RNA–Protein interactions for RNA: ENST00000478576.5

GFM1-208, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2 BASIC

Gene GFM1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-208ENST00000478576 SYNJ2O15056 1496 aa22.96■■□□□ 1.27
GFM1-208ENST00000478576 TROQ12816 1431 aaPredicted RBP22.94■■□□□ 1.26
GFM1-208ENST00000478576 ADGBQ8N7X0 1667 aa22.91■■□□□ 1.26
GFM1-208ENST00000478576 ARID3CA6NKF2 412 aa22.91■■□□□ 1.26
GFM1-208ENST00000478576 ANKRD30BQ9BXX2 1392 aa22.9■■□□□ 1.26
GFM1-208ENST00000478576 RPRD2Q5VT52 1461 aaKnown RBP22.9■■□□□ 1.26
GFM1-208ENST00000478576 ERCC6Q03468 1493 aa22.89■■□□□ 1.25
GFM1-208ENST00000478576 NUP160Q12769 1436 aa22.89■■□□□ 1.25
GFM1-208ENST00000478576 CROCC2H7BZ55 1655 aa22.87■■□□□ 1.25
GFM1-208ENST00000478576 CAMSAP2Q08AD1 1489 aa22.87■■□□□ 1.25
GFM1-208ENST00000478576 HSPA5P11021 654 aaKnown RBP22.85■■□□□ 1.25
GFM1-208ENST00000478576 PRG4Q92954 1404 aaPredicted RBP22.85■■□□□ 1.25
GFM1-208ENST00000478576 TEX14Q8IWB6 1497 aa22.85■■□□□ 1.25
GFM1-208ENST00000478576 ZNF644Q9H582 1327 aaPredicted RBP22.85■■□□□ 1.25
GFM1-208ENST00000478576 GPATCH8Q9UKJ3 1502 aaKnown RBP22.84■■□□□ 1.25
GFM1-208ENST00000478576 ADGRL2O95490 1459 aa22.84■■□□□ 1.25
GFM1-208ENST00000478576 PLB1Q6P1J6 1458 aa22.84■■□□□ 1.25
GFM1-208ENST00000478576 CARMIL2Q6F5E8 1435 aa22.84■■□□□ 1.25
GFM1-208ENST00000478576 L3MBTL2Q969R5 705 aa22.84■■□□□ 1.25
GFM1-208ENST00000478576 EIF4G2P78344 907 aaKnown RBP eCLIP22.83■■□□□ 1.25
GFM1-208ENST00000478576 WASHC2AQ641Q2 1341 aa22.83■■□□□ 1.25
GFM1-208ENST00000478576 KIF14Q15058 1648 aa22.83■■□□□ 1.24
GFM1-208ENST00000478576 CHMP7Q8WUX9 453 aaPredicted RBP22.82■■□□□ 1.24
GFM1-208ENST00000478576 POLR1AO95602 1720 aaPredicted RBP22.81■■□□□ 1.24
GFM1-208ENST00000478576 NCOA1Q15788 1441 aa22.8■■□□□ 1.24
GFM1-208ENST00000478576 PZPP20742 1482 aa22.79■■□□□ 1.24
GFM1-208ENST00000478576 ABCA8O94911 1581 aa22.78■■□□□ 1.24
GFM1-208ENST00000478576 CFDP1Q9UEE9 299 aaPredicted RBP22.77■■□□□ 1.24
GFM1-208ENST00000478576 FOXD1Q16676 465 aa22.76■■□□□ 1.23
GFM1-208ENST00000478576 CNTLNQ9NXG0 1405 aa22.76■■□□□ 1.23
GFM1-208ENST00000478576 CDC42BPAQ5VT25 1732 aa22.75■■□□□ 1.23
GFM1-208ENST00000478576 JPH4Q96JJ6 628 aa22.75■■□□□ 1.23
GFM1-208ENST00000478576 SLC4A1APQ9BWU0 796 aaKnown RBP22.74■■□□□ 1.23
GFM1-208ENST00000478576 SPATA31E1Q6ZUB1 1445 aa22.72■■□□□ 1.23
GFM1-208ENST00000478576 ABCC10Q5T3U5 1492 aa22.71■■□□□ 1.23
GFM1-208ENST00000478576 CCDC7Q96M83 1385 aa22.71■■□□□ 1.23
GFM1-208ENST00000478576 SHANK2Q9UPX8 1470 aa22.71■■□□□ 1.23
GFM1-208ENST00000478576 NBPF8Q3BBV2 869 aa22.7■■□□□ 1.23
GFM1-208ENST00000478576 MBD5Q9P267 1494 aa22.7■■□□□ 1.22
GFM1-208ENST00000478576 FKBP8Q14318 412 aa22.69■■□□□ 1.22
GFM1-208ENST00000478576 ANKRD30AQ9BXX3 1397 aa22.69■■□□□ 1.22
GFM1-208ENST00000478576 KIAA1107Q9UPP5 1409 aa22.69■■□□□ 1.22
GFM1-208ENST00000478576 MYT1Q01538 1121 aa22.68■■□□□ 1.22
GFM1-208ENST00000478576 ATP10BO94823 1461 aa22.66■■□□□ 1.22
GFM1-208ENST00000478576 NEFLP07196 543 aa22.66■■□□□ 1.22
GFM1-208ENST00000478576 TSHZ2Q9NRE2 1034 aa22.66■■□□□ 1.22
GFM1-208ENST00000478576 C11orf95C9JLR9 678 aaPredicted RBP22.64■■□□□ 1.21
GFM1-208ENST00000478576 FBLN2P98095 1184 aa22.64■■□□□ 1.21
GFM1-208ENST00000478576 PLEKHD1A6NEE1 506 aa22.63■■□□□ 1.21
GFM1-208ENST00000478576 KDM5DQ9BY66 1539 aa22.62■■□□□ 1.21
GFM1-208ENST00000478576 ANKRD50Q9ULJ7 1429 aa22.62■■□□□ 1.21
GFM1-208ENST00000478576 ARHGEF5Q12774 1597 aa22.61■■□□□ 1.21
GFM1-208ENST00000478576 ZNF777Q9ULD5 760 aaPredicted RBP22.59■■□□□ 1.21
GFM1-208ENST00000478576 C9orf84Q5VXU9 1444 aa22.58■■□□□ 1.21
GFM1-208ENST00000478576 PRKRIP1Q9H875 184 aaPredicted RBP22.58■■□□□ 1.2
GFM1-208ENST00000478576 KIF7Q2M1P5 1343 aa22.56■■□□□ 1.2
GFM1-208ENST00000478576 HNRNPUQ00839 825 aaKnown RBP eCLIP22.56■■□□□ 1.2
GFM1-208ENST00000478576 BCANQ96GW7 911 aa22.55■■□□□ 1.2
GFM1-208ENST00000478576 UHRF1BP1Q6BDS2 1440 aa22.55■■□□□ 1.2
GFM1-208ENST00000478576 PKD2Q13563 968 aa22.54■■□□□ 1.2
GFM1-208ENST00000478576 ARHGEF12Q9NZN5 1544 aa22.53■■□□□ 1.2
GFM1-208ENST00000478576 KDM5CP41229 1560 aa22.53■■□□□ 1.2
GFM1-208ENST00000478576 PTPRGP23470 1445 aa22.52■■□□□ 1.2
GFM1-208ENST00000478576 PREX2Q70Z35 1606 aa22.52■■□□□ 1.2
GFM1-208ENST00000478576 CDC42BPBQ9Y5S2 1711 aa22.51■■□□□ 1.19
GFM1-208ENST00000478576 BCORL1Q5H9F3 1711 aa22.51■■□□□ 1.19
GFM1-208ENST00000478576 RALGAPBQ86X10 1494 aa22.49■■□□□ 1.19
GFM1-208ENST00000478576 ARID4BQ4LE39 1312 aaPredicted RBP22.49■■□□□ 1.19
GFM1-208ENST00000478576 SAMD9LQ8IVG5 1584 aa22.48■■□□□ 1.19
GFM1-208ENST00000478576 NUP155O75694 1391 aa22.48■■□□□ 1.19
GFM1-208ENST00000478576 CCDC184Q52MB2 194 aa22.48■■□□□ 1.19
GFM1-208ENST00000478576 USP47Q96K76 1375 aa22.47■■□□□ 1.19
GFM1-208ENST00000478576 TSPY4P0CV99 314 aa22.46■■□□□ 1.19
GFM1-208ENST00000478576 TSPY10P0CW01 314 aa22.46■■□□□ 1.19
GFM1-208ENST00000478576 SHROOM2Q13796 1616 aa22.46■■□□□ 1.19
GFM1-208ENST00000478576 CHD1O14646 1710 aa22.45■■□□□ 1.18
GFM1-208ENST00000478576 CCDC141Q6ZP82 1450 aa22.45■■□□□ 1.18
GFM1-208ENST00000478576 KIF15Q9NS87 1388 aa22.44■■□□□ 1.18
GFM1-208ENST00000478576 RSPH4AQ5TD94 716 aa22.43■■□□□ 1.18
GFM1-208ENST00000478576 DHX29Q7Z478 1369 aaKnown RBP22.43■■□□□ 1.18
GFM1-208ENST00000478576 MAST1Q9Y2H9 1570 aa22.43■■□□□ 1.18
GFM1-208ENST00000478576 MRS2Q9HD23 443 aa22.42■■□□□ 1.18
GFM1-208ENST00000478576 ERICH6BQ5W0A0 696 aa22.41■■□□□ 1.18
GFM1-208ENST00000478576 ZBED9Q6R2W3 1325 aa22.4■■□□□ 1.18
GFM1-208ENST00000478576 HNRNPMP52272 730 aaKnown RBP eCLIP22.38■■□□□ 1.17
GFM1-208ENST00000478576 ROCK2O75116 1388 aaKnown RBP22.38■■□□□ 1.17
GFM1-208ENST00000478576 FAM135AQ9P2D6 1515 aa22.37■■□□□ 1.17
GFM1-208ENST00000478576 UNC13BO14795 1591 aa22.37■■□□□ 1.17
GFM1-208ENST00000478576 TTC37Q6PGP7 1564 aa22.34■■□□□ 1.17
GFM1-208ENST00000478576 FAM9BQ8IZU0 186 aa22.34■■□□□ 1.17
GFM1-208ENST00000478576 PLXNC1O60486 1568 aa22.33■■□□□ 1.17
GFM1-208ENST00000478576 MYO5CQ9NQX4 1742 aa22.33■■□□□ 1.17
GFM1-208ENST00000478576 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.33■■□□□ 1.16
GFM1-208ENST00000478576 SYCP2Q9BX26 1530 aa22.32■■□□□ 1.16
GFM1-208ENST00000478576 ZNF326Q5BKZ1 582 aaKnown RBP22.31■■□□□ 1.16
GFM1-208ENST00000478576 ABCC2Q92887 1545 aa22.31■■□□□ 1.16
GFM1-208ENST00000478576 E9PCH4 1651 aa22.3■■□□□ 1.16
GFM1-208ENST00000478576 PLEKHH2Q8IVE3 1493 aa22.3■■□□□ 1.16
GFM1-208ENST00000478576 ARHGAP5Q13017 1502 aa22.29■■□□□ 1.16
GFM1-208ENST00000478576 TRPM1Q7Z4N2 1603 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms