RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 ARID3CA6NKF2 412 aa29.44■■■□□ 2.3
TMED4-204ENST00000477639 RAPGEF6Q8TEU7 1601 aa29.42■■■□□ 2.3
TMED4-204ENST00000477639 KDM5BQ9UGL1 1544 aa29.41■■■□□ 2.3
TMED4-204ENST00000477639 DENND4BO75064 1496 aaPredicted RBP29.4■■■□□ 2.3
TMED4-204ENST00000477639 KDM6BO15054 1643 aa29.4■■■□□ 2.3
TMED4-204ENST00000477639 PTPRGP23470 1445 aa29.37■■■□□ 2.29
TMED4-204ENST00000477639 KCNH8Q96L42 1107 aa29.35■■■□□ 2.29
TMED4-204ENST00000477639 HIRIP3Q9BW71 556 aaPredicted RBP29.35■■■□□ 2.29
TMED4-204ENST00000477639 TRHP20396 242 aaPredicted RBP29.33■■■□□ 2.29
TMED4-204ENST00000477639 ROCK1Q13464 1354 aa29.32■■■□□ 2.28
TMED4-204ENST00000477639 DAPK1P53355 1430 aa29.32■■■□□ 2.28
TMED4-204ENST00000477639 TRIM52Q96A61 297 aa29.3■■■□□ 2.28
TMED4-204ENST00000477639 CDK11AQ9UQ88 783 aaPredicted RBP29.3■■■□□ 2.28
TMED4-204ENST00000477639 DNMT1P26358 1616 aaKnown RBP29.29■■■□□ 2.28
TMED4-204ENST00000477639 ABCC5O15440 1437 aa29.29■■■□□ 2.28
TMED4-204ENST00000477639 ADCY10Q96PN6 1610 aa29.27■■■□□ 2.28
TMED4-204ENST00000477639 MPHOSPH9Q99550 1183 aa29.26■■■□□ 2.28
TMED4-204ENST00000477639 TROQ12816 1431 aaPredicted RBP29.24■■■□□ 2.27
TMED4-204ENST00000477639 ZNF644Q9H582 1327 aaPredicted RBP29.23■■■□□ 2.27
TMED4-204ENST00000477639 NPM1P06748 294 aaKnown RBP eCLIP29.21■■■□□ 2.27
TMED4-204ENST00000477639 PLB1Q6P1J6 1458 aa29.21■■■□□ 2.27
TMED4-204ENST00000477639 CCER2I3L3R5 266 aa29.19■■■□□ 2.26
TMED4-204ENST00000477639 ANP32CO43423 234 aa29.14■■■□□ 2.26
TMED4-204ENST00000477639 GPATCH8Q9UKJ3 1502 aaKnown RBP29.13■■■□□ 2.25
TMED4-204ENST00000477639 CAMSAP2Q08AD1 1489 aa29.12■■■□□ 2.25
TMED4-204ENST00000477639 ITSN2Q9NZM3 1697 aa29.12■■■□□ 2.25
TMED4-204ENST00000477639 SUPT16HQ9Y5B9 1047 aaKnown RBP29.12■■■□□ 2.25
TMED4-204ENST00000477639 ANKRD30BQ9BXX2 1392 aa29.11■■■□□ 2.25
TMED4-204ENST00000477639 ABCC2Q92887 1545 aa29.09■■■□□ 2.25
TMED4-204ENST00000477639 KIF14Q15058 1648 aa29.09■■■□□ 2.25
TMED4-204ENST00000477639 CFDP1Q9UEE9 299 aaPredicted RBP29.09■■■□□ 2.25
TMED4-204ENST00000477639 FOXD1Q16676 465 aa29.08■■■□□ 2.25
TMED4-204ENST00000477639 UHRF1BP1LA0JNW5 1464 aa29.07■■■□□ 2.24
TMED4-204ENST00000477639 L3MBTL2Q969R5 705 aa29.07■■■□□ 2.24
TMED4-204ENST00000477639 HSPA5P11021 654 aaKnown RBP29.06■■■□□ 2.24
TMED4-204ENST00000477639 ABCA8O94911 1581 aa29.06■■■□□ 2.24
TMED4-204ENST00000477639 RPRD2Q5VT52 1461 aaKnown RBP29.05■■■□□ 2.24
TMED4-204ENST00000477639 NCOA1Q15788 1441 aa29.03■■■□□ 2.24
TMED4-204ENST00000477639 ADGBQ8N7X0 1667 aa29.02■■■□□ 2.24
TMED4-204ENST00000477639 ADGRL2O95490 1459 aa29.02■■■□□ 2.24
TMED4-204ENST00000477639 PZPP20742 1482 aa28.99■■■□□ 2.23
TMED4-204ENST00000477639 CROCC2H7BZ55 1655 aa28.99■■■□□ 2.23
TMED4-204ENST00000477639 SLC4A1APQ9BWU0 796 aaKnown RBP28.99■■■□□ 2.23
TMED4-204ENST00000477639 EIF4G2P78344 907 aaKnown RBP eCLIP28.98■■■□□ 2.23
TMED4-204ENST00000477639 WASHC2AQ641Q2 1341 aa28.98■■■□□ 2.23
TMED4-204ENST00000477639 TEX14Q8IWB6 1497 aa28.98■■■□□ 2.23
TMED4-204ENST00000477639 ATP10BO94823 1461 aa28.97■■■□□ 2.23
TMED4-204ENST00000477639 KIF13AQ9H1H9 1805 aa28.96■■■□□ 2.23
TMED4-204ENST00000477639 ZCCHC11Q5TAX3 1644 aaKnown RBP28.96■■■□□ 2.23
TMED4-204ENST00000477639 ABCC10Q5T3U5 1492 aa28.95■■■□□ 2.23
TMED4-204ENST00000477639 PLEKHD1A6NEE1 506 aa28.93■■■□□ 2.22
TMED4-204ENST00000477639 FAM69CQ0P6D2 419 aa28.93■■■□□ 2.22
TMED4-204ENST00000477639 ZNF777Q9ULD5 760 aaPredicted RBP28.93■■■□□ 2.22
TMED4-204ENST00000477639 ASXL2Q76L83 1435 aa28.93■■■□□ 2.22
TMED4-204ENST00000477639 NBPF8Q3BBV2 869 aa28.91■■■□□ 2.22
TMED4-204ENST00000477639 CDC42BPAQ5VT25 1732 aa28.9■■■□□ 2.22
TMED4-204ENST00000477639 ANKRD30AQ9BXX3 1397 aa28.9■■■□□ 2.22
TMED4-204ENST00000477639 DIP2BQ9P265 1576 aa28.89■■■□□ 2.22
TMED4-204ENST00000477639 KIAA1107Q9UPP5 1409 aa28.85■■■□□ 2.21
TMED4-204ENST00000477639 SHANK2Q9UPX8 1470 aa28.84■■■□□ 2.21
TMED4-204ENST00000477639 C11orf95C9JLR9 678 aaPredicted RBP28.81■■■□□ 2.2
TMED4-204ENST00000477639 CNTLNQ9NXG0 1405 aa28.81■■■□□ 2.2
TMED4-204ENST00000477639 ANKRD50Q9ULJ7 1429 aa28.81■■■□□ 2.2
TMED4-204ENST00000477639 SPATA31E1Q6ZUB1 1445 aa28.81■■■□□ 2.2
TMED4-204ENST00000477639 CCDC7Q96M83 1385 aa28.81■■■□□ 2.2
TMED4-204ENST00000477639 C9orf84Q5VXU9 1444 aa28.78■■■□□ 2.2
TMED4-204ENST00000477639 MBD5Q9P267 1494 aa28.78■■■□□ 2.2
TMED4-204ENST00000477639 WDR7Q9Y4E6 1490 aa28.76■■■□□ 2.19
TMED4-204ENST00000477639 TSPOAP1O95153 1857 aa28.76■■■□□ 2.19
TMED4-204ENST00000477639 PKD2Q13563 968 aa28.75■■■□□ 2.19
TMED4-204ENST00000477639 ARHGEF5Q12774 1597 aa28.73■■■□□ 2.19
TMED4-204ENST00000477639 KDM5DQ9BY66 1539 aa28.7■■■□□ 2.18
TMED4-204ENST00000477639 GLI2P10070 1586 aa28.69■■■□□ 2.18
TMED4-204ENST00000477639 TSPY4P0CV99 314 aa28.68■■■□□ 2.18
TMED4-204ENST00000477639 TSPY10P0CW01 314 aa28.68■■■□□ 2.18
TMED4-204ENST00000477639 FKBP8Q14318 412 aa28.68■■■□□ 2.18
TMED4-204ENST00000477639 POLR1AO95602 1720 aaPredicted RBP28.68■■■□□ 2.18
TMED4-204ENST00000477639 NUP155O75694 1391 aa28.67■■■□□ 2.18
TMED4-204ENST00000477639 HNRNPMP52272 730 aaKnown RBP eCLIP28.66■■■□□ 2.18
TMED4-204ENST00000477639 KIF7Q2M1P5 1343 aa28.66■■■□□ 2.18
TMED4-204ENST00000477639 PREX2Q70Z35 1606 aa28.63■■■□□ 2.17
TMED4-204ENST00000477639 SAMD9LQ8IVG5 1584 aa28.63■■■□□ 2.17
TMED4-204ENST00000477639 KIF15Q9NS87 1388 aa28.63■■■□□ 2.17
TMED4-204ENST00000477639 CDC42BPBQ9Y5S2 1711 aa28.62■■■□□ 2.17
TMED4-204ENST00000477639 PRKRIP1Q9H875 184 aaPredicted RBP28.62■■■□□ 2.17
TMED4-204ENST00000477639 CCDC141Q6ZP82 1450 aa28.6■■■□□ 2.17
TMED4-204ENST00000477639 MAP3K4Q9Y6R4 1608 aa28.6■■■□□ 2.17
TMED4-204ENST00000477639 UHRF1BP1Q6BDS2 1440 aa28.6■■■□□ 2.17
TMED4-204ENST00000477639 HNRNPUQ00839 825 aaKnown RBP eCLIP28.58■■■□□ 2.17
TMED4-204ENST00000477639 NEFLP07196 543 aa28.57■■■□□ 2.16
TMED4-204ENST00000477639 CCDC184Q52MB2 194 aa28.57■■■□□ 2.16
TMED4-204ENST00000477639 RSPH4AQ5TD94 716 aa28.57■■■□□ 2.16
TMED4-204ENST00000477639 PPRC1Q5VV67 1664 aaKnown RBP28.57■■■□□ 2.16
TMED4-204ENST00000477639 BCANQ96GW7 911 aa28.55■■■□□ 2.16
TMED4-204ENST00000477639 USP47Q96K76 1375 aa28.54■■■□□ 2.16
TMED4-204ENST00000477639 ARHGEF12Q9NZN5 1544 aa28.54■■■□□ 2.16
TMED4-204ENST00000477639 KDM5CP41229 1560 aa28.52■■■□□ 2.16
TMED4-204ENST00000477639 TSHZ2Q9NRE2 1034 aa28.52■■■□□ 2.16
TMED4-204ENST00000477639 CD109Q6YHK3 1445 aa28.52■■■□□ 2.16
TMED4-204ENST00000477639 BCORL1Q5H9F3 1711 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 217.8 ms