RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, human

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL4A-208	ENST00000474116	MLEC	Q14165	292 aa		29.18	■■■□□ 2.26
CUL4A-208	ENST00000474116	FER1L4	A9Z1Z3	1794 aa		29.16	■■■□□ 2.26
CUL4A-208	ENST00000474116	ATP10A	O60312	1499 aa		29.12	■■■□□ 2.25
CUL4A-208	ENST00000474116	ARHGEF12	Q9NZN5	1544 aa		29.11	■■■□□ 2.25
CUL4A-208	ENST00000474116	CERK	Q8TCT0	537 aa		29.11	■■■□□ 2.25
CUL4A-208	ENST00000474116	EFCAB2	Q5VUJ9	269 aa		29.08	■■■□□ 2.25
CUL4A-208	ENST00000474116	C9orf84	Q5VXU9	1444 aa		29.07	■■■□□ 2.24
CUL4A-208	ENST00000474116	MYO5C	Q9NQX4	1742 aa		29.06	■■■□□ 2.24
CUL4A-208	ENST00000474116	FMN1	Q68DA7	1419 aa		29.03	■■■□□ 2.24
CUL4A-208	ENST00000474116	ATP1B4	Q9UN42	357 aa	Predicted RBP	29.02	■■■□□ 2.24
CUL4A-208	ENST00000474116	PREX1	Q8TCU6	1659 aa		29.02	■■■□□ 2.24
CUL4A-208	ENST00000474116	CEBPA	P49715	358 aa	Predicted RBP	29.01	■■■□□ 2.23
CUL4A-208	ENST00000474116	KIF14	Q15058	1648 aa		29.01	■■■□□ 2.23
CUL4A-208	ENST00000474116	CDK11A	Q9UQ88	783 aa	Predicted RBP	29	■■■□□ 2.23
CUL4A-208	ENST00000474116	ARHGAP35	Q9NRY4	1499 aa		28.99	■■■□□ 2.23
CUL4A-208	ENST00000474116	ZNF518A	Q6AHZ1	1483 aa		28.97	■■■□□ 2.23
CUL4A-208	ENST00000474116	AFAP1	Q8N556	730 aa		28.97	■■■□□ 2.23
CUL4A-208	ENST00000474116	KDM5C	P41229	1560 aa		28.96	■■■□□ 2.23
CUL4A-208	ENST00000474116	UBTF	P17480	764 aa	Known RBP	28.96	■■■□□ 2.23
CUL4A-208	ENST00000474116	TRO	Q12816	1431 aa	Predicted RBP	28.94	■■■□□ 2.22
CUL4A-208	ENST00000474116	ARHGAP5	Q13017	1502 aa		28.93	■■■□□ 2.22
CUL4A-208	ENST00000474116	STRC	Q7RTU9	1775 aa		28.93	■■■□□ 2.22
CUL4A-208	ENST00000474116	EHMT2	Q96KQ7	1210 aa		28.92	■■■□□ 2.22
CUL4A-208	ENST00000474116	DIP2C	Q9Y2E4	1556 aa		28.89	■■■□□ 2.22
CUL4A-208	ENST00000474116	RERE	Q9P2R6	1566 aa		28.88	■■■□□ 2.21
CUL4A-208	ENST00000474116	DMRT2	Q9Y5R5	561 aa		28.88	■■■□□ 2.21
CUL4A-208	ENST00000474116	LRRIQ1	Q96JM4	1722 aa		28.88	■■■□□ 2.21
CUL4A-208	ENST00000474116	CLIP1	P30622	1438 aa		28.86	■■■□□ 2.21
CUL4A-208	ENST00000474116	UHRF1BP1	Q6BDS2	1440 aa		28.86	■■■□□ 2.21
CUL4A-208	ENST00000474116	SETD1B	Q9UPS6	1966 aa	Known RBP	28.86	■■■□□ 2.21
CUL4A-208	ENST00000474116	MLH3	Q9UHC1	1453 aa		28.85	■■■□□ 2.21
CUL4A-208	ENST00000474116	CDC42BPB	Q9Y5S2	1711 aa		28.85	■■■□□ 2.21
CUL4A-208	ENST00000474116	MYT1L	Q9UL68	1186 aa		28.83	■■■□□ 2.21
CUL4A-208	ENST00000474116	ABCA6	Q8N139	1617 aa		28.83	■■■□□ 2.21
CUL4A-208	ENST00000474116	C3	P01024	1663 aa		28.8	■■■□□ 2.2
CUL4A-208	ENST00000474116	AGL	P35573	1532 aa		28.79	■■■□□ 2.2
CUL4A-208	ENST00000474116	TRAPPC8	Q9Y2L5	1435 aa		28.78	■■■□□ 2.2
CUL4A-208	ENST00000474116	PTPRT	O14522	1441 aa		28.77	■■■□□ 2.2
CUL4A-208	ENST00000474116	PREX2	Q70Z35	1606 aa		28.76	■■■□□ 2.2
CUL4A-208	ENST00000474116	ABCC1	P33527	1531 aa		28.76	■■■□□ 2.19
CUL4A-208	ENST00000474116	ITSN2	Q9NZM3	1697 aa		28.73	■■■□□ 2.19
CUL4A-208	ENST00000474116	KIDINS220	Q9ULH0	1771 aa		28.7	■■■□□ 2.19
CUL4A-208	ENST00000474116	CASKIN1	Q8WXD9	1431 aa		28.69	■■■□□ 2.18
CUL4A-208	ENST00000474116	ILDR2	Q71H61	639 aa		28.69	■■■□□ 2.18
CUL4A-208	ENST00000474116	ESF1	Q9H501	851 aa	Known RBP	28.69	■■■□□ 2.18
CUL4A-208	ENST00000474116	CCDC18	Q5T9S5	1454 aa		28.68	■■■□□ 2.18
CUL4A-208	ENST00000474116	DISP3	Q9P2K9	1392 aa		28.68	■■■□□ 2.18
CUL4A-208	ENST00000474116	CNTLN	Q9NXG0	1405 aa		28.66	■■■□□ 2.18
CUL4A-208	ENST00000474116	CDC42BPA	Q5VT25	1732 aa		28.66	■■■□□ 2.18
CUL4A-208	ENST00000474116	LTBP4	Q8N2S1	1624 aa		28.65	■■■□□ 2.18
CUL4A-208	ENST00000474116	CHIC1	Q5VXU3	224 aa		28.64	■■■□□ 2.18
CUL4A-208	ENST00000474116	NCOA1	Q15788	1441 aa		28.63	■■■□□ 2.17
CUL4A-208	ENST00000474116	SAMD9L	Q8IVG5	1584 aa		28.6	■■■□□ 2.17
CUL4A-208	ENST00000474116	NPAT	Q14207	1427 aa		28.58	■■■□□ 2.17
CUL4A-208	ENST00000474116	SOCS7	O14512	581 aa		28.57	■■■□□ 2.16
CUL4A-208	ENST00000474116	IQSEC2	Q5JU85	1478 aa		28.57	■■■□□ 2.16
CUL4A-208	ENST00000474116	MROH2A	A6NES4	1674 aa		28.57	■■■□□ 2.16
CUL4A-208	ENST00000474116	ZMYM3	Q14202	1370 aa		28.55	■■■□□ 2.16
CUL4A-208	ENST00000474116	ZNF777	Q9ULD5	760 aa	Predicted RBP	28.54	■■■□□ 2.16
CUL4A-208	ENST00000474116	CAMSAP1	Q5T5Y3	1602 aa		28.54	■■■□□ 2.16
CUL4A-208	ENST00000474116	GPATCH8	Q9UKJ3	1502 aa	Known RBP	28.53	■■■□□ 2.16
CUL4A-208	ENST00000474116	FYCO1	Q9BQS8	1478 aa		28.53	■■■□□ 2.16
CUL4A-208	ENST00000474116	SPAG9	O60271	1321 aa	Known RBP	28.52	■■■□□ 2.16
CUL4A-208	ENST00000474116	HNRNPM	P52272	730 aa	Known RBP eCLIP	28.52	■■■□□ 2.16	1e-8	■■■■■ 91.7
CUL4A-208	ENST00000474116	SYCP2	Q9BX26	1530 aa		28.52	■■■□□ 2.16
CUL4A-208	ENST00000474116	SUPT6H	Q7KZ85	1726 aa	Known RBP	28.49	■■■□□ 2.15
CUL4A-208	ENST00000474116	SPATA31D1	Q6ZQQ2	1576 aa		28.49	■■■□□ 2.15
CUL4A-208	ENST00000474116	NCKAP5L	Q9HCH0	1330 aa		28.46	■■■□□ 2.15
CUL4A-208	ENST00000474116	KIAA1107	Q9UPP5	1409 aa		28.46	■■■□□ 2.15
CUL4A-208	ENST00000474116	PLXNC1	O60486	1568 aa		28.45	■■■□□ 2.15
CUL4A-208	ENST00000474116	ATP7A	Q04656	1500 aa		28.45	■■■□□ 2.15
CUL4A-208	ENST00000474116	CLTC	Q00610	1675 aa	Known RBP	28.45	■■■□□ 2.14
CUL4A-208	ENST00000474116	INO80	Q9ULG1	1556 aa	Predicted RBP	28.43	■■■□□ 2.14
CUL4A-208	ENST00000474116	A2M	P01023	1474 aa		28.42	■■■□□ 2.14
CUL4A-208	ENST00000474116	CFDP1	Q9UEE9	299 aa	Predicted RBP	28.41	■■■□□ 2.14
CUL4A-208	ENST00000474116	PTPRK	Q15262	1439 aa		28.41	■■■□□ 2.14
CUL4A-208	ENST00000474116	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	28.41	■■■□□ 2.14
CUL4A-208	ENST00000474116	PLEKHH2	Q8IVE3	1493 aa		28.4	■■■□□ 2.14
CUL4A-208	ENST00000474116	ZNF142	P52746	1687 aa	Predicted RBP	28.4	■■■□□ 2.14
CUL4A-208	ENST00000474116	PLA2R1	Q13018	1463 aa		28.4	■■■□□ 2.14
CUL4A-208	ENST00000474116	MYO3A	Q8NEV4	1616 aa		28.4	■■■□□ 2.14
CUL4A-208	ENST00000474116	PKD2	Q13563	968 aa		28.38	■■■□□ 2.13
CUL4A-208	ENST00000474116	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	28.37	■■■□□ 2.13
CUL4A-208	ENST00000474116	TCOF1	Q13428	1488 aa	Known RBP	28.36	■■■□□ 2.13
CUL4A-208	ENST00000474116	GGT6	Q6P531	493 aa		28.36	■■■□□ 2.13
CUL4A-208	ENST00000474116	CCNB3	Q8WWL7	1395 aa		28.36	■■■□□ 2.13
CUL4A-208	ENST00000474116	PPP6R1	Q9UPN7	881 aa		28.34	■■■□□ 2.13
CUL4A-208	ENST00000474116	UBAP1L	F5GYI3	381 aa		28.32	■■■□□ 2.12
CUL4A-208	ENST00000474116	ADGB	Q8N7X0	1667 aa		28.3	■■■□□ 2.12
CUL4A-208	ENST00000474116	ZNF644	Q9H582	1327 aa	Predicted RBP	28.28	■■■□□ 2.12
CUL4A-208	ENST00000474116	MBD5	Q9P267	1494 aa		28.27	■■■□□ 2.12
CUL4A-208	ENST00000474116	MTUS2	Q5JR59	1369 aa		28.26	■■■□□ 2.12
CUL4A-208	ENST00000474116	A2ML1	A8K2U0	1454 aa		28.24	■■■□□ 2.11
CUL4A-208	ENST00000474116	TIAM1	Q13009	1591 aa		28.24	■■■□□ 2.11
CUL4A-208	ENST00000474116	DNMT1	P26358	1616 aa	Known RBP	28.23	■■■□□ 2.11
CUL4A-208	ENST00000474116	RTEL1-TNFRSF6B	F6WH68	1400 aa		28.22	■■■□□ 2.11
CUL4A-208	ENST00000474116	DHX29	Q7Z478	1369 aa	Known RBP	28.21	■■■□□ 2.11
CUL4A-208	ENST00000474116	FBXO31	Q5XUX0	539 aa	Predicted RBP	28.15	■■■□□ 2.1
CUL4A-208	ENST00000474116	EHBP1L1	Q8N3D4	1523 aa		28.14	■■■□□ 2.1
CUL4A-208	ENST00000474116	CEP162	Q5TB80	1403 aa		28.14	■■■□□ 2.1

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