RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 SCAPERQ9BY12 1400 aa26.71■■□□□ 1.87
ITGB1-211ENST00000475184 MLECQ14165 292 aa26.7■■□□□ 1.86
ITGB1-211ENST00000475184 PLCH2O75038 1416 aa26.7■■□□□ 1.86
ITGB1-211ENST00000475184 PREX1Q8TCU6 1659 aa26.68■■□□□ 1.86
ITGB1-211ENST00000475184 ARHGEF12Q9NZN5 1544 aa26.67■■□□□ 1.86
ITGB1-211ENST00000475184 ATP10AO60312 1499 aa26.65■■□□□ 1.86
ITGB1-211ENST00000475184 C9orf84Q5VXU9 1444 aa26.64■■□□□ 1.85
ITGB1-211ENST00000475184 CERKQ8TCT0 537 aa26.63■■□□□ 1.85
ITGB1-211ENST00000475184 KIF14Q15058 1648 aa26.59■■□□□ 1.85
ITGB1-211ENST00000475184 SETD1BQ9UPS6 1966 aaKnown RBP26.58■■□□□ 1.85
ITGB1-211ENST00000475184 EFCAB2Q5VUJ9 269 aa26.57■■□□□ 1.84
ITGB1-211ENST00000475184 FMN1Q68DA7 1419 aa26.56■■□□□ 1.84
ITGB1-211ENST00000475184 ZNF518AQ6AHZ1 1483 aa26.55■■□□□ 1.84
ITGB1-211ENST00000475184 STRCQ7RTU9 1775 aa26.55■■□□□ 1.84
ITGB1-211ENST00000475184 ATP1B4Q9UN42 357 aaPredicted RBP26.54■■□□□ 1.84
ITGB1-211ENST00000475184 KDM5CP41229 1560 aa26.54■■□□□ 1.84
ITGB1-211ENST00000475184 ARHGAP5Q13017 1502 aa26.52■■□□□ 1.84
ITGB1-211ENST00000475184 CEBPAP49715 358 aaPredicted RBP26.51■■□□□ 1.83
ITGB1-211ENST00000475184 CDK11AQ9UQ88 783 aaPredicted RBP26.51■■□□□ 1.83
ITGB1-211ENST00000475184 LRRIQ1Q96JM4 1722 aa26.5■■□□□ 1.83
ITGB1-211ENST00000475184 ARHGAP35Q9NRY4 1499 aa26.49■■□□□ 1.83
ITGB1-211ENST00000475184 DIP2CQ9Y2E4 1556 aa26.49■■□□□ 1.83
ITGB1-211ENST00000475184 TROQ12816 1431 aaPredicted RBP26.48■■□□□ 1.83
ITGB1-211ENST00000475184 CDC42BPBQ9Y5S2 1711 aa26.47■■□□□ 1.83
ITGB1-211ENST00000475184 UHRF1BP1Q6BDS2 1440 aa26.47■■□□□ 1.83
ITGB1-211ENST00000475184 REREQ9P2R6 1566 aa26.46■■□□□ 1.83
ITGB1-211ENST00000475184 UBTFP17480 764 aaKnown RBP26.45■■□□□ 1.82
ITGB1-211ENST00000475184 AFAP1Q8N556 730 aa26.45■■□□□ 1.82
ITGB1-211ENST00000475184 ABCA6Q8N139 1617 aa26.45■■□□□ 1.82
ITGB1-211ENST00000475184 CLIP1P30622 1438 aa26.45■■□□□ 1.82
ITGB1-211ENST00000475184 C3P01024 1663 aa26.44■■□□□ 1.82
ITGB1-211ENST00000475184 DMRT2Q9Y5R5 561 aa26.44■■□□□ 1.82
ITGB1-211ENST00000475184 EHMT2Q96KQ7 1210 aa26.43■■□□□ 1.82
ITGB1-211ENST00000475184 PREX2Q70Z35 1606 aa26.4■■□□□ 1.82
ITGB1-211ENST00000475184 MYT1LQ9UL68 1186 aa26.4■■□□□ 1.82
ITGB1-211ENST00000475184 MLH3Q9UHC1 1453 aa26.39■■□□□ 1.82
ITGB1-211ENST00000475184 ITSN2Q9NZM3 1697 aa26.38■■□□□ 1.81
ITGB1-211ENST00000475184 ABCC1P33527 1531 aa26.36■■□□□ 1.81
ITGB1-211ENST00000475184 AGLP35573 1532 aa26.36■■□□□ 1.81
ITGB1-211ENST00000475184 KIDINS220Q9ULH0 1771 aa26.33■■□□□ 1.8
ITGB1-211ENST00000475184 DISP3Q9P2K9 1392 aa26.33■■□□□ 1.8
ITGB1-211ENST00000475184 PTPRTO14522 1441 aa26.32■■□□□ 1.8
ITGB1-211ENST00000475184 TRAPPC8Q9Y2L5 1435 aa26.31■■□□□ 1.8
ITGB1-211ENST00000475184 CDC42BPAQ5VT25 1732 aa26.31■■□□□ 1.8
ITGB1-211ENST00000475184 ESF1Q9H501 851 aaKnown RBP26.29■■□□□ 1.8
ITGB1-211ENST00000475184 CCDC18Q5T9S5 1454 aa26.28■■□□□ 1.8
ITGB1-211ENST00000475184 CNTLNQ9NXG0 1405 aa26.25■■□□□ 1.79
ITGB1-211ENST00000475184 ILDR2Q71H61 639 aa26.25■■□□□ 1.79
ITGB1-211ENST00000475184 LTBP4Q8N2S1 1624 aa26.25■■□□□ 1.79
ITGB1-211ENST00000475184 MROH2AA6NES4 1674 aa26.24■■□□□ 1.79
ITGB1-211ENST00000475184 CASKIN1Q8WXD9 1431 aa26.23■■□□□ 1.79
ITGB1-211ENST00000475184 NCOA1Q15788 1441 aa26.22■■□□□ 1.79
ITGB1-211ENST00000475184 SPATA31D1Q6ZQQ2 1576 aa26.22■■□□□ 1.79
ITGB1-211ENST00000475184 SAMD9LQ8IVG5 1584 aa26.2■■□□□ 1.78
ITGB1-211ENST00000475184 IQSEC2Q5JU85 1478 aa26.19■■□□□ 1.78
ITGB1-211ENST00000475184 SUPT6HQ7KZ85 1726 aaKnown RBP26.17■■□□□ 1.78
ITGB1-211ENST00000475184 SOCS7O14512 581 aa26.17■■□□□ 1.78
ITGB1-211ENST00000475184 CAMSAP1Q5T5Y3 1602 aa26.17■■□□□ 1.78
ITGB1-211ENST00000475184 NPATQ14207 1427 aa26.16■■□□□ 1.78
ITGB1-211ENST00000475184 SYCP2Q9BX26 1530 aa26.15■■□□□ 1.78
ITGB1-211ENST00000475184 FYCO1Q9BQS8 1478 aa26.13■■□□□ 1.77
ITGB1-211ENST00000475184 CLTCQ00610 1675 aaKnown RBP26.12■■□□□ 1.77
ITGB1-211ENST00000475184 ZNF142P52746 1687 aaPredicted RBP26.1■■□□□ 1.77
ITGB1-211ENST00000475184 ZMYM3Q14202 1370 aa26.09■■□□□ 1.77
ITGB1-211ENST00000475184 ZNF777Q9ULD5 760 aaPredicted RBP26.09■■□□□ 1.77
ITGB1-211ENST00000475184 MYO3AQ8NEV4 1616 aa26.09■■□□□ 1.77
ITGB1-211ENST00000475184 ATP7AQ04656 1500 aa26.09■■□□□ 1.77
ITGB1-211ENST00000475184 PLXNC1O60486 1568 aa26.08■■□□□ 1.77
ITGB1-211ENST00000475184 SPAG9O60271 1321 aaKnown RBP26.08■■□□□ 1.77
ITGB1-211ENST00000475184 GPATCH8Q9UKJ3 1502 aaKnown RBP26.08■■□□□ 1.77
ITGB1-211ENST00000475184 INO80Q9ULG1 1556 aaPredicted RBP26.07■■□□□ 1.76
ITGB1-211ENST00000475184 CHIC1Q5VXU3 224 aa26.07■■□□□ 1.76
ITGB1-211ENST00000475184 HNRNPMP52272 730 aaKnown RBP eCLIP26.03■■□□□ 1.762e-7■■■□□ 17
ITGB1-211ENST00000475184 CEP170BQ9Y4F5 1589 aaPredicted RBP26.03■■□□□ 1.76
ITGB1-211ENST00000475184 KIAA1107Q9UPP5 1409 aa26.02■■□□□ 1.76
ITGB1-211ENST00000475184 PLEKHH2Q8IVE3 1493 aa26.02■■□□□ 1.76
ITGB1-211ENST00000475184 A2MP01023 1474 aa26.01■■□□□ 1.75
ITGB1-211ENST00000475184 PLA2R1Q13018 1463 aa26.01■■□□□ 1.75
ITGB1-211ENST00000475184 NCKAP5LQ9HCH0 1330 aa26.01■■□□□ 1.75
ITGB1-211ENST00000475184 ADGBQ8N7X0 1667 aa25.99■■□□□ 1.75
ITGB1-211ENST00000475184 ZNF335Q9H4Z2 1342 aaPredicted RBP25.99■■□□□ 1.75
ITGB1-211ENST00000475184 PTPRKQ15262 1439 aa25.98■■□□□ 1.75
ITGB1-211ENST00000475184 TCOF1Q13428 1488 aaKnown RBP25.97■■□□□ 1.75
ITGB1-211ENST00000475184 CFDP1Q9UEE9 299 aaPredicted RBP25.96■■□□□ 1.75
ITGB1-211ENST00000475184 PKD2Q13563 968 aa25.95■■□□□ 1.74
ITGB1-211ENST00000475184 CCNB3Q8WWL7 1395 aa25.95■■□□□ 1.74
ITGB1-211ENST00000475184 UBAP1LF5GYI3 381 aa25.93■■□□□ 1.74
ITGB1-211ENST00000475184 GGT6Q6P531 493 aa25.92■■□□□ 1.74
ITGB1-211ENST00000475184 POLR1AO95602 1720 aaPredicted RBP25.88■■□□□ 1.73
ITGB1-211ENST00000475184 PPP6R1Q9UPN7 881 aa25.88■■□□□ 1.73
ITGB1-211ENST00000475184 DNMT1P26358 1616 aaKnown RBP25.88■■□□□ 1.73
ITGB1-211ENST00000475184 MTUS2Q5JR59 1369 aa25.87■■□□□ 1.73
ITGB1-211ENST00000475184 TIAM1Q13009 1591 aa25.86■■□□□ 1.73
ITGB1-211ENST00000475184 A2ML1A8K2U0 1454 aa25.86■■□□□ 1.73
ITGB1-211ENST00000475184 MBD5Q9P267 1494 aa25.82■■□□□ 1.72
ITGB1-211ENST00000475184 ZNF644Q9H582 1327 aaPredicted RBP25.81■■□□□ 1.72
ITGB1-211ENST00000475184 EHBP1L1Q8N3D4 1523 aa25.8■■□□□ 1.72
ITGB1-211ENST00000475184 RTEL1-TNFRSF6BF6WH68 1400 aa25.8■■□□□ 1.72
ITGB1-211ENST00000475184 NEURL4Q96JN8 1562 aa25.79■■□□□ 1.72
ITGB1-211ENST00000475184 DHX29Q7Z478 1369 aaKnown RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms