RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 MLECQ14165 292 aa18.4■□□□□ 0.54
HDLBP-237ENST00000479169 PLCH2O75038 1416 aa18.4■□□□□ 0.54
HDLBP-237ENST00000479169 SCAPERQ9BY12 1400 aa18.4■□□□□ 0.54
HDLBP-237ENST00000479169 MAGI2Q86UL8 1455 aa18.39■□□□□ 0.54
HDLBP-237ENST00000479169 ATP1B4Q9UN42 357 aaPredicted RBP18.38■□□□□ 0.53
HDLBP-237ENST00000479169 KIF14Q15058 1648 aa18.38■□□□□ 0.53
HDLBP-237ENST00000479169 ARHGAP35Q9NRY4 1499 aa18.35■□□□□ 0.53
HDLBP-237ENST00000479169 UBTFP17480 764 aaKnown RBP18.35■□□□□ 0.53
HDLBP-237ENST00000479169 LRRIQ1Q96JM4 1722 aa18.35■□□□□ 0.53
HDLBP-237ENST00000479169 FMN1Q68DA7 1419 aa18.33■□□□□ 0.53
HDLBP-237ENST00000479169 ARHGEF12Q9NZN5 1544 aa18.33■□□□□ 0.52
HDLBP-237ENST00000479169 ATP10AO60312 1499 aa18.32■□□□□ 0.52
HDLBP-237ENST00000479169 C9orf84Q5VXU9 1444 aa18.32■□□□□ 0.52
HDLBP-237ENST00000479169 EFCAB2Q5VUJ9 269 aa18.31■□□□□ 0.52
HDLBP-237ENST00000479169 ARHGAP5Q13017 1502 aa18.29■□□□□ 0.52
HDLBP-237ENST00000479169 PREX1Q8TCU6 1659 aa18.28■□□□□ 0.52
HDLBP-237ENST00000479169 TROQ12816 1431 aaPredicted RBP18.28■□□□□ 0.52
HDLBP-237ENST00000479169 CDC42BPBQ9Y5S2 1711 aa18.27■□□□□ 0.52
HDLBP-237ENST00000479169 KDM5CP41229 1560 aa18.27■□□□□ 0.52
HDLBP-237ENST00000479169 ZNF518AQ6AHZ1 1483 aa18.26■□□□□ 0.51
HDLBP-237ENST00000479169 CDK11AQ9UQ88 783 aaPredicted RBP18.26■□□□□ 0.51
HDLBP-237ENST00000479169 CEBPAP49715 358 aaPredicted RBP18.25■□□□□ 0.51
HDLBP-237ENST00000479169 AFAP1Q8N556 730 aa18.24■□□□□ 0.51
HDLBP-237ENST00000479169 DIP2CQ9Y2E4 1556 aa18.24■□□□□ 0.51
HDLBP-237ENST00000479169 CLIP1P30622 1438 aa18.23■□□□□ 0.51
HDLBP-237ENST00000479169 ABCA6Q8N139 1617 aa18.23■□□□□ 0.51
HDLBP-237ENST00000479169 CERKQ8TCT0 537 aa18.22■□□□□ 0.51
HDLBP-237ENST00000479169 SETD1BQ9UPS6 1966 aaKnown RBP18.22■□□□□ 0.51
HDLBP-237ENST00000479169 STRCQ7RTU9 1775 aa18.22■□□□□ 0.51
HDLBP-237ENST00000479169 PREX2Q70Z35 1606 aa18.21■□□□□ 0.51
HDLBP-237ENST00000479169 MYT1LQ9UL68 1186 aa18.21■□□□□ 0.51
HDLBP-237ENST00000479169 ITSN2Q9NZM3 1697 aa18.19■□□□□ 0.5
HDLBP-237ENST00000479169 CHIC1Q5VXU3 224 aa18.19■□□□□ 0.5
HDLBP-237ENST00000479169 REREQ9P2R6 1566 aa18.19■□□□□ 0.5
HDLBP-237ENST00000479169 C3P01024 1663 aa18.18■□□□□ 0.5
HDLBP-237ENST00000479169 ABCC1P33527 1531 aa18.18■□□□□ 0.5
HDLBP-237ENST00000479169 TRAPPC8Q9Y2L5 1435 aa18.17■□□□□ 0.5
HDLBP-237ENST00000479169 CDC42BPAQ5VT25 1732 aa18.17■□□□□ 0.5
HDLBP-237ENST00000479169 UHRF1BP1Q6BDS2 1440 aa18.16■□□□□ 0.5
HDLBP-237ENST00000479169 MLH3Q9UHC1 1453 aa18.15■□□□□ 0.5
HDLBP-237ENST00000479169 KIDINS220Q9ULH0 1771 aa18.14■□□□□ 0.5
HDLBP-237ENST00000479169 CASKIN1Q8WXD9 1431 aa18.14■□□□□ 0.49
HDLBP-237ENST00000479169 CCDC18Q5T9S5 1454 aa18.14■□□□□ 0.49
HDLBP-237ENST00000479169 AGLP35573 1532 aa18.12■□□□□ 0.49
HDLBP-237ENST00000479169 SAMD9LQ8IVG5 1584 aa18.08■□□□□ 0.48
HDLBP-237ENST00000479169 DMRT2Q9Y5R5 561 aa18.07■□□□□ 0.48
HDLBP-237ENST00000479169 ESF1Q9H501 851 aaKnown RBP18.06■□□□□ 0.48
HDLBP-237ENST00000479169 FYCO1Q9BQS8 1478 aa18.06■□□□□ 0.48
HDLBP-237ENST00000479169 SYCP2Q9BX26 1530 aa18.05■□□□□ 0.48
HDLBP-237ENST00000479169 SUPT6HQ7KZ85 1726 aaKnown RBP18.05■□□□□ 0.48
HDLBP-237ENST00000479169 ZNF777Q9ULD5 760 aaPredicted RBP18.04■□□□□ 0.48
HDLBP-237ENST00000479169 PTPRTO14522 1441 aa18.03■□□□□ 0.48
HDLBP-237ENST00000479169 MROH2AA6NES4 1674 aa18.03■□□□□ 0.48
HDLBP-237ENST00000479169 CNTLNQ9NXG0 1405 aa18.02■□□□□ 0.48
HDLBP-237ENST00000479169 GPATCH8Q9UKJ3 1502 aaKnown RBP18.02■□□□□ 0.47
HDLBP-237ENST00000479169 NCOA1Q15788 1441 aa18■□□□□ 0.47
HDLBP-237ENST00000479169 LTBP4Q8N2S1 1624 aa18■□□□□ 0.47
HDLBP-237ENST00000479169 HNRNPMP52272 730 aaKnown RBP eCLIP17.99■□□□□ 0.474e-8■■■■■ 33.4
HDLBP-237ENST00000479169 CLTCQ00610 1675 aaKnown RBP17.99■□□□□ 0.47
HDLBP-237ENST00000479169 SPAG9O60271 1321 aaKnown RBP17.98■□□□□ 0.47
HDLBP-237ENST00000479169 ATP7AQ04656 1500 aa17.98■□□□□ 0.47
HDLBP-237ENST00000479169 INO80Q9ULG1 1556 aaPredicted RBP17.98■□□□□ 0.47
HDLBP-237ENST00000479169 CAMSAP1Q5T5Y3 1602 aa17.98■□□□□ 0.47
HDLBP-237ENST00000479169 PLXNC1O60486 1568 aa17.96■□□□□ 0.47
HDLBP-237ENST00000479169 DISP3Q9P2K9 1392 aa17.96■□□□□ 0.47
HDLBP-237ENST00000479169 NPATQ14207 1427 aa17.96■□□□□ 0.47
HDLBP-237ENST00000479169 ZMYM3Q14202 1370 aa17.95■□□□□ 0.46
HDLBP-237ENST00000479169 ILDR2Q71H61 639 aa17.94■□□□□ 0.46
HDLBP-237ENST00000479169 KIAA1107Q9UPP5 1409 aa17.93■□□□□ 0.46
HDLBP-237ENST00000479169 MYO3AQ8NEV4 1616 aa17.93■□□□□ 0.46
HDLBP-237ENST00000479169 A2MP01023 1474 aa17.93■□□□□ 0.46
HDLBP-237ENST00000479169 ZNF142P52746 1687 aaPredicted RBP17.93■□□□□ 0.46
HDLBP-237ENST00000479169 CFDP1Q9UEE9 299 aaPredicted RBP17.92■□□□□ 0.46
HDLBP-237ENST00000479169 PLEKHH2Q8IVE3 1493 aa17.92■□□□□ 0.46
HDLBP-237ENST00000479169 CCNB3Q8WWL7 1395 aa17.91■□□□□ 0.46
HDLBP-237ENST00000479169 NCKAP5LQ9HCH0 1330 aa17.91■□□□□ 0.46
HDLBP-237ENST00000479169 ADGBQ8N7X0 1667 aa17.9■□□□□ 0.46
HDLBP-237ENST00000479169 SPATA31D1Q6ZQQ2 1576 aa17.9■□□□□ 0.46
HDLBP-237ENST00000479169 MTUS2Q5JR59 1369 aa17.9■□□□□ 0.46
HDLBP-237ENST00000479169 IQSEC2Q5JU85 1478 aa17.89■□□□□ 0.45
HDLBP-237ENST00000479169 TIAM1Q13009 1591 aa17.89■□□□□ 0.45
HDLBP-237ENST00000479169 PTPRKQ15262 1439 aa17.89■□□□□ 0.45
HDLBP-237ENST00000479169 CEP170BQ9Y4F5 1589 aaPredicted RBP17.88■□□□□ 0.45
HDLBP-237ENST00000479169 GGT6Q6P531 493 aa17.88■□□□□ 0.45
HDLBP-237ENST00000479169 ZNF644Q9H582 1327 aaPredicted RBP17.87■□□□□ 0.45
HDLBP-237ENST00000479169 ZNF335Q9H4Z2 1342 aaPredicted RBP17.86■□□□□ 0.45
HDLBP-237ENST00000479169 EHBP1L1Q8N3D4 1523 aa17.84■□□□□ 0.45
HDLBP-237ENST00000479169 PLA2R1Q13018 1463 aa17.84■□□□□ 0.45
HDLBP-237ENST00000479169 TCOF1Q13428 1488 aaKnown RBP17.83■□□□□ 0.45
HDLBP-237ENST00000479169 MBD5Q9P267 1494 aa17.83■□□□□ 0.45
HDLBP-237ENST00000479169 SOCS7O14512 581 aa17.81■□□□□ 0.44
HDLBP-237ENST00000479169 PKD2Q13563 968 aa17.8■□□□□ 0.44
HDLBP-237ENST00000479169 DNMT1P26358 1616 aaKnown RBP17.8■□□□□ 0.44
HDLBP-237ENST00000479169 A2ML1A8K2U0 1454 aa17.78■□□□□ 0.44
HDLBP-237ENST00000479169 UBAP1LF5GYI3 381 aa17.78■□□□□ 0.44
HDLBP-237ENST00000479169 CEP162Q5TB80 1403 aa17.78■□□□□ 0.44
HDLBP-237ENST00000479169 POLR1AO95602 1720 aaPredicted RBP17.78■□□□□ 0.44
HDLBP-237ENST00000479169 PPP6R1Q9UPN7 881 aa17.77■□□□□ 0.44
HDLBP-237ENST00000479169 RTEL1-TNFRSF6BF6WH68 1400 aa17.77■□□□□ 0.44
HDLBP-237ENST00000479169 DHX29Q7Z478 1369 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms