RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 TARBP1Q13395 1621 aaKnown RBP17.88■□□□□ 0.45
PDZRN3-205ENST00000466780 EPRSP07814 1512 aaKnown RBP17.87■□□□□ 0.45
PDZRN3-205ENST00000466780 NBPF8Q3BBV2 869 aa17.87■□□□□ 0.45
PDZRN3-205ENST00000466780 ZBED9Q6R2W3 1325 aa17.87■□□□□ 0.45
PDZRN3-205ENST00000466780 MRS2Q9HD23 443 aa17.86■□□□□ 0.45
PDZRN3-205ENST00000466780 MIA2Q96PC5 1412 aa17.86■□□□□ 0.45
PDZRN3-205ENST00000466780 ARID3CA6NKF2 412 aa17.86■□□□□ 0.45
PDZRN3-205ENST00000466780 ANKRD30BQ9BXX2 1392 aa17.84■□□□□ 0.45
PDZRN3-205ENST00000466780 TEX14Q8IWB6 1497 aa17.84■□□□□ 0.45
PDZRN3-205ENST00000466780 CDK13Q14004 1512 aaKnown RBP17.84■□□□□ 0.45
PDZRN3-205ENST00000466780 RPRD2Q5VT52 1461 aaKnown RBP17.84■□□□□ 0.45
PDZRN3-205ENST00000466780 B4GALNT3Q6L9W6 998 aa17.83■□□□□ 0.45
PDZRN3-205ENST00000466780 SPATA31E1Q6ZUB1 1445 aa17.83■□□□□ 0.44
PDZRN3-205ENST00000466780 KIF7Q2M1P5 1343 aa17.82■□□□□ 0.44
PDZRN3-205ENST00000466780 ERICH6Q7L0X2 663 aa17.8■□□□□ 0.44
PDZRN3-205ENST00000466780 PBRM1Q86U86 1689 aa17.79■□□□□ 0.44
PDZRN3-205ENST00000466780 POLR1AO95602 1720 aaPredicted RBP17.79■□□□□ 0.44
PDZRN3-205ENST00000466780 MRC2Q9UBG0 1479 aa17.79■□□□□ 0.44
PDZRN3-205ENST00000466780 WDR62O43379 1518 aa17.79■□□□□ 0.44
PDZRN3-205ENST00000466780 ROCK1Q13464 1354 aa17.78■□□□□ 0.44
PDZRN3-205ENST00000466780 DAPK1P53355 1430 aa17.78■□□□□ 0.44
PDZRN3-205ENST00000466780 IQGAP2Q13576 1575 aa17.78■□□□□ 0.44
PDZRN3-205ENST00000466780 ABCC5O15440 1437 aa17.75■□□□□ 0.43
PDZRN3-205ENST00000466780 ADAMTS12P58397 1594 aa17.74■□□□□ 0.43
PDZRN3-205ENST00000466780 DNMT1P26358 1616 aaKnown RBP17.74■□□□□ 0.43
PDZRN3-205ENST00000466780 ZNF608Q9ULD9 1512 aaPredicted RBP17.73■□□□□ 0.43
PDZRN3-205ENST00000466780 ZNF644Q9H582 1327 aaPredicted RBP17.72■□□□□ 0.43
PDZRN3-205ENST00000466780 SLC4A1APQ9BWU0 796 aaKnown RBP17.72■□□□□ 0.43
PDZRN3-205ENST00000466780 DHX29Q7Z478 1369 aaKnown RBP17.72■□□□□ 0.43
PDZRN3-205ENST00000466780 SMG6Q86US8 1419 aaKnown RBP17.71■□□□□ 0.43
PDZRN3-205ENST00000466780 PZPP20742 1482 aa17.68■□□□□ 0.42
PDZRN3-205ENST00000466780 IFT140Q96RY7 1462 aa17.67■□□□□ 0.42
PDZRN3-205ENST00000466780 MBD5Q9P267 1494 aa17.67■□□□□ 0.42
PDZRN3-205ENST00000466780 BCORL1Q5H9F3 1711 aa17.67■□□□□ 0.42
PDZRN3-205ENST00000466780 RNF123Q5XPI4 1314 aa17.66■□□□□ 0.42
PDZRN3-205ENST00000466780 NUDCQ9Y266 331 aa17.65■□□□□ 0.42
PDZRN3-205ENST00000466780 CNGB1Q14028 1251 aaPredicted RBP17.63■□□□□ 0.41
PDZRN3-205ENST00000466780 NUP153P49790 1475 aaKnown RBP17.63■□□□□ 0.41
PDZRN3-205ENST00000466780 USP47Q96K76 1375 aa17.63■□□□□ 0.41
PDZRN3-205ENST00000466780 MYT1LQ9UL68 1186 aa17.62■□□□□ 0.41
PDZRN3-205ENST00000466780 NOP58Q9Y2X3 529 aaKnown RBP17.62■□□□□ 0.41
PDZRN3-205ENST00000466780 FBLN2P98095 1184 aa17.61■□□□□ 0.41
PDZRN3-205ENST00000466780 KIAA0586Q9BVV6 1533 aa17.61■□□□□ 0.41
PDZRN3-205ENST00000466780 PAK3O75914 559 aaPredicted RBP17.61■□□□□ 0.41
PDZRN3-205ENST00000466780 DISP1Q96F81 1524 aa17.6■□□□□ 0.41
PDZRN3-205ENST00000466780 POLR3GLQ9BT43 218 aa17.59■□□□□ 0.41
PDZRN3-205ENST00000466780 KIAA0556O60303 1618 aa17.59■□□□□ 0.41
PDZRN3-205ENST00000466780 KIAA1107Q9UPP5 1409 aa17.59■□□□□ 0.41
PDZRN3-205ENST00000466780 KDM5CP41229 1560 aa17.59■□□□□ 0.41
PDZRN3-205ENST00000466780 ERCC6Q03468 1493 aa17.59■□□□□ 0.41
PDZRN3-205ENST00000466780 CHMP7Q8WUX9 453 aaPredicted RBP17.58■□□□□ 0.41
PDZRN3-205ENST00000466780 KIF14Q15058 1648 aa17.58■□□□□ 0.4
PDZRN3-205ENST00000466780 DEKP35659 375 aaKnown RBP17.58■□□□□ 0.4
PDZRN3-205ENST00000466780 SENP3-EIF4A1A0A087X0R7 540 aa17.57■□□□□ 0.4
PDZRN3-205ENST00000466780 ZNF326Q5BKZ1 582 aaKnown RBP17.57■□□□□ 0.4
PDZRN3-205ENST00000466780 PNISRQ8TF01 805 aaKnown RBP17.57■□□□□ 0.4
PDZRN3-205ENST00000466780 CCDC136Q96JN2 1154 aa17.57■□□□□ 0.4
PDZRN3-205ENST00000466780 CAMSAP2Q08AD1 1489 aa17.57■□□□□ 0.4
PDZRN3-205ENST00000466780 GRIN2AQ12879 1464 aa17.57■□□□□ 0.4
PDZRN3-205ENST00000466780 RAPGEF6Q8TEU7 1601 aa17.57■□□□□ 0.4
PDZRN3-205ENST00000466780 ARID4BQ4LE39 1312 aaPredicted RBP17.55■□□□□ 0.4
PDZRN3-205ENST00000466780 ADGBQ8N7X0 1667 aa17.55■□□□□ 0.4
PDZRN3-205ENST00000466780 PRG4Q92954 1404 aaPredicted RBP17.55■□□□□ 0.4
PDZRN3-205ENST00000466780 EIF4G3O43432 1585 aaKnown RBP17.54■□□□□ 0.4
PDZRN3-205ENST00000466780 PKD2Q13563 968 aa17.54■□□□□ 0.4
PDZRN3-205ENST00000466780 ADGRL2O95490 1459 aa17.53■□□□□ 0.4
PDZRN3-205ENST00000466780 CFDP1Q9UEE9 299 aaPredicted RBP17.52■□□□□ 0.4
PDZRN3-205ENST00000466780 TROQ12816 1431 aaPredicted RBP17.52■□□□□ 0.4
PDZRN3-205ENST00000466780 NBR1Q14596 966 aa17.51■□□□□ 0.39
PDZRN3-205ENST00000466780 UHRF1BP1Q6BDS2 1440 aa17.51■□□□□ 0.39
PDZRN3-205ENST00000466780 GPATCH8Q9UKJ3 1502 aaKnown RBP17.51■□□□□ 0.39
PDZRN3-205ENST00000466780 RALGAPBQ86X10 1494 aa17.5■□□□□ 0.39
PDZRN3-205ENST00000466780 TMC1Q8TDI8 760 aa17.5■□□□□ 0.39
PDZRN3-205ENST00000466780 ROCK2O75116 1388 aaKnown RBP17.5■□□□□ 0.39
PDZRN3-205ENST00000466780 CROCC2H7BZ55 1655 aa17.5■□□□□ 0.39
PDZRN3-205ENST00000466780 LRPPRCP42704 1394 aaKnown RBP17.5■□□□□ 0.39
PDZRN3-205ENST00000466780 IPO9Q96P70 1041 aaKnown RBP17.49■□□□□ 0.39
PDZRN3-205ENST00000466780 ZNF777Q9ULD5 760 aaPredicted RBP17.49■□□□□ 0.39
PDZRN3-205ENST00000466780 ITSN2Q9NZM3 1697 aa17.49■□□□□ 0.39
PDZRN3-205ENST00000466780 KIF15Q9NS87 1388 aa17.47■□□□□ 0.39
PDZRN3-205ENST00000466780 ANP32AP39687 249 aaKnown RBP17.47■□□□□ 0.39
PDZRN3-205ENST00000466780 PLB1Q6P1J6 1458 aa17.46■□□□□ 0.39
PDZRN3-205ENST00000466780 ANKRD30AQ9BXX3 1397 aa17.46■□□□□ 0.39
PDZRN3-205ENST00000466780 ANKRD50Q9ULJ7 1429 aa17.46■□□□□ 0.39
PDZRN3-205ENST00000466780 CARD11Q9BXL7 1154 aa17.46■□□□□ 0.39
PDZRN3-205ENST00000466780 MAGI1Q96QZ7 1491 aaPredicted RBP17.45■□□□□ 0.38
PDZRN3-205ENST00000466780 JPH4Q96JJ6 628 aa17.45■□□□□ 0.38
PDZRN3-205ENST00000466780 ADCY10Q96PN6 1610 aa17.45■□□□□ 0.38
PDZRN3-205ENST00000466780 BRD4O60885 1362 aaPredicted RBP17.44■□□□□ 0.38
PDZRN3-205ENST00000466780 SYNJ2O15056 1496 aa17.44■□□□□ 0.38
PDZRN3-205ENST00000466780 ARHGEF12Q9NZN5 1544 aa17.44■□□□□ 0.38
PDZRN3-205ENST00000466780 CEP170Q5SW79 1584 aa17.43■□□□□ 0.38
PDZRN3-205ENST00000466780 ST20-MTHFSA0A0A6YYL1 179 aa17.43■□□□□ 0.38
PDZRN3-205ENST00000466780 MYBBP1AQ9BQG0 1328 aaKnown RBP17.43■□□□□ 0.38
PDZRN3-205ENST00000466780 RRP1P56182 461 aaKnown RBP17.42■□□□□ 0.38
PDZRN3-205ENST00000466780 CARMIL2Q6F5E8 1435 aa17.42■□□□□ 0.38
PDZRN3-205ENST00000466780 NUP155O75694 1391 aa17.42■□□□□ 0.38
PDZRN3-205ENST00000466780 E9PCH4 1651 aa17.41■□□□□ 0.38
PDZRN3-205ENST00000466780 ZBTB47Q9UFB7 747 aaPredicted RBP17.41■□□□□ 0.38
PDZRN3-205ENST00000466780 RALBP1Q15311 655 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms