENST00000484101 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.93□□□□□ -0.18
UFD1-208ENST00000484101 BCORL1Q5H9F3 1711 aa13.92□□□□□ -0.18
UFD1-208ENST00000484101 KIAA1107Q9UPP5 1409 aa13.91□□□□□ -0.18
UFD1-208ENST00000484101 C9orf84Q5VXU9 1444 aa13.9□□□□□ -0.18
UFD1-208ENST00000484101 ARHGAP5Q13017 1502 aa13.9□□□□□ -0.18
UFD1-208ENST00000484101 KDM5DQ9BY66 1539 aa13.9□□□□□ -0.18
UFD1-208ENST00000484101 RRP7BPQ9NSQ0 103 aa13.9□□□□□ -0.18
UFD1-208ENST00000484101 PLXNC1O60486 1568 aa13.9□□□□□ -0.18
UFD1-208ENST00000484101 CD109Q6YHK3 1445 aa13.9□□□□□ -0.19
UFD1-208ENST00000484101 TONSLQ96HA7 1378 aa13.89□□□□□ -0.19
UFD1-208ENST00000484101 MBD5Q9P267 1494 aa13.88□□□□□ -0.19
UFD1-208ENST00000484101 WDR7Q9Y4E6 1490 aa13.87□□□□□ -0.19
UFD1-208ENST00000484101 CHIC2Q9UKJ5 165 aa13.87□□□□□ -0.19
UFD1-208ENST00000484101 ZNF644Q9H582 1327 aaPredicted RBP13.87□□□□□ -0.19
UFD1-208ENST00000484101 RIMS1Q86UR5 1692 aaKnown RBP13.85□□□□□ -0.19
UFD1-208ENST00000484101 PLCH2O75038 1416 aa13.85□□□□□ -0.19
UFD1-208ENST00000484101 ANKRD50Q9ULJ7 1429 aa13.85□□□□□ -0.19
UFD1-208ENST00000484101 TSPY4P0CV99 314 aa13.85□□□□□ -0.19
UFD1-208ENST00000484101 TSPY10P0CW01 314 aa13.85□□□□□ -0.19
UFD1-208ENST00000484101 ABCA9Q8IUA7 1624 aa13.85□□□□□ -0.19
UFD1-208ENST00000484101 SYCP2Q9BX26 1530 aa13.85□□□□□ -0.19
UFD1-208ENST00000484101 DENND4BO75064 1496 aaPredicted RBP13.84□□□□□ -0.19
UFD1-208ENST00000484101 ABCC1P33527 1531 aa13.84□□□□□ -0.19
UFD1-208ENST00000484101 TRIM52Q96A61 297 aa13.83□□□□□ -0.2
UFD1-208ENST00000484101 ZNF777Q9ULD5 760 aaPredicted RBP13.83□□□□□ -0.2
UFD1-208ENST00000484101 MPHOSPH9Q99550 1183 aa13.82□□□□□ -0.2
UFD1-208ENST00000484101 PZPP20742 1482 aa13.81□□□□□ -0.2
UFD1-208ENST00000484101 RPRD2Q5VT52 1461 aaKnown RBP13.81□□□□□ -0.2
UFD1-208ENST00000484101 UNC13BO14795 1591 aa13.81□□□□□ -0.2
UFD1-208ENST00000484101 CFAP74Q9C0B2 1584 aa13.81□□□□□ -0.2
UFD1-208ENST00000484101 KIF15Q9NS87 1388 aa13.81□□□□□ -0.2
UFD1-208ENST00000484101 PPP1R15AO75807 674 aaPredicted RBP13.8□□□□□ -0.2
UFD1-208ENST00000484101 SIN3AQ96ST3 1273 aa13.8□□□□□ -0.2
UFD1-208ENST00000484101 DUOX2Q9NRD8 1548 aa13.8□□□□□ -0.2
UFD1-208ENST00000484101 NEUROD1Q13562 356 aa13.79□□□□□ -0.2
UFD1-208ENST00000484101 ARID4BQ4LE39 1312 aaPredicted RBP13.79□□□□□ -0.2
UFD1-208ENST00000484101 ANKRD30BQ9BXX2 1392 aa13.79□□□□□ -0.2
UFD1-208ENST00000484101 EFCAB2Q5VUJ9 269 aa13.78□□□□□ -0.2
UFD1-208ENST00000484101 KCNH8Q96L42 1107 aa13.77□□□□□ -0.21
UFD1-208ENST00000484101 ERBINQ96RT1 1412 aa13.77□□□□□ -0.21
UFD1-208ENST00000484101 RTEL1-TNFRSF6BF6WH68 1400 aa13.76□□□□□ -0.21
UFD1-208ENST00000484101 PLPPR3Q6T4P5 718 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms