RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 ZEB1P37275 1124 aaPredicted RBP17.58■□□□□ 0.41
TNRC6A-206ENST00000477487 MIA2Q96PC5 1412 aa17.57■□□□□ 0.4
TNRC6A-206ENST00000477487 TTC37Q6PGP7 1564 aa17.57■□□□□ 0.4
TNRC6A-206ENST00000477487 PHF23Q9BUL5 403 aaPredicted RBP17.57■□□□□ 0.4
TNRC6A-206ENST00000477487 KDM6BO15054 1643 aa17.56■□□□□ 0.4
TNRC6A-206ENST00000477487 CAMSAP2Q08AD1 1489 aa17.56■□□□□ 0.4
TNRC6A-206ENST00000477487 ABCC5O15440 1437 aa17.55■□□□□ 0.4
TNRC6A-206ENST00000477487 KDM5BQ9UGL1 1544 aa17.55■□□□□ 0.4
TNRC6A-206ENST00000477487 NCBP3Q53F19 620 aaKnown RBP17.55■□□□□ 0.4
TNRC6A-206ENST00000477487 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.54■□□□□ 0.4
TNRC6A-206ENST00000477487 NAIPQ13075 1403 aa17.54■□□□□ 0.4
TNRC6A-206ENST00000477487 UHRF1BP1LA0JNW5 1464 aa17.53■□□□□ 0.4
TNRC6A-206ENST00000477487 DAPK1P53355 1430 aa17.53■□□□□ 0.4
TNRC6A-206ENST00000477487 HNRNPMP52272 730 aaKnown RBP eCLIP17.53■□□□□ 0.4
TNRC6A-206ENST00000477487 CDC42BPBQ9Y5S2 1711 aa17.52■□□□□ 0.4
TNRC6A-206ENST00000477487 ITSN2Q9NZM3 1697 aa17.51■□□□□ 0.39
TNRC6A-206ENST00000477487 HFM1A2PYH4 1435 aa17.5■□□□□ 0.39
TNRC6A-206ENST00000477487 CYB5RLQ6IPT4 315 aa17.49■□□□□ 0.39
TNRC6A-206ENST00000477487 DNMT1P26358 1616 aaKnown RBP17.49■□□□□ 0.39
TNRC6A-206ENST00000477487 MAPKBP1O60336 1514 aa17.49■□□□□ 0.39
TNRC6A-206ENST00000477487 SIN3AQ96ST3 1273 aa17.47■□□□□ 0.39
TNRC6A-206ENST00000477487 KCNA4P22459 653 aa17.47■□□□□ 0.39
TNRC6A-206ENST00000477487 SAMD9LQ8IVG5 1584 aa17.46■□□□□ 0.39
TNRC6A-206ENST00000477487 PREX2Q70Z35 1606 aa17.45■□□□□ 0.38
TNRC6A-206ENST00000477487 ARHGAP5Q13017 1502 aa17.44■□□□□ 0.38
TNRC6A-206ENST00000477487 ASXL2Q76L83 1435 aa17.43■□□□□ 0.38
TNRC6A-206ENST00000477487 RIMBP3CA6NJZ7 1639 aa17.42■□□□□ 0.38
TNRC6A-206ENST00000477487 RIMBP3BA6NNM3 1639 aa17.42■□□□□ 0.38
TNRC6A-206ENST00000477487 RIMBP3Q9UFD9 1639 aa17.42■□□□□ 0.38
TNRC6A-206ENST00000477487 NEUROD1Q13562 356 aa17.41■□□□□ 0.38
TNRC6A-206ENST00000477487 WDR7Q9Y4E6 1490 aa17.41■□□□□ 0.38
TNRC6A-206ENST00000477487 AKNAQ7Z591 1439 aa17.41■□□□□ 0.38
TNRC6A-206ENST00000477487 FOXD1Q16676 465 aa17.41■□□□□ 0.38
TNRC6A-206ENST00000477487 ARHGEF12Q9NZN5 1544 aa17.4■□□□□ 0.38
TNRC6A-206ENST00000477487 MBD5Q9P267 1494 aa17.4■□□□□ 0.38
TNRC6A-206ENST00000477487 MYO5CQ9NQX4 1742 aa17.4■□□□□ 0.38
TNRC6A-206ENST00000477487 GCC2Q8IWJ2 1684 aa17.4■□□□□ 0.38
TNRC6A-206ENST00000477487 TRIM52Q96A61 297 aa17.4■□□□□ 0.38
TNRC6A-206ENST00000477487 SYCP2Q9BX26 1530 aa17.4■□□□□ 0.38
TNRC6A-206ENST00000477487 CROCC2H7BZ55 1655 aa17.38■□□□□ 0.37
TNRC6A-206ENST00000477487 DENND4BO75064 1496 aaPredicted RBP17.38■□□□□ 0.37
TNRC6A-206ENST00000477487 NCOA1Q15788 1441 aa17.37■□□□□ 0.37
TNRC6A-206ENST00000477487 AMER1Q5JTC6 1135 aaPredicted RBP17.36■□□□□ 0.37
TNRC6A-206ENST00000477487 PLCH2O75038 1416 aa17.35■□□□□ 0.37
TNRC6A-206ENST00000477487 NPM1P06748 294 aaKnown RBP eCLIP17.35■□□□□ 0.37
TNRC6A-206ENST00000477487 C9orf84Q5VXU9 1444 aa17.35■□□□□ 0.37
TNRC6A-206ENST00000477487 ROCK1Q13464 1354 aa17.33■□□□□ 0.37
TNRC6A-206ENST00000477487 TRAPPC8Q9Y2L5 1435 aa17.32■□□□□ 0.36
TNRC6A-206ENST00000477487 AFAP1Q8N556 730 aa17.32■□□□□ 0.36
TNRC6A-206ENST00000477487 ADGBQ8N7X0 1667 aa17.31■□□□□ 0.36
TNRC6A-206ENST00000477487 TSPY4P0CV99 314 aa17.31■□□□□ 0.36
TNRC6A-206ENST00000477487 TSPY10P0CW01 314 aa17.31■□□□□ 0.36
TNRC6A-206ENST00000477487 EFCAB2Q5VUJ9 269 aa17.3■□□□□ 0.36
TNRC6A-206ENST00000477487 CCDC141Q6ZP82 1450 aa17.29■□□□□ 0.36
TNRC6A-206ENST00000477487 ADGRL2O95490 1459 aa17.29■□□□□ 0.36
TNRC6A-206ENST00000477487 CLSPNQ9HAW4 1339 aa17.28■□□□□ 0.36
TNRC6A-206ENST00000477487 MPHOSPH9Q99550 1183 aa17.28■□□□□ 0.36
TNRC6A-206ENST00000477487 ANKRD30AQ9BXX3 1397 aa17.28■□□□□ 0.36
TNRC6A-206ENST00000477487 ABCA9Q8IUA7 1624 aa17.28■□□□□ 0.36
TNRC6A-206ENST00000477487 ARHGEF5Q12774 1597 aa17.28■□□□□ 0.36
TNRC6A-206ENST00000477487 KIF15Q9NS87 1388 aa17.27■□□□□ 0.35
TNRC6A-206ENST00000477487 ABCC1P33527 1531 aa17.26■□□□□ 0.35
TNRC6A-206ENST00000477487 FANCAO15360 1455 aa17.26■□□□□ 0.35
TNRC6A-206ENST00000477487 ANKRD50Q9ULJ7 1429 aa17.26■□□□□ 0.35
TNRC6A-206ENST00000477487 SHANK2Q9UPX8 1470 aa17.24■□□□□ 0.35
TNRC6A-206ENST00000477487 SLC4A1APQ9BWU0 796 aaKnown RBP17.22■□□□□ 0.35
TNRC6A-206ENST00000477487 PZPP20742 1482 aa17.22■□□□□ 0.35
TNRC6A-206ENST00000477487 KIAA1107Q9UPP5 1409 aa17.21■□□□□ 0.35
TNRC6A-206ENST00000477487 CD109Q6YHK3 1445 aa17.21■□□□□ 0.34
TNRC6A-206ENST00000477487 SCAPERQ9BY12 1400 aa17.2■□□□□ 0.34
TNRC6A-206ENST00000477487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.342e-8■■□□□ 11.6
TNRC6A-206ENST00000477487 ERICH6Q7L0X2 663 aa17.19■□□□□ 0.34
TNRC6A-206ENST00000477487 ADGRL1O94910 1474 aa17.19■□□□□ 0.34
TNRC6A-206ENST00000477487 PLEKHH2Q8IVE3 1493 aa17.18■□□□□ 0.34
TNRC6A-206ENST00000477487 NUP155O75694 1391 aa17.17■□□□□ 0.34
TNRC6A-206ENST00000477487 MYT1LQ9UL68 1186 aa17.16■□□□□ 0.34
TNRC6A-206ENST00000477487 SPAG9O60271 1321 aaKnown RBP17.16■□□□□ 0.34
TNRC6A-206ENST00000477487 PKD2Q13563 968 aa17.16■□□□□ 0.34
TNRC6A-206ENST00000477487 RSPH4AQ5TD94 716 aa17.15■□□□□ 0.34
TNRC6A-206ENST00000477487 RAPGEF3O95398 923 aa17.14■□□□□ 0.33
TNRC6A-206ENST00000477487 FAM69CQ0P6D2 419 aa17.14■□□□□ 0.33
TNRC6A-206ENST00000477487 MAST1Q9Y2H9 1570 aa17.14■□□□□ 0.33
TNRC6A-206ENST00000477487 ARAP3Q8WWN8 1544 aa17.14■□□□□ 0.33
TNRC6A-206ENST00000477487 HIRIP3Q9BW71 556 aaPredicted RBP17.13■□□□□ 0.33
TNRC6A-206ENST00000477487 TSPOAP1O95153 1857 aa17.12■□□□□ 0.33
TNRC6A-206ENST00000477487 ZFYVE16Q7Z3T8 1539 aa17.12■□□□□ 0.33
TNRC6A-206ENST00000477487 ANKRD30BQ9BXX2 1392 aa17.12■□□□□ 0.33
TNRC6A-206ENST00000477487 ZNF316A6NFI3 1004 aaPredicted RBP17.12■□□□□ 0.33
TNRC6A-206ENST00000477487 PLXNC1O60486 1568 aa17.1■□□□□ 0.33
TNRC6A-206ENST00000477487 TONSLQ96HA7 1378 aa17.09■□□□□ 0.33
TNRC6A-206ENST00000477487 PPP1R15AO75807 674 aaPredicted RBP17.09■□□□□ 0.33
TNRC6A-206ENST00000477487 ATP7AQ04656 1500 aa17.07■□□□□ 0.32
TNRC6A-206ENST00000477487 DIP2BQ9P265 1576 aa17.07■□□□□ 0.32
TNRC6A-206ENST00000477487 L3MBTL2Q969R5 705 aa17.06■□□□□ 0.32
TNRC6A-206ENST00000477487 MAP3K4Q9Y6R4 1608 aa17.06■□□□□ 0.32
TNRC6A-206ENST00000477487 KIDINS220Q9ULH0 1771 aa17.06■□□□□ 0.32
TNRC6A-206ENST00000477487 INO80Q9ULG1 1556 aaPredicted RBP17.06■□□□□ 0.32
TNRC6A-206ENST00000477487 DUOX2Q9NRD8 1548 aa17.05■□□□□ 0.32
TNRC6A-206ENST00000477487 FAM135AQ9P2D6 1515 aa17.05■□□□□ 0.32
TNRC6A-206ENST00000477487 POGZQ7Z3K3 1410 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms