RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 NCOA2Q15596 1464 aa13.86□□□□□ -0.19
RRP1B-202ENST00000470886 HFM1A2PYH4 1435 aa13.85□□□□□ -0.19
RRP1B-202ENST00000470886 MIA2Q96PC5 1412 aa13.84□□□□□ -0.19
RRP1B-202ENST00000470886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.84□□□□□ -0.194e-9■■■■■ 27.9
RRP1B-202ENST00000470886 TSHZ2Q9NRE2 1034 aa13.84□□□□□ -0.19
RRP1B-202ENST00000470886 HSPA5P11021 654 aaKnown RBP13.83□□□□□ -0.19
RRP1B-202ENST00000470886 HSP90AA1P07900 732 aaKnown RBP13.83□□□□□ -0.2
RRP1B-202ENST00000470886 ERCC6Q03468 1493 aa13.82□□□□□ -0.2
RRP1B-202ENST00000470886 CTTNBP2Q8WZ74 1663 aa13.82□□□□□ -0.2
RRP1B-202ENST00000470886 GRIN2BQ13224 1484 aa13.81□□□□□ -0.2
RRP1B-202ENST00000470886 KNSTRNQ9Y448 316 aa13.8□□□□□ -0.2
RRP1B-202ENST00000470886 MPHOSPH9Q99550 1183 aa13.79□□□□□ -0.2
RRP1B-202ENST00000470886 ANKRD30AQ9BXX3 1397 aa13.79□□□□□ -0.2
RRP1B-202ENST00000470886 KIF21AQ7Z4S6 1674 aa13.79□□□□□ -0.2
RRP1B-202ENST00000470886 MRC2Q9UBG0 1479 aa13.78□□□□□ -0.2
RRP1B-202ENST00000470886 IFT140Q96RY7 1462 aa13.77□□□□□ -0.2
RRP1B-202ENST00000470886 CHGAP10645 457 aaKnown RBP13.76□□□□□ -0.21
RRP1B-202ENST00000470886 ROCK2O75116 1388 aaKnown RBP13.76□□□□□ -0.21
RRP1B-202ENST00000470886 AKNAQ7Z591 1439 aa13.75□□□□□ -0.21
RRP1B-202ENST00000470886 B4GALNT3Q6L9W6 998 aa13.75□□□□□ -0.21
RRP1B-202ENST00000470886 NPM1P06748 294 aaKnown RBP eCLIP13.74□□□□□ -0.21
RRP1B-202ENST00000470886 RALBP1Q15311 655 aa13.74□□□□□ -0.21
RRP1B-202ENST00000470886 CFAP53Q96M91 514 aa13.74□□□□□ -0.21
RRP1B-202ENST00000470886 RSPH4AQ5TD94 716 aa13.74□□□□□ -0.21
RRP1B-202ENST00000470886 IQGAP2Q13576 1575 aa13.73□□□□□ -0.21
RRP1B-202ENST00000470886 TMF1P82094 1093 aa13.72□□□□□ -0.21
RRP1B-202ENST00000470886 ARID4BQ4LE39 1312 aaPredicted RBP13.71□□□□□ -0.21
RRP1B-202ENST00000470886 ROCK1Q13464 1354 aa13.71□□□□□ -0.21
RRP1B-202ENST00000470886 NESP48681 1621 aa13.71□□□□□ -0.21
RRP1B-202ENST00000470886 PTPN23Q9H3S7 1636 aa13.71□□□□□ -0.22
RRP1B-202ENST00000470886 MS4A1P11836 297 aa13.7□□□□□ -0.22
RRP1B-202ENST00000470886 TCERG1O14776 1098 aaKnown RBP13.7□□□□□ -0.22
RRP1B-202ENST00000470886 PRKCSHP14314 528 aaPredicted RBP13.7□□□□□ -0.22
RRP1B-202ENST00000470886 RGL3Q3MIN7 710 aa13.7□□□□□ -0.22
RRP1B-202ENST00000470886 MAPKBP1O60336 1514 aa13.7□□□□□ -0.22
RRP1B-202ENST00000470886 KTN1Q86UP2 1357 aaKnown RBP13.69□□□□□ -0.22
RRP1B-202ENST00000470886 MYH16Q9H6N6 1097 aa13.69□□□□□ -0.22
RRP1B-202ENST00000470886 NUDCQ9Y266 331 aa13.69□□□□□ -0.22
RRP1B-202ENST00000470886 URB2Q14146 1524 aaKnown RBP13.68□□□□□ -0.22
RRP1B-202ENST00000470886 PDE3BQ13370 1112 aa13.68□□□□□ -0.22
RRP1B-202ENST00000470886 WDR97A6NE52 1622 aa13.68□□□□□ -0.22
RRP1B-202ENST00000470886 NAIPQ13075 1403 aa13.67□□□□□ -0.22
RRP1B-202ENST00000470886 EPRSP07814 1512 aaKnown RBP13.67□□□□□ -0.22
RRP1B-202ENST00000470886 CHMP4BQ9H444 224 aaKnown RBP13.66□□□□□ -0.22
RRP1B-202ENST00000470886 STAG3Q9UJ98 1225 aa13.66□□□□□ -0.22
RRP1B-202ENST00000470886 KIAA0586Q9BVV6 1533 aa13.66□□□□□ -0.22
RRP1B-202ENST00000470886 DCAF11Q8TEB1 546 aa13.66□□□□□ -0.22
RRP1B-202ENST00000470886 CNTLNQ9NXG0 1405 aa13.65□□□□□ -0.22
RRP1B-202ENST00000470886 GOLGA6L22H0YM25 854 aa13.65□□□□□ -0.22
RRP1B-202ENST00000470886 L3MBTL2Q969R5 705 aa13.65□□□□□ -0.22
RRP1B-202ENST00000470886 PKD2Q13563 968 aa13.65□□□□□ -0.22
RRP1B-202ENST00000470886 DEKP35659 375 aaKnown RBP13.64□□□□□ -0.23
RRP1B-202ENST00000470886 UGGT2Q9NYU1 1516 aa13.64□□□□□ -0.23
RRP1B-202ENST00000470886 FANCIQ9NVI1 1328 aa13.64□□□□□ -0.23
RRP1B-202ENST00000470886 SNAPC4Q5SXM2 1469 aa13.63□□□□□ -0.23
RRP1B-202ENST00000470886 ZBED9Q6R2W3 1325 aa13.63□□□□□ -0.23
RRP1B-202ENST00000470886 ESF1Q9H501 851 aaKnown RBP13.63□□□□□ -0.23
RRP1B-202ENST00000470886 TCOF1Q13428 1488 aaKnown RBP13.63□□□□□ -0.23
RRP1B-202ENST00000470886 RCAN3Q9UKA8 241 aa13.62□□□□□ -0.23
RRP1B-202ENST00000470886 SAMD9Q5K651 1589 aa13.62□□□□□ -0.23
RRP1B-202ENST00000470886 ABCA5Q8WWZ7 1642 aa13.61□□□□□ -0.23
RRP1B-202ENST00000470886 DAPK1P53355 1430 aa13.6□□□□□ -0.23
RRP1B-202ENST00000470886 TROQ12816 1431 aaPredicted RBP13.6□□□□□ -0.23
RRP1B-202ENST00000470886 IPO9Q96P70 1041 aaKnown RBP13.6□□□□□ -0.23
RRP1B-202ENST00000470886 TRIM44Q96DX7 344 aaPredicted RBP13.59□□□□□ -0.23
RRP1B-202ENST00000470886 KANK1Q14678 1352 aa13.59□□□□□ -0.23
RRP1B-202ENST00000470886 PNNQ9H307 717 aaKnown RBP13.59□□□□□ -0.23
RRP1B-202ENST00000470886 NUP155O75694 1391 aa13.59□□□□□ -0.23
RRP1B-202ENST00000470886 KIF15Q9NS87 1388 aa13.59□□□□□ -0.23
RRP1B-202ENST00000470886 FTSJ3Q8IY81 847 aaKnown RBP13.59□□□□□ -0.23
RRP1B-202ENST00000470886 NLRP13Q86W25 1043 aa13.59□□□□□ -0.23
RRP1B-202ENST00000470886 PRKRIP1Q9H875 184 aaPredicted RBP13.59□□□□□ -0.23
RRP1B-202ENST00000470886 CCDC7Q96M83 1385 aa13.58□□□□□ -0.23
RRP1B-202ENST00000470886 LAS1LQ9Y4W2 734 aaKnown RBP13.58□□□□□ -0.24
RRP1B-202ENST00000470886 CC2D1BQ5T0F9 858 aaKnown RBP13.58□□□□□ -0.24
RRP1B-202ENST00000470886 KCNH8Q96L42 1107 aa13.57□□□□□ -0.24
RRP1B-202ENST00000470886 MAGI1Q96QZ7 1491 aaPredicted RBP13.56□□□□□ -0.24
RRP1B-202ENST00000470886 JPH4Q96JJ6 628 aa13.56□□□□□ -0.24
RRP1B-202ENST00000470886 L1TD1Q5T7N2 865 aaKnown RBP13.56□□□□□ -0.24
RRP1B-202ENST00000470886 USP35Q9P2H5 1018 aa13.56□□□□□ -0.24
RRP1B-202ENST00000470886 MAPK8IP3Q9UPT6 1336 aa13.55□□□□□ -0.24
RRP1B-202ENST00000470886 RGS3P49796 1198 aa13.55□□□□□ -0.24
RRP1B-202ENST00000470886 CFAP44Q96MT7 982 aa13.55□□□□□ -0.24
RRP1B-202ENST00000470886 ADAMTS12P58397 1594 aa13.55□□□□□ -0.24
RRP1B-202ENST00000470886 MYBBP1AQ9BQG0 1328 aaKnown RBP13.54□□□□□ -0.24
RRP1B-202ENST00000470886 FOXD1Q16676 465 aa13.53□□□□□ -0.24
RRP1B-202ENST00000470886 CASC1Q6TDU7 716 aa13.53□□□□□ -0.24
RRP1B-202ENST00000470886 KIAA1107Q9UPP5 1409 aa13.53□□□□□ -0.24
RRP1B-202ENST00000470886 ITSN2Q9NZM3 1697 aa13.53□□□□□ -0.24
RRP1B-202ENST00000470886 USP47Q96K76 1375 aa13.52□□□□□ -0.25
RRP1B-202ENST00000470886 NCLP19338 710 aaKnown RBP13.52□□□□□ -0.25
RRP1B-202ENST00000470886 EIF3AQ14152 1382 aaKnown RBP13.52□□□□□ -0.25
RRP1B-202ENST00000470886 ANKRD50Q9ULJ7 1429 aa13.52□□□□□ -0.25
RRP1B-202ENST00000470886 SYNJ2O15056 1496 aa13.51□□□□□ -0.25
RRP1B-202ENST00000470886 GRIN2AQ12879 1464 aa13.51□□□□□ -0.25
RRP1B-202ENST00000470886 PLEKHH2Q8IVE3 1493 aa13.5□□□□□ -0.25
RRP1B-202ENST00000470886 STAC3Q96MF2 364 aa13.5□□□□□ -0.25
RRP1B-202ENST00000470886 CDK13Q14004 1512 aaKnown RBP13.5□□□□□ -0.25
RRP1B-202ENST00000470886 WDR62O43379 1518 aa13.49□□□□□ -0.25
RRP1B-202ENST00000470886 PBRM1Q86U86 1689 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms