RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 POGZQ7Z3K3 1410 aa19.85■□□□□ 0.77
CNOT4-208ENST00000465721 LRRIQ1Q96JM4 1722 aa19.82■□□□□ 0.76
CNOT4-208ENST00000465721 KIF14Q15058 1648 aa19.81■□□□□ 0.76
CNOT4-208ENST00000465721 PLCH2O75038 1416 aa19.81■□□□□ 0.76
CNOT4-208ENST00000465721 ARHGEF12Q9NZN5 1544 aa19.81■□□□□ 0.76
CNOT4-208ENST00000465721 PREX1Q8TCU6 1659 aa19.8■□□□□ 0.76
CNOT4-208ENST00000465721 SCAPERQ9BY12 1400 aa19.78■□□□□ 0.76
CNOT4-208ENST00000465721 HSPA2P54652 639 aa19.76■□□□□ 0.75
CNOT4-208ENST00000465721 KDM5CP41229 1560 aa19.75■□□□□ 0.75
CNOT4-208ENST00000465721 ARHGAP35Q9NRY4 1499 aa19.75■□□□□ 0.75
CNOT4-208ENST00000465721 C9orf84Q5VXU9 1444 aa19.75■□□□□ 0.75
CNOT4-208ENST00000465721 ATP10AO60312 1499 aa19.74■□□□□ 0.75
CNOT4-208ENST00000465721 FMN1Q68DA7 1419 aa19.74■□□□□ 0.75
CNOT4-208ENST00000465721 CDC42BPBQ9Y5S2 1711 aa19.73■□□□□ 0.75
CNOT4-208ENST00000465721 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
CNOT4-208ENST00000465721 DIP2CQ9Y2E4 1556 aa19.7■□□□□ 0.74
CNOT4-208ENST00000465721 STRCQ7RTU9 1775 aa19.7■□□□□ 0.74
CNOT4-208ENST00000465721 MLECQ14165 292 aa19.7■□□□□ 0.74
CNOT4-208ENST00000465721 ZNF518AQ6AHZ1 1483 aa19.7■□□□□ 0.74
CNOT4-208ENST00000465721 SETD1BQ9UPS6 1966 aaKnown RBP19.7■□□□□ 0.74
CNOT4-208ENST00000465721 ABCA6Q8N139 1617 aa19.69■□□□□ 0.74
CNOT4-208ENST00000465721 ARHGAP5Q13017 1502 aa19.69■□□□□ 0.74
CNOT4-208ENST00000465721 REREQ9P2R6 1566 aa19.69■□□□□ 0.74
CNOT4-208ENST00000465721 PREX2Q70Z35 1606 aa19.69■□□□□ 0.74
CNOT4-208ENST00000465721 TROQ12816 1431 aaPredicted RBP19.68■□□□□ 0.74
CNOT4-208ENST00000465721 ITSN2Q9NZM3 1697 aa19.66■□□□□ 0.74
CNOT4-208ENST00000465721 C3P01024 1663 aa19.65■□□□□ 0.74
CNOT4-208ENST00000465721 EFCAB2Q5VUJ9 269 aa19.65■□□□□ 0.74
CNOT4-208ENST00000465721 ABCC1P33527 1531 aa19.63■□□□□ 0.73
CNOT4-208ENST00000465721 CDC42BPAQ5VT25 1732 aa19.62■□□□□ 0.73
CNOT4-208ENST00000465721 CLIP1P30622 1438 aa19.62■□□□□ 0.73
CNOT4-208ENST00000465721 CERKQ8TCT0 537 aa19.61■□□□□ 0.73
CNOT4-208ENST00000465721 ATP1B4Q9UN42 357 aaPredicted RBP19.6■□□□□ 0.73
CNOT4-208ENST00000465721 CDK11AQ9UQ88 783 aaPredicted RBP19.6■□□□□ 0.73
CNOT4-208ENST00000465721 MLH3Q9UHC1 1453 aa19.6■□□□□ 0.73
CNOT4-208ENST00000465721 KIDINS220Q9ULH0 1771 aa19.6■□□□□ 0.73
CNOT4-208ENST00000465721 UBTFP17480 764 aaKnown RBP19.59■□□□□ 0.73
CNOT4-208ENST00000465721 AGLP35573 1532 aa19.58■□□□□ 0.73
CNOT4-208ENST00000465721 EHMT2Q96KQ7 1210 aa19.58■□□□□ 0.72
CNOT4-208ENST00000465721 CEBPAP49715 358 aaPredicted RBP19.57■□□□□ 0.72
CNOT4-208ENST00000465721 AFAP1Q8N556 730 aa19.57■□□□□ 0.72
CNOT4-208ENST00000465721 UHRF1BP1Q6BDS2 1440 aa19.57■□□□□ 0.72
CNOT4-208ENST00000465721 CCDC18Q5T9S5 1454 aa19.55■□□□□ 0.72
CNOT4-208ENST00000465721 TRAPPC8Q9Y2L5 1435 aa19.54■□□□□ 0.72
CNOT4-208ENST00000465721 MROH2AA6NES4 1674 aa19.52■□□□□ 0.72
CNOT4-208ENST00000465721 CASKIN1Q8WXD9 1431 aa19.52■□□□□ 0.72
CNOT4-208ENST00000465721 SAMD9LQ8IVG5 1584 aa19.49■□□□□ 0.71
CNOT4-208ENST00000465721 FYCO1Q9BQS8 1478 aa19.48■□□□□ 0.71
CNOT4-208ENST00000465721 PTPRTO14522 1441 aa19.47■□□□□ 0.71
CNOT4-208ENST00000465721 SUPT6HQ7KZ85 1726 aaKnown RBP19.46■□□□□ 0.71
CNOT4-208ENST00000465721 SYCP2Q9BX26 1530 aa19.46■□□□□ 0.71
CNOT4-208ENST00000465721 LTBP4Q8N2S1 1624 aa19.45■□□□□ 0.7
CNOT4-208ENST00000465721 MYT1LQ9UL68 1186 aa19.45■□□□□ 0.7
CNOT4-208ENST00000465721 DMRT2Q9Y5R5 561 aa19.45■□□□□ 0.7
CNOT4-208ENST00000465721 CNTLNQ9NXG0 1405 aa19.44■□□□□ 0.7
CNOT4-208ENST00000465721 INO80Q9ULG1 1556 aaPredicted RBP19.44■□□□□ 0.7
CNOT4-208ENST00000465721 ZNF142P52746 1687 aaPredicted RBP19.43■□□□□ 0.7
CNOT4-208ENST00000465721 PLXNC1O60486 1568 aa19.43■□□□□ 0.7
CNOT4-208ENST00000465721 NCOA1Q15788 1441 aa19.42■□□□□ 0.7
CNOT4-208ENST00000465721 CLTCQ00610 1675 aaKnown RBP19.42■□□□□ 0.7
CNOT4-208ENST00000465721 ATP7AQ04656 1500 aa19.41■□□□□ 0.7
CNOT4-208ENST00000465721 MYO3AQ8NEV4 1616 aa19.4■□□□□ 0.7
CNOT4-208ENST00000465721 GPATCH8Q9UKJ3 1502 aaKnown RBP19.39■□□□□ 0.69
CNOT4-208ENST00000465721 CAMSAP1Q5T5Y3 1602 aa19.39■□□□□ 0.69
CNOT4-208ENST00000465721 NPATQ14207 1427 aa19.38■□□□□ 0.69
CNOT4-208ENST00000465721 IQSEC2Q5JU85 1478 aa19.38■□□□□ 0.69
CNOT4-208ENST00000465721 SPATA31D1Q6ZQQ2 1576 aa19.38■□□□□ 0.69
CNOT4-208ENST00000465721 ESF1Q9H501 851 aaKnown RBP19.35■□□□□ 0.69
CNOT4-208ENST00000465721 ADGBQ8N7X0 1667 aa19.35■□□□□ 0.69
CNOT4-208ENST00000465721 DISP3Q9P2K9 1392 aa19.33■□□□□ 0.69
CNOT4-208ENST00000465721 CEP170BQ9Y4F5 1589 aaPredicted RBP19.32■□□□□ 0.68
CNOT4-208ENST00000465721 PLEKHH2Q8IVE3 1493 aa19.32■□□□□ 0.68
CNOT4-208ENST00000465721 KIAA1107Q9UPP5 1409 aa19.32■□□□□ 0.68
CNOT4-208ENST00000465721 ZMYM3Q14202 1370 aa19.31■□□□□ 0.68
CNOT4-208ENST00000465721 SPAG9O60271 1321 aaKnown RBP19.3■□□□□ 0.68
CNOT4-208ENST00000465721 A2MP01023 1474 aa19.3■□□□□ 0.68
CNOT4-208ENST00000465721 ILDR2Q71H61 639 aa19.3■□□□□ 0.68
CNOT4-208ENST00000465721 ZNF777Q9ULD5 760 aaPredicted RBP19.3■□□□□ 0.68
CNOT4-208ENST00000465721 TIAM1Q13009 1591 aa19.3■□□□□ 0.68
CNOT4-208ENST00000465721 PLA2R1Q13018 1463 aa19.28■□□□□ 0.68
CNOT4-208ENST00000465721 PTPRKQ15262 1439 aa19.27■□□□□ 0.68
CNOT4-208ENST00000465721 HNRNPMP52272 730 aaKnown RBP eCLIP19.27■□□□□ 0.68
CNOT4-208ENST00000465721 TCOF1Q13428 1488 aaKnown RBP19.27■□□□□ 0.67
CNOT4-208ENST00000465721 POLR1AO95602 1720 aaPredicted RBP19.25■□□□□ 0.67
CNOT4-208ENST00000465721 CCNB3Q8WWL7 1395 aa19.24■□□□□ 0.67
CNOT4-208ENST00000465721 EHBP1L1Q8N3D4 1523 aa19.24■□□□□ 0.67
CNOT4-208ENST00000465721 CFDP1Q9UEE9 299 aaPredicted RBP19.22■□□□□ 0.67
CNOT4-208ENST00000465721 DNMT1P26358 1616 aaKnown RBP19.22■□□□□ 0.67
CNOT4-208ENST00000465721 SOCS7O14512 581 aa19.21■□□□□ 0.67
CNOT4-208ENST00000465721 MBD5Q9P267 1494 aa19.21■□□□□ 0.67
CNOT4-208ENST00000465721 ZNF335Q9H4Z2 1342 aaPredicted RBP19.21■□□□□ 0.67
CNOT4-208ENST00000465721 NCKAP5LQ9HCH0 1330 aa19.21■□□□□ 0.67
CNOT4-208ENST00000465721 MTUS2Q5JR59 1369 aa19.2■□□□□ 0.66
CNOT4-208ENST00000465721 A2ML1A8K2U0 1454 aa19.18■□□□□ 0.66
CNOT4-208ENST00000465721 NEURL4Q96JN8 1562 aa19.18■□□□□ 0.66
CNOT4-208ENST00000465721 FAM135AQ9P2D6 1515 aa19.16■□□□□ 0.66
CNOT4-208ENST00000465721 RTEL1-TNFRSF6BF6WH68 1400 aa19.16■□□□□ 0.66
CNOT4-208ENST00000465721 PKD2Q13563 968 aa19.15■□□□□ 0.66
CNOT4-208ENST00000465721 GGT6Q6P531 493 aa19.15■□□□□ 0.66
CNOT4-208ENST00000465721 ZNF644Q9H582 1327 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms