RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 MLECQ14165 292 aa20.16■□□□□ 0.82
HDAC6-219ENST00000476625 MYO5CQ9NQX4 1742 aa20.16■□□□□ 0.82
HDAC6-219ENST00000476625 POGZQ7Z3K3 1410 aa20.11■□□□□ 0.81
HDAC6-219ENST00000476625 SCAPERQ9BY12 1400 aa20.11■□□□□ 0.81
HDAC6-219ENST00000476625 ATP1B4Q9UN42 357 aaPredicted RBP20.1■□□□□ 0.81
HDAC6-219ENST00000476625 PLCH2O75038 1416 aa20.09■□□□□ 0.81
HDAC6-219ENST00000476625 ARHGAP35Q9NRY4 1499 aa20.08■□□□□ 0.81
HDAC6-219ENST00000476625 ARHGEF12Q9NZN5 1544 aa20.05■□□□□ 0.8
HDAC6-219ENST00000476625 MAGI2Q86UL8 1455 aa20.05■□□□□ 0.8
HDAC6-219ENST00000476625 PREX1Q8TCU6 1659 aa20.04■□□□□ 0.8
HDAC6-219ENST00000476625 CDC42BPBQ9Y5S2 1711 aa20.04■□□□□ 0.8
HDAC6-219ENST00000476625 CEBPAP49715 358 aaPredicted RBP20.02■□□□□ 0.8
HDAC6-219ENST00000476625 ATP10AO60312 1499 aa20.01■□□□□ 0.79
HDAC6-219ENST00000476625 UBTFP17480 764 aaKnown RBP20.01■□□□□ 0.79
HDAC6-219ENST00000476625 ARHGAP5Q13017 1502 aa20.01■□□□□ 0.79
HDAC6-219ENST00000476625 C9orf84Q5VXU9 1444 aa20.01■□□□□ 0.79
HDAC6-219ENST00000476625 DIP2CQ9Y2E4 1556 aa20■□□□□ 0.79
HDAC6-219ENST00000476625 ABCA6Q8N139 1617 aa20■□□□□ 0.79
HDAC6-219ENST00000476625 STRCQ7RTU9 1775 aa20■□□□□ 0.79
HDAC6-219ENST00000476625 KDM5CP41229 1560 aa19.98■□□□□ 0.79
HDAC6-219ENST00000476625 FMN1Q68DA7 1419 aa19.97■□□□□ 0.79
HDAC6-219ENST00000476625 TROQ12816 1431 aaPredicted RBP19.95■□□□□ 0.78
HDAC6-219ENST00000476625 C3P01024 1663 aa19.95■□□□□ 0.78
HDAC6-219ENST00000476625 ITSN2Q9NZM3 1697 aa19.95■□□□□ 0.78
HDAC6-219ENST00000476625 AFAP1Q8N556 730 aa19.95■□□□□ 0.78
HDAC6-219ENST00000476625 PREX2Q70Z35 1606 aa19.94■□□□□ 0.78
HDAC6-219ENST00000476625 EFCAB2Q5VUJ9 269 aa19.94■□□□□ 0.78
HDAC6-219ENST00000476625 ZNF518AQ6AHZ1 1483 aa19.93■□□□□ 0.78
HDAC6-219ENST00000476625 CERKQ8TCT0 537 aa19.92■□□□□ 0.78
HDAC6-219ENST00000476625 CDC42BPAQ5VT25 1732 aa19.92■□□□□ 0.78
HDAC6-219ENST00000476625 ABCC1P33527 1531 aa19.91■□□□□ 0.78
HDAC6-219ENST00000476625 MYT1LQ9UL68 1186 aa19.89■□□□□ 0.77
HDAC6-219ENST00000476625 TRAPPC8Q9Y2L5 1435 aa19.89■□□□□ 0.77
HDAC6-219ENST00000476625 KIDINS220Q9ULH0 1771 aa19.88■□□□□ 0.77
HDAC6-219ENST00000476625 CLIP1P30622 1438 aa19.86■□□□□ 0.77
HDAC6-219ENST00000476625 CHIC1Q5VXU3 224 aa19.86■□□□□ 0.77
HDAC6-219ENST00000476625 REREQ9P2R6 1566 aa19.86■□□□□ 0.77
HDAC6-219ENST00000476625 CDK11AQ9UQ88 783 aaPredicted RBP19.84■□□□□ 0.77
HDAC6-219ENST00000476625 MLH3Q9UHC1 1453 aa19.82■□□□□ 0.76
HDAC6-219ENST00000476625 UHRF1BP1Q6BDS2 1440 aa19.82■□□□□ 0.76
HDAC6-219ENST00000476625 SAMD9LQ8IVG5 1584 aa19.82■□□□□ 0.76
HDAC6-219ENST00000476625 SUPT6HQ7KZ85 1726 aaKnown RBP19.81■□□□□ 0.76
HDAC6-219ENST00000476625 CASKIN1Q8WXD9 1431 aa19.79■□□□□ 0.76
HDAC6-219ENST00000476625 AGLP35573 1532 aa19.78■□□□□ 0.76
HDAC6-219ENST00000476625 SYCP2Q9BX26 1530 aa19.78■□□□□ 0.76
HDAC6-219ENST00000476625 CCDC18Q5T9S5 1454 aa19.77■□□□□ 0.76
HDAC6-219ENST00000476625 SETD1BQ9UPS6 1966 aaKnown RBP19.76■□□□□ 0.75
HDAC6-219ENST00000476625 CLTCQ00610 1675 aaKnown RBP19.75■□□□□ 0.75
HDAC6-219ENST00000476625 LTBP4Q8N2S1 1624 aa19.73■□□□□ 0.75
HDAC6-219ENST00000476625 ZNF777Q9ULD5 760 aaPredicted RBP19.73■□□□□ 0.75
HDAC6-219ENST00000476625 ILDR2Q71H61 639 aa19.72■□□□□ 0.75
HDAC6-219ENST00000476625 MROH2AA6NES4 1674 aa19.71■□□□□ 0.75
HDAC6-219ENST00000476625 FYCO1Q9BQS8 1478 aa19.71■□□□□ 0.75
HDAC6-219ENST00000476625 CAMSAP1Q5T5Y3 1602 aa19.7■□□□□ 0.74
HDAC6-219ENST00000476625 GPATCH8Q9UKJ3 1502 aaKnown RBP19.7■□□□□ 0.74
HDAC6-219ENST00000476625 INO80Q9ULG1 1556 aaPredicted RBP19.7■□□□□ 0.74
HDAC6-219ENST00000476625 ATP7AQ04656 1500 aa19.68■□□□□ 0.74
HDAC6-219ENST00000476625 HNRNPMP52272 730 aaKnown RBP eCLIP19.68■□□□□ 0.74
HDAC6-219ENST00000476625 MYO3AQ8NEV4 1616 aa19.68■□□□□ 0.74
HDAC6-219ENST00000476625 DISP3Q9P2K9 1392 aa19.68■□□□□ 0.74
HDAC6-219ENST00000476625 PTPRTO14522 1441 aa19.68■□□□□ 0.74
HDAC6-219ENST00000476625 NCOA1Q15788 1441 aa19.68■□□□□ 0.74
HDAC6-219ENST00000476625 ESF1Q9H501 851 aaKnown RBP19.67■□□□□ 0.74
HDAC6-219ENST00000476625 PLXNC1O60486 1568 aa19.66■□□□□ 0.74
HDAC6-219ENST00000476625 DMRT2Q9Y5R5 561 aa19.65■□□□□ 0.74
HDAC6-219ENST00000476625 SPATA31D1Q6ZQQ2 1576 aa19.65■□□□□ 0.74
HDAC6-219ENST00000476625 ZNF142P52746 1687 aaPredicted RBP19.63■□□□□ 0.73
HDAC6-219ENST00000476625 CNTLNQ9NXG0 1405 aa19.62■□□□□ 0.73
HDAC6-219ENST00000476625 SPAG9O60271 1321 aaKnown RBP19.62■□□□□ 0.73
HDAC6-219ENST00000476625 NCKAP5LQ9HCH0 1330 aa19.61■□□□□ 0.73
HDAC6-219ENST00000476625 ZMYM3Q14202 1370 aa19.6■□□□□ 0.73
HDAC6-219ENST00000476625 TIAM1Q13009 1591 aa19.6■□□□□ 0.73
HDAC6-219ENST00000476625 ADGBQ8N7X0 1667 aa19.59■□□□□ 0.73
HDAC6-219ENST00000476625 A2MP01023 1474 aa19.59■□□□□ 0.73
HDAC6-219ENST00000476625 CEP170BQ9Y4F5 1589 aaPredicted RBP19.58■□□□□ 0.73
HDAC6-219ENST00000476625 ZNF644Q9H582 1327 aaPredicted RBP19.58■□□□□ 0.73
HDAC6-219ENST00000476625 ZNF335Q9H4Z2 1342 aaPredicted RBP19.57■□□□□ 0.72
HDAC6-219ENST00000476625 NPATQ14207 1427 aa19.57■□□□□ 0.72
HDAC6-219ENST00000476625 PTPRKQ15262 1439 aa19.56■□□□□ 0.72
HDAC6-219ENST00000476625 CCNB3Q8WWL7 1395 aa19.55■□□□□ 0.72
HDAC6-219ENST00000476625 GGT6Q6P531 493 aa19.54■□□□□ 0.72
HDAC6-219ENST00000476625 CFDP1Q9UEE9 299 aaPredicted RBP19.54■□□□□ 0.72
HDAC6-219ENST00000476625 KIAA1107Q9UPP5 1409 aa19.52■□□□□ 0.72
HDAC6-219ENST00000476625 IQSEC2Q5JU85 1478 aa19.5■□□□□ 0.71
HDAC6-219ENST00000476625 PLEKHH2Q8IVE3 1493 aa19.5■□□□□ 0.71
HDAC6-219ENST00000476625 MTUS2Q5JR59 1369 aa19.5■□□□□ 0.71
HDAC6-219ENST00000476625 DNMT1P26358 1616 aaKnown RBP19.5■□□□□ 0.71
HDAC6-219ENST00000476625 TCOF1Q13428 1488 aaKnown RBP19.49■□□□□ 0.71
HDAC6-219ENST00000476625 MBD5Q9P267 1494 aa19.49■□□□□ 0.71
HDAC6-219ENST00000476625 POLR1AO95602 1720 aaPredicted RBP19.49■□□□□ 0.71
HDAC6-219ENST00000476625 EHBP1L1Q8N3D4 1523 aa19.49■□□□□ 0.71
HDAC6-219ENST00000476625 PLA2R1Q13018 1463 aa19.47■□□□□ 0.71
HDAC6-219ENST00000476625 NEURL4Q96JN8 1562 aa19.46■□□□□ 0.71
HDAC6-219ENST00000476625 SOCS7O14512 581 aa19.46■□□□□ 0.71
HDAC6-219ENST00000476625 UBAP1LF5GYI3 381 aa19.43■□□□□ 0.7
HDAC6-219ENST00000476625 A2ML1A8K2U0 1454 aa19.42■□□□□ 0.7
HDAC6-219ENST00000476625 FBXO31Q5XUX0 539 aaPredicted RBP19.42■□□□□ 0.7
HDAC6-219ENST00000476625 CAMSAP2Q08AD1 1489 aa19.41■□□□□ 0.7
HDAC6-219ENST00000476625 PKD2Q13563 968 aa19.39■□□□□ 0.69
HDAC6-219ENST00000476625 CEP162Q5TB80 1403 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms