RNA–Protein interactions for RNA: ENST00000465882.5

KPNA1-203, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 3

Gene KPNA1, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-203ENST00000465882 FER1L4A9Z1Z3 1794 aa19.07■□□□□ 0.64
KPNA1-203ENST00000465882 EFCAB2Q5VUJ9 269 aa19.07■□□□□ 0.64
KPNA1-203ENST00000465882 ATP10AO60312 1499 aa19.07■□□□□ 0.64
KPNA1-203ENST00000465882 CDK11AQ9UQ88 783 aaPredicted RBP19.06■□□□□ 0.64
KPNA1-203ENST00000465882 MLECQ14165 292 aa19.05■□□□□ 0.64
KPNA1-203ENST00000465882 MYO5CQ9NQX4 1742 aa19.05■□□□□ 0.64
KPNA1-203ENST00000465882 C9orf84Q5VXU9 1444 aa19.04■□□□□ 0.64
KPNA1-203ENST00000465882 PLPPR3Q6T4P5 718 aa19.04■□□□□ 0.64
KPNA1-203ENST00000465882 ARHGEF12Q9NZN5 1544 aa19.04■□□□□ 0.64
KPNA1-203ENST00000465882 UBTFP17480 764 aaKnown RBP19.02■□□□□ 0.64
KPNA1-203ENST00000465882 ARHGAP35Q9NRY4 1499 aa19.02■□□□□ 0.63
KPNA1-203ENST00000465882 ATP1B4Q9UN42 357 aaPredicted RBP19.01■□□□□ 0.63
KPNA1-203ENST00000465882 TROQ12816 1431 aaPredicted RBP19■□□□□ 0.63
KPNA1-203ENST00000465882 ZNF518AQ6AHZ1 1483 aa18.99■□□□□ 0.63
KPNA1-203ENST00000465882 CERKQ8TCT0 537 aa18.98■□□□□ 0.63
KPNA1-203ENST00000465882 KIF14Q15058 1648 aa18.98■□□□□ 0.63
KPNA1-203ENST00000465882 KDM5CP41229 1560 aa18.97■□□□□ 0.63
KPNA1-203ENST00000465882 SETD1BQ9UPS6 1966 aaKnown RBP18.97■□□□□ 0.63
KPNA1-203ENST00000465882 PREX1Q8TCU6 1659 aa18.96■□□□□ 0.63
KPNA1-203ENST00000465882 CLIP1P30622 1438 aa18.96■□□□□ 0.63
KPNA1-203ENST00000465882 ARHGAP5Q13017 1502 aa18.95■□□□□ 0.62
KPNA1-203ENST00000465882 AFAP1Q8N556 730 aa18.94■□□□□ 0.62
KPNA1-203ENST00000465882 REREQ9P2R6 1566 aa18.93■□□□□ 0.62
KPNA1-203ENST00000465882 CEBPAP49715 358 aaPredicted RBP18.92■□□□□ 0.62
KPNA1-203ENST00000465882 EHMT2Q96KQ7 1210 aa18.91■□□□□ 0.62
KPNA1-203ENST00000465882 MLH3Q9UHC1 1453 aa18.9■□□□□ 0.62
KPNA1-203ENST00000465882 DIP2CQ9Y2E4 1556 aa18.9■□□□□ 0.62
KPNA1-203ENST00000465882 DMRT2Q9Y5R5 561 aa18.9■□□□□ 0.62
KPNA1-203ENST00000465882 LRRIQ1Q96JM4 1722 aa18.9■□□□□ 0.62
KPNA1-203ENST00000465882 CDC42BPBQ9Y5S2 1711 aa18.89■□□□□ 0.61
KPNA1-203ENST00000465882 UHRF1BP1Q6BDS2 1440 aa18.88■□□□□ 0.61
KPNA1-203ENST00000465882 AGLP35573 1532 aa18.87■□□□□ 0.61
KPNA1-203ENST00000465882 STRCQ7RTU9 1775 aa18.87■□□□□ 0.61
KPNA1-203ENST00000465882 MYT1LQ9UL68 1186 aa18.87■□□□□ 0.61
KPNA1-203ENST00000465882 PREX2Q70Z35 1606 aa18.85■□□□□ 0.61
KPNA1-203ENST00000465882 ABCA6Q8N139 1617 aa18.85■□□□□ 0.61
KPNA1-203ENST00000465882 ABCC1P33527 1531 aa18.84■□□□□ 0.61
KPNA1-203ENST00000465882 CCDC18Q5T9S5 1454 aa18.84■□□□□ 0.61
KPNA1-203ENST00000465882 CASKIN1Q8WXD9 1431 aa18.84■□□□□ 0.61
KPNA1-203ENST00000465882 CHIC1Q5VXU3 224 aa18.84■□□□□ 0.61
KPNA1-203ENST00000465882 TRAPPC8Q9Y2L5 1435 aa18.83■□□□□ 0.61
KPNA1-203ENST00000465882 C3P01024 1663 aa18.82■□□□□ 0.6
KPNA1-203ENST00000465882 ITSN2Q9NZM3 1697 aa18.82■□□□□ 0.6
KPNA1-203ENST00000465882 ESF1Q9H501 851 aaKnown RBP18.8■□□□□ 0.6
KPNA1-203ENST00000465882 PTPRTO14522 1441 aa18.8■□□□□ 0.6
KPNA1-203ENST00000465882 KIDINS220Q9ULH0 1771 aa18.79■□□□□ 0.6
KPNA1-203ENST00000465882 CNTLNQ9NXG0 1405 aa18.79■□□□□ 0.6
KPNA1-203ENST00000465882 CDC42BPAQ5VT25 1732 aa18.78■□□□□ 0.6
KPNA1-203ENST00000465882 FYCO1Q9BQS8 1478 aa18.74■□□□□ 0.59
KPNA1-203ENST00000465882 SAMD9LQ8IVG5 1584 aa18.73■□□□□ 0.59
KPNA1-203ENST00000465882 NPATQ14207 1427 aa18.72■□□□□ 0.59
KPNA1-203ENST00000465882 MROH2AA6NES4 1674 aa18.71■□□□□ 0.59
KPNA1-203ENST00000465882 NCOA1Q15788 1441 aa18.71■□□□□ 0.59
KPNA1-203ENST00000465882 GPATCH8Q9UKJ3 1502 aaKnown RBP18.7■□□□□ 0.58
KPNA1-203ENST00000465882 ZNF777Q9ULD5 760 aaPredicted RBP18.69■□□□□ 0.58
KPNA1-203ENST00000465882 LTBP4Q8N2S1 1624 aa18.69■□□□□ 0.58
KPNA1-203ENST00000465882 IQSEC2Q5JU85 1478 aa18.69■□□□□ 0.58
KPNA1-203ENST00000465882 SPAG9O60271 1321 aaKnown RBP18.69■□□□□ 0.58
KPNA1-203ENST00000465882 KIAA1107Q9UPP5 1409 aa18.68■□□□□ 0.58
KPNA1-203ENST00000465882 SYCP2Q9BX26 1530 aa18.68■□□□□ 0.58
KPNA1-203ENST00000465882 ZMYM3Q14202 1370 aa18.68■□□□□ 0.58
KPNA1-203ENST00000465882 PLEKHH2Q8IVE3 1493 aa18.67■□□□□ 0.58
KPNA1-203ENST00000465882 DISP3Q9P2K9 1392 aa18.66■□□□□ 0.58
KPNA1-203ENST00000465882 HNRNPMP52272 730 aaKnown RBP eCLIP18.65■□□□□ 0.58
KPNA1-203ENST00000465882 ATP7AQ04656 1500 aa18.64■□□□□ 0.58
KPNA1-203ENST00000465882 CAMSAP1Q5T5Y3 1602 aa18.64■□□□□ 0.57
KPNA1-203ENST00000465882 SUPT6HQ7KZ85 1726 aaKnown RBP18.64■□□□□ 0.57
KPNA1-203ENST00000465882 CFDP1Q9UEE9 299 aaPredicted RBP18.64■□□□□ 0.57
KPNA1-203ENST00000465882 PLXNC1O60486 1568 aa18.64■□□□□ 0.57
KPNA1-203ENST00000465882 INO80Q9ULG1 1556 aaPredicted RBP18.63■□□□□ 0.57
KPNA1-203ENST00000465882 A2MP01023 1474 aa18.62■□□□□ 0.57
KPNA1-203ENST00000465882 CCNB3Q8WWL7 1395 aa18.61■□□□□ 0.57
KPNA1-203ENST00000465882 ILDR2Q71H61 639 aa18.61■□□□□ 0.57
KPNA1-203ENST00000465882 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
KPNA1-203ENST00000465882 CLTCQ00610 1675 aaKnown RBP18.6■□□□□ 0.57
KPNA1-203ENST00000465882 PLA2R1Q13018 1463 aa18.59■□□□□ 0.57
KPNA1-203ENST00000465882 ZNF142P52746 1687 aaPredicted RBP18.59■□□□□ 0.57
KPNA1-203ENST00000465882 PTPRKQ15262 1439 aa18.58■□□□□ 0.57
KPNA1-203ENST00000465882 SOCS7O14512 581 aa18.58■□□□□ 0.56
KPNA1-203ENST00000465882 PKD2Q13563 968 aa18.58■□□□□ 0.56
KPNA1-203ENST00000465882 NCKAP5LQ9HCH0 1330 aa18.57■□□□□ 0.56
KPNA1-203ENST00000465882 MTUS2Q5JR59 1369 aa18.56■□□□□ 0.56
KPNA1-203ENST00000465882 MYO3AQ8NEV4 1616 aa18.56■□□□□ 0.56
KPNA1-203ENST00000465882 ADGBQ8N7X0 1667 aa18.56■□□□□ 0.56
KPNA1-203ENST00000465882 SPATA31D1Q6ZQQ2 1576 aa18.55■□□□□ 0.56
KPNA1-203ENST00000465882 CEP170BQ9Y4F5 1589 aaPredicted RBP18.55■□□□□ 0.56
KPNA1-203ENST00000465882 TCOF1Q13428 1488 aaKnown RBP18.55■□□□□ 0.56
KPNA1-203ENST00000465882 GGT6Q6P531 493 aa18.55■□□□□ 0.56
KPNA1-203ENST00000465882 RTEL1-TNFRSF6BF6WH68 1400 aa18.53■□□□□ 0.56
KPNA1-203ENST00000465882 MBD5Q9P267 1494 aa18.52■□□□□ 0.56
KPNA1-203ENST00000465882 ZNF335Q9H4Z2 1342 aaPredicted RBP18.52■□□□□ 0.56
KPNA1-203ENST00000465882 TIAM1Q13009 1591 aa18.51■□□□□ 0.55
KPNA1-203ENST00000465882 ZNF644Q9H582 1327 aaPredicted RBP18.5■□□□□ 0.55
KPNA1-203ENST00000465882 EHBP1L1Q8N3D4 1523 aa18.49■□□□□ 0.55
KPNA1-203ENST00000465882 DHX29Q7Z478 1369 aaKnown RBP18.49■□□□□ 0.55
KPNA1-203ENST00000465882 A2ML1A8K2U0 1454 aa18.49■□□□□ 0.55
KPNA1-203ENST00000465882 CEP162Q5TB80 1403 aa18.49■□□□□ 0.55
KPNA1-203ENST00000465882 UBAP1LF5GYI3 381 aa18.47■□□□□ 0.55
KPNA1-203ENST00000465882 DNMT1P26358 1616 aaKnown RBP18.45■□□□□ 0.54
KPNA1-203ENST00000465882 FAM135AQ9P2D6 1515 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms