RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 C2orf72A6NCS6 295 aa6.31□□□□□ -1.4
ITGB1-213ENST00000484088 TAOK2Q9UL54 1235 aa6.3□□□□□ -1.4
ITGB1-213ENST00000484088 GPR153Q6NV75 609 aa6.29□□□□□ -1.4
ITGB1-213ENST00000484088 KHSRPQ92945 711 aaKnown RBP eCLIP6.28□□□□□ -1.44e-6■■□□□ 14.1
ITGB1-213ENST00000484088 KDM4FA0A1W2PPD8 638 aa6.27□□□□□ -1.41
ITGB1-213ENST00000484088 HOXB1P14653 301 aaPredicted RBP6.26□□□□□ -1.41
ITGB1-213ENST00000484088 CADPS2Q86UW7 1296 aa6.26□□□□□ -1.41
ITGB1-213ENST00000484088 KRTAP3-3Q9BYR6 98 aa6.26□□□□□ -1.41
ITGB1-213ENST00000484088 KRTAP3-2Q9BYR7 98 aa6.26□□□□□ -1.41
ITGB1-213ENST00000484088 NCKAP5LQ9HCH0 1330 aa6.25□□□□□ -1.41
ITGB1-213ENST00000484088 CDAN1Q8IWY9 1227 aa6.25□□□□□ -1.41
ITGB1-213ENST00000484088 SNPHO15079 494 aa6.23□□□□□ -1.41
ITGB1-213ENST00000484088 HS3ST6Q96QI5 342 aa6.23□□□□□ -1.41
ITGB1-213ENST00000484088 CRISPLD2Q9H0B8 497 aa6.23□□□□□ -1.41
ITGB1-213ENST00000484088 DSG2Q14126 1118 aa6.22□□□□□ -1.41
ITGB1-213ENST00000484088 ARSIQ5FYB1 569 aa6.22□□□□□ -1.41
ITGB1-213ENST00000484088 POTEEQ6S8J3 1075 aa6.21□□□□□ -1.42
ITGB1-213ENST00000484088 GPHNQ9NQX3 736 aaPredicted RBP6.21□□□□□ -1.42
ITGB1-213ENST00000484088 FAM205CA6NFA0 338 aa6.2□□□□□ -1.42
ITGB1-213ENST00000484088 G3V3G9 751 aa6.2□□□□□ -1.42
ITGB1-213ENST00000484088 SLC34A2O95436 690 aa6.2□□□□□ -1.42
ITGB1-213ENST00000484088 FOXK1P85037 733 aa6.2□□□□□ -1.42
ITGB1-213ENST00000484088 EMP3P54852 163 aa6.19□□□□□ -1.42
ITGB1-213ENST00000484088 DOK7Q18PE1 504 aa6.19□□□□□ -1.42
ITGB1-213ENST00000484088 PCDH10Q9P2E7 1040 aa6.18□□□□□ -1.42
ITGB1-213ENST00000484088 PLPP6Q8IY26 295 aa6.17□□□□□ -1.42
ITGB1-213ENST00000484088 ZSWIM6Q9HCJ5 1215 aa6.17□□□□□ -1.42
ITGB1-213ENST00000484088 PCDHGA4Q9Y5G9 962 aa6.17□□□□□ -1.42
ITGB1-213ENST00000484088 PTCD2Q8WV60 388 aaKnown RBP6.16□□□□□ -1.42
ITGB1-213ENST00000484088 NUDT7P0C024 238 aa6.15□□□□□ -1.42
ITGB1-213ENST00000484088 MFSD10Q14728 455 aa6.15□□□□□ -1.42
ITGB1-213ENST00000484088 SPNS2Q8IVW8 549 aa6.15□□□□□ -1.42
ITGB1-213ENST00000484088 VARS2Q5ST30 1063 aaKnown RBP6.14□□□□□ -1.43
ITGB1-213ENST00000484088 BBXQ8WY36 941 aaPredicted RBP6.14□□□□□ -1.43
ITGB1-213ENST00000484088 PLSCR2Q9NRY7 297 aa6.14□□□□□ -1.43
ITGB1-213ENST00000484088 DCAF8L2P0C7V8 631 aa6.13□□□□□ -1.43
ITGB1-213ENST00000484088 ZNF710Q8N1W2 664 aa6.13□□□□□ -1.43
ITGB1-213ENST00000484088 TMC2Q8TDI7 906 aa6.13□□□□□ -1.43
ITGB1-213ENST00000484088 OXER1Q8TDS5 423 aa6.13□□□□□ -1.43
ITGB1-213ENST00000484088 EMILIN3Q9NT22 766 aa6.13□□□□□ -1.43
ITGB1-213ENST00000484088 LHX6Q9UPM6 363 aa6.13□□□□□ -1.43
ITGB1-213ENST00000484088 ZNF316A6NFI3 1004 aaPredicted RBP6.12□□□□□ -1.43
ITGB1-213ENST00000484088 ERBB3P21860 1342 aa6.1□□□□□ -1.43
ITGB1-213ENST00000484088 PPP1R15BQ5SWA1 713 aa6.1□□□□□ -1.43
ITGB1-213ENST00000484088 ZNF687Q8N1G0 1237 aa6.1□□□□□ -1.43
ITGB1-213ENST00000484088 SLC24A1O60721 1099 aa6.09□□□□□ -1.43
ITGB1-213ENST00000484088 MMRN1Q13201 1228 aa6.09□□□□□ -1.43
ITGB1-213ENST00000484088 CAMK2BQ13554 666 aa6.08□□□□□ -1.44
ITGB1-213ENST00000484088 LARP6Q9BRS8 491 aaKnown RBP6.08□□□□□ -1.44
ITGB1-213ENST00000484088 RIMBP2O15034 1052 aa6.07□□□□□ -1.44
ITGB1-213ENST00000484088 UPF1Q92900 1129 aaKnown RBP eCLIP6.06□□□□□ -1.44
ITGB1-213ENST00000484088 ANO8Q9HCE9 1232 aaPredicted RBP6.06□□□□□ -1.44
ITGB1-213ENST00000484088 RYDENQ9NUL5 291 aaKnown RBP6.06□□□□□ -1.44
ITGB1-213ENST00000484088 AXIN2Q9Y2T1 843 aa6.06□□□□□ -1.44
ITGB1-213ENST00000484088 PDE4AP27815 886 aa6.05□□□□□ -1.44
ITGB1-213ENST00000484088 DDX27Q96GQ7 796 aaKnown RBP6.04□□□□□ -1.44
ITGB1-213ENST00000484088 DMRTA1Q5VZB9 504 aa6.03□□□□□ -1.44
ITGB1-213ENST00000484088 PAXIP1Q6ZW49 1069 aaPredicted RBP6.02□□□□□ -1.45
ITGB1-213ENST00000484088 SPRYD3Q8NCJ5 442 aa6.02□□□□□ -1.45
ITGB1-213ENST00000484088 PSEN2P49810 448 aa6.01□□□□□ -1.45
ITGB1-213ENST00000484088 TSHZ2Q9NRE2 1034 aa6.01□□□□□ -1.45
ITGB1-213ENST00000484088 PRIM1P49642 420 aaKnown RBP6□□□□□ -1.45
ITGB1-213ENST00000484088 FOSBP53539 338 aa6□□□□□ -1.45
ITGB1-213ENST00000484088 LSM11P83369 360 aaKnown RBP eCLIP6□□□□□ -1.45
ITGB1-213ENST00000484088 PLCB2Q00722 1185 aa6□□□□□ -1.45
ITGB1-213ENST00000484088 EVI5O60447 810 aa5.99□□□□□ -1.45
ITGB1-213ENST00000484088 CFAP44Q96MT7 982 aa5.99□□□□□ -1.45
ITGB1-213ENST00000484088 HRO43593 1189 aa5.98□□□□□ -1.45
ITGB1-213ENST00000484088 DPYSL4O14531 572 aa5.97□□□□□ -1.45
ITGB1-213ENST00000484088 ADAM33Q9BZ11 813 aa5.97□□□□□ -1.45
ITGB1-213ENST00000484088 PCDHGA10Q9Y5H3 936 aa5.97□□□□□ -1.45
ITGB1-213ENST00000484088 ARHGAP33O14559 1287 aa5.95□□□□□ -1.46
ITGB1-213ENST00000484088 ARIH1Q9Y4X5 557 aaPredicted RBP5.95□□□□□ -1.46
ITGB1-213ENST00000484088 COL9A1P20849 921 aa5.94□□□□□ -1.46
ITGB1-213ENST00000484088 PBX2P40425 430 aa5.94□□□□□ -1.46
ITGB1-213ENST00000484088 ANKRD13DQ6ZTN6 518 aa5.94□□□□□ -1.46
ITGB1-213ENST00000484088 ZNF454Q8N9F8 522 aa5.94□□□□□ -1.46
ITGB1-213ENST00000484088 JPH4Q96JJ6 628 aa5.94□□□□□ -1.46
ITGB1-213ENST00000484088 BCL2L12Q9HB09 334 aa5.94□□□□□ -1.46
ITGB1-213ENST00000484088 TBC1D12O60347 775 aa5.93□□□□□ -1.46
ITGB1-213ENST00000484088 PTGER2P43116 358 aa5.93□□□□□ -1.46
ITGB1-213ENST00000484088 ADGRD1Q6QNK2 874 aa5.93□□□□□ -1.46
ITGB1-213ENST00000484088 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.93□□□□□ -1.46
ITGB1-213ENST00000484088 BHMG1C9JSJ3 638 aaPredicted RBP5.92□□□□□ -1.46
ITGB1-213ENST00000484088 MAP3K9P80192 1104 aa5.92□□□□□ -1.46
ITGB1-213ENST00000484088 PSDA5PKW4 1024 aaPredicted RBP5.91□□□□□ -1.46
ITGB1-213ENST00000484088 PDIA6Q15084 440 aa5.91□□□□□ -1.46
ITGB1-213ENST00000484088 PPP4R3BQ5MIZ7 849 aa5.91□□□□□ -1.46
ITGB1-213ENST00000484088 KCNK17Q96T54 332 aa5.91□□□□□ -1.46
ITGB1-213ENST00000484088 ZBED2Q9BTP6 218 aa5.91□□□□□ -1.46
ITGB1-213ENST00000484088 VPS9D1Q9Y2B5 631 aa5.91□□□□□ -1.46
ITGB1-213ENST00000484088 C3orf80F5H4A9 247 aa5.9□□□□□ -1.46
ITGB1-213ENST00000484088 ZDHHC16Q969W1 377 aa5.9□□□□□ -1.46
ITGB1-213ENST00000484088 MYT1LQ9UL68 1186 aa5.9□□□□□ -1.46
ITGB1-213ENST00000484088 TK2O00142 265 aa5.89□□□□□ -1.47
ITGB1-213ENST00000484088 PHF14O94880 888 aa5.89□□□□□ -1.47
ITGB1-213ENST00000484088 E2F4Q16254 413 aa5.89□□□□□ -1.47
ITGB1-213ENST00000484088 RNF166Q96A37 237 aaPredicted RBP5.89□□□□□ -1.47
ITGB1-213ENST00000484088 PROX2Q3B8N5 592 aa5.88□□□□□ -1.47
ITGB1-213ENST00000484088 KCNV2Q8TDN2 545 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms