RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 STK25O00506 426 aa15.01□□□□□ -0.01
CLK1-212ENST00000482590 RGL2O15211 777 aa15.01□□□□□ -0.01
CLK1-212ENST00000482590 HOXB1P14653 301 aaPredicted RBP15□□□□□ -0.01
CLK1-212ENST00000482590 SPNS2Q8IVW8 549 aa14.99□□□□□ -0.01
CLK1-212ENST00000482590 MFRPQ9BY79 579 aa14.99□□□□□ -0.01
CLK1-212ENST00000482590 KRTAP3-3Q9BYR6 98 aa14.95□□□□□ -0.02
CLK1-212ENST00000482590 KRTAP3-2Q9BYR7 98 aa14.95□□□□□ -0.02
CLK1-212ENST00000482590 MMRN1Q13201 1228 aa14.93□□□□□ -0.02
CLK1-212ENST00000482590 RIMBP2O15034 1052 aa14.92□□□□□ -0.02
CLK1-212ENST00000482590 ERBB3P21860 1342 aa14.88□□□□□ -0.03
CLK1-212ENST00000482590 ZSWIM6Q9HCJ5 1215 aa14.87□□□□□ -0.03
CLK1-212ENST00000482590 GPR153Q6NV75 609 aa14.85□□□□□ -0.03
CLK1-212ENST00000482590 VARS2Q5ST30 1063 aaKnown RBP14.81□□□□□ -0.04
CLK1-212ENST00000482590 KIF3CO14782 793 aa14.8□□□□□ -0.04
CLK1-212ENST00000482590 C2orf72A6NCS6 295 aa14.77□□□□□ -0.05
CLK1-212ENST00000482590 ARSIQ5FYB1 569 aa14.77□□□□□ -0.05
CLK1-212ENST00000482590 PPP1R37O75864 691 aa14.74□□□□□ -0.05
CLK1-212ENST00000482590 KHSRPQ92945 711 aaKnown RBP eCLIP14.73□□□□□ -0.058e-10■■■□□ 19
CLK1-212ENST00000482590 ZNF687Q8N1G0 1237 aa14.7□□□□□ -0.06
CLK1-212ENST00000482590 HS6ST3Q8IZP7 471 aa14.68□□□□□ -0.06
CLK1-212ENST00000482590 TMC2Q8TDI7 906 aa14.66□□□□□ -0.06
CLK1-212ENST00000482590 ZNF316A6NFI3 1004 aaPredicted RBP14.64□□□□□ -0.07
CLK1-212ENST00000482590 SLC34A2O95436 690 aa14.61□□□□□ -0.07
CLK1-212ENST00000482590 CHGAP10645 457 aaKnown RBP14.6□□□□□ -0.07
CLK1-212ENST00000482590 NUDT7P0C024 238 aa14.59□□□□□ -0.07
CLK1-212ENST00000482590 PCDHGA4Q9Y5G9 962 aa14.59□□□□□ -0.07
CLK1-212ENST00000482590 NKX1-1Q15270 411 aaPredicted RBP14.52□□□□□ -0.09
CLK1-212ENST00000482590 LHX6Q9UPM6 363 aa14.52□□□□□ -0.09
CLK1-212ENST00000482590 DNAJC5Q9H3Z4 198 aa14.51□□□□□ -0.09
CLK1-212ENST00000482590 RNF166Q96A37 237 aaPredicted RBP14.49□□□□□ -0.09
CLK1-212ENST00000482590 FOXK1P85037 733 aa14.48□□□□□ -0.09
CLK1-212ENST00000482590 GPHNQ9NQX3 736 aaPredicted RBP14.48□□□□□ -0.09
CLK1-212ENST00000482590 MYT1LQ9UL68 1186 aa14.48□□□□□ -0.09
CLK1-212ENST00000482590 ANKRD13DQ6ZTN6 518 aa14.47□□□□□ -0.09
CLK1-212ENST00000482590 PLPP6Q8IY26 295 aa14.46□□□□□ -0.09
CLK1-212ENST00000482590 LSM11P83369 360 aaKnown RBP eCLIP14.45□□□□□ -0.1
CLK1-212ENST00000482590 PTCD2Q8WV60 388 aaKnown RBP14.45□□□□□ -0.1
CLK1-212ENST00000482590 KDM4FA0A1W2PPD8 638 aa14.44□□□□□ -0.1
CLK1-212ENST00000482590 DSG2Q14126 1118 aa14.44□□□□□ -0.1
CLK1-212ENST00000482590 POTEEQ6S8J3 1075 aa14.44□□□□□ -0.1
CLK1-212ENST00000482590 PBX2P40425 430 aa14.42□□□□□ -0.1
CLK1-212ENST00000482590 PTGER2P43116 358 aa14.41□□□□□ -0.1
CLK1-212ENST00000482590 AXIN2Q9Y2T1 843 aa14.4□□□□□ -0.1
CLK1-212ENST00000482590 RYDENQ9NUL5 291 aaKnown RBP14.37□□□□□ -0.11
CLK1-212ENST00000482590 PSDA5PKW4 1024 aaPredicted RBP14.34□□□□□ -0.11
CLK1-212ENST00000482590 CRISPLD2Q9H0B8 497 aa14.32□□□□□ -0.12
CLK1-212ENST00000482590 ARHGAP33O14559 1287 aa14.3□□□□□ -0.12
CLK1-212ENST00000482590 TBC1D12O60347 775 aa14.3□□□□□ -0.12
CLK1-212ENST00000482590 GTPBP6O43824 516 aaPredicted RBP14.28□□□□□ -0.12
CLK1-212ENST00000482590 OXER1Q8TDS5 423 aa14.27□□□□□ -0.13
CLK1-212ENST00000482590 NCKAP5LQ9HCH0 1330 aa14.26□□□□□ -0.13
CLK1-212ENST00000482590 PPP1R15BQ5SWA1 713 aa14.24□□□□□ -0.13
CLK1-212ENST00000482590 ADGRD1Q6QNK2 874 aa14.24□□□□□ -0.13
CLK1-212ENST00000482590 PSEN2P49810 448 aa14.23□□□□□ -0.13
CLK1-212ENST00000482590 PPP4R3BQ5MIZ7 849 aa14.23□□□□□ -0.13
CLK1-212ENST00000482590 UPF1Q92900 1129 aaKnown RBP eCLIP14.23□□□□□ -0.13
CLK1-212ENST00000482590 DMRTA1Q5VZB9 504 aa14.22□□□□□ -0.13
CLK1-212ENST00000482590 PDE4AP27815 886 aa14.21□□□□□ -0.13
CLK1-212ENST00000482590 DCAF8L2P0C7V8 631 aa14.19□□□□□ -0.14
CLK1-212ENST00000482590 TK2O00142 265 aa14.17□□□□□ -0.14
CLK1-212ENST00000482590 HRO43593 1189 aa14.15□□□□□ -0.14
CLK1-212ENST00000482590 LARP6Q9BRS8 491 aaKnown RBP14.14□□□□□ -0.15
CLK1-212ENST00000482590 KCNK17Q96T54 332 aa14.13□□□□□ -0.15
CLK1-212ENST00000482590 ZNF454Q8N9F8 522 aa14.12□□□□□ -0.15
CLK1-212ENST00000482590 DDX27Q96GQ7 796 aaKnown RBP14.11□□□□□ -0.15
CLK1-212ENST00000482590 MFSD10Q14728 455 aa14.09□□□□□ -0.15
CLK1-212ENST00000482590 FOSBP53539 338 aa14.08□□□□□ -0.16
CLK1-212ENST00000482590 ANO8Q9HCE9 1232 aaPredicted RBP14.08□□□□□ -0.16
CLK1-212ENST00000482590 BCL2L12Q9HB09 334 aa14.07□□□□□ -0.16
CLK1-212ENST00000482590 EVI5O60447 810 aa14.06□□□□□ -0.16
CLK1-212ENST00000482590 KCNH8Q96L42 1107 aa14.06□□□□□ -0.16
CLK1-212ENST00000482590 HCSTQ9UBK5 93 aa14.06□□□□□ -0.16
CLK1-212ENST00000482590 CCDC180Q9P1Z9 1646 aa14.05□□□□□ -0.16
CLK1-212ENST00000482590 CADPS2Q86UW7 1296 aa14.05□□□□□ -0.16
CLK1-212ENST00000482590 VPS9D1Q9Y2B5 631 aa14.04□□□□□ -0.16
CLK1-212ENST00000482590 JPH4Q96JJ6 628 aa14.02□□□□□ -0.17
CLK1-212ENST00000482590 EMILIN3Q9NT22 766 aa14.02□□□□□ -0.17
CLK1-212ENST00000482590 MAP3K9P80192 1104 aa14□□□□□ -0.17
CLK1-212ENST00000482590 KCTD12Q96CX2 325 aaKnown RBP13.99□□□□□ -0.17
CLK1-212ENST00000482590 PTPREP23469 700 aa13.98□□□□□ -0.17
CLK1-212ENST00000482590 STAC3Q96MF2 364 aa13.98□□□□□ -0.17
CLK1-212ENST00000482590 SLC4A5Q9BY07 1137 aa13.98□□□□□ -0.17
CLK1-212ENST00000482590 SLC24A1O60721 1099 aa13.97□□□□□ -0.17
CLK1-212ENST00000482590 ZDHHC16Q969W1 377 aa13.97□□□□□ -0.17
CLK1-212ENST00000482590 ADAM33Q9BZ11 813 aa13.97□□□□□ -0.17
CLK1-212ENST00000482590 PLA2G2EQ9NZK7 142 aa13.96□□□□□ -0.17
CLK1-212ENST00000482590 ZBED2Q9BTP6 218 aa13.94□□□□□ -0.18
CLK1-212ENST00000482590 ABCC9O60706 1549 aa13.92□□□□□ -0.18
CLK1-212ENST00000482590 BHMG1C9JSJ3 638 aaPredicted RBP13.92□□□□□ -0.18
CLK1-212ENST00000482590 PCDHGA10Q9Y5H3 936 aa13.9□□□□□ -0.18
CLK1-212ENST00000482590 BBXQ8WY36 941 aaPredicted RBP13.88□□□□□ -0.19
CLK1-212ENST00000482590 CAMK2BQ13554 666 aa13.87□□□□□ -0.19
CLK1-212ENST00000482590 PTPN5P54829 565 aa13.83□□□□□ -0.2
CLK1-212ENST00000482590 PHF14O94880 888 aa13.82□□□□□ -0.2
CLK1-212ENST00000482590 MRPL50Q8N5N7 158 aaKnown RBP13.82□□□□□ -0.2
CLK1-212ENST00000482590 PPP1R3GB7ZBB8 358 aa13.81□□□□□ -0.2
CLK1-212ENST00000482590 DPYSL4O14531 572 aa13.81□□□□□ -0.2
CLK1-212ENST00000482590 COL9A1P20849 921 aa13.81□□□□□ -0.2
CLK1-212ENST00000482590 TYW1BQ6NUM6 668 aa13.81□□□□□ -0.2
CLK1-212ENST00000482590 THSD4Q6ZMP0 1018 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms