RNA–Protein interactions for RNA: ENST00000465085.2

ABCD4-203, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 1,123 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-203ENST00000465085 SCAPERQ9BY12 1400 aa20.87■□□□□ 0.93
ABCD4-203ENST00000465085 KIF14Q15058 1648 aa20.86■□□□□ 0.93
ABCD4-203ENST00000465085 UBTFP17480 764 aaKnown RBP20.85■□□□□ 0.93
ABCD4-203ENST00000465085 FBXO41Q8TF61 875 aa20.84■□□□□ 0.93
ABCD4-203ENST00000465085 LRRIQ1Q96JM4 1722 aa20.84■□□□□ 0.93
ABCD4-203ENST00000465085 CDK11AQ9UQ88 783 aaPredicted RBP20.82■□□□□ 0.92
ABCD4-203ENST00000465085 TROQ12816 1431 aaPredicted RBP20.8■□□□□ 0.92
ABCD4-203ENST00000465085 ATP10AO60312 1499 aa20.8■□□□□ 0.92
ABCD4-203ENST00000465085 ARHGEF12Q9NZN5 1544 aa20.79■□□□□ 0.92
ABCD4-203ENST00000465085 EFCAB2Q5VUJ9 269 aa20.79■□□□□ 0.92
ABCD4-203ENST00000465085 C9orf84Q5VXU9 1444 aa20.78■□□□□ 0.92
ABCD4-203ENST00000465085 KDM5CP41229 1560 aa20.78■□□□□ 0.92
ABCD4-203ENST00000465085 ZNF518AQ6AHZ1 1483 aa20.78■□□□□ 0.92
ABCD4-203ENST00000465085 EHMT2Q96KQ7 1210 aa20.78■□□□□ 0.92
ABCD4-203ENST00000465085 ATP1B4Q9UN42 357 aaPredicted RBP20.78■□□□□ 0.92
ABCD4-203ENST00000465085 ARHGAP5Q13017 1502 aa20.77■□□□□ 0.92
ABCD4-203ENST00000465085 CLIP1P30622 1438 aa20.77■□□□□ 0.91
ABCD4-203ENST00000465085 CHIC1Q5VXU3 224 aa20.75■□□□□ 0.91
ABCD4-203ENST00000465085 CDC42BPBQ9Y5S2 1711 aa20.75■□□□□ 0.91
ABCD4-203ENST00000465085 MLECQ14165 292 aa20.74■□□□□ 0.91
ABCD4-203ENST00000465085 PREX1Q8TCU6 1659 aa20.73■□□□□ 0.91
ABCD4-203ENST00000465085 HSPA2P54652 639 aa20.73■□□□□ 0.91
ABCD4-203ENST00000465085 PREX2Q70Z35 1606 aa20.72■□□□□ 0.91
ABCD4-203ENST00000465085 PLPPR3Q6T4P5 718 aa20.71■□□□□ 0.91
ABCD4-203ENST00000465085 REREQ9P2R6 1566 aa20.71■□□□□ 0.91
ABCD4-203ENST00000465085 DIP2CQ9Y2E4 1556 aa20.71■□□□□ 0.91
ABCD4-203ENST00000465085 CCDC18Q5T9S5 1454 aa20.69■□□□□ 0.9
ABCD4-203ENST00000465085 ABCA6Q8N139 1617 aa20.68■□□□□ 0.9
ABCD4-203ENST00000465085 CASKIN1Q8WXD9 1431 aa20.68■□□□□ 0.9
ABCD4-203ENST00000465085 ABCC1P33527 1531 aa20.68■□□□□ 0.9
ABCD4-203ENST00000465085 ITSN2Q9NZM3 1697 aa20.67■□□□□ 0.9
ABCD4-203ENST00000465085 AFAP1Q8N556 730 aa20.66■□□□□ 0.9
ABCD4-203ENST00000465085 MLH3Q9UHC1 1453 aa20.66■□□□□ 0.9
ABCD4-203ENST00000465085 SETD1BQ9UPS6 1966 aaKnown RBP20.66■□□□□ 0.9
ABCD4-203ENST00000465085 CDC42BPAQ5VT25 1732 aa20.65■□□□□ 0.9
ABCD4-203ENST00000465085 AGLP35573 1532 aa20.62■□□□□ 0.89
ABCD4-203ENST00000465085 FYCO1Q9BQS8 1478 aa20.61■□□□□ 0.89
ABCD4-203ENST00000465085 KIDINS220Q9ULH0 1771 aa20.6■□□□□ 0.89
ABCD4-203ENST00000465085 C3P01024 1663 aa20.6■□□□□ 0.89
ABCD4-203ENST00000465085 TRAPPC8Q9Y2L5 1435 aa20.6■□□□□ 0.89
ABCD4-203ENST00000465085 STRCQ7RTU9 1775 aa20.59■□□□□ 0.89
ABCD4-203ENST00000465085 CEBPAP49715 358 aaPredicted RBP20.59■□□□□ 0.89
ABCD4-203ENST00000465085 MYT1LQ9UL68 1186 aa20.58■□□□□ 0.89
ABCD4-203ENST00000465085 UHRF1BP1Q6BDS2 1440 aa20.56■□□□□ 0.88
ABCD4-203ENST00000465085 CERKQ8TCT0 537 aa20.55■□□□□ 0.88
ABCD4-203ENST00000465085 SAMD9LQ8IVG5 1584 aa20.54■□□□□ 0.88
ABCD4-203ENST00000465085 SYCP2Q9BX26 1530 aa20.5■□□□□ 0.87
ABCD4-203ENST00000465085 CNTLNQ9NXG0 1405 aa20.5■□□□□ 0.87
ABCD4-203ENST00000465085 GPATCH8Q9UKJ3 1502 aaKnown RBP20.49■□□□□ 0.87
ABCD4-203ENST00000465085 MROH2AA6NES4 1674 aa20.49■□□□□ 0.87
ABCD4-203ENST00000465085 DMRT2Q9Y5R5 561 aa20.49■□□□□ 0.87
ABCD4-203ENST00000465085 ESF1Q9H501 851 aaKnown RBP20.46■□□□□ 0.87
ABCD4-203ENST00000465085 INO80Q9ULG1 1556 aaPredicted RBP20.46■□□□□ 0.87
ABCD4-203ENST00000465085 SUPT6HQ7KZ85 1726 aaKnown RBP20.44■□□□□ 0.86
ABCD4-203ENST00000465085 ATP7AQ04656 1500 aa20.44■□□□□ 0.86
ABCD4-203ENST00000465085 PTPRTO14522 1441 aa20.44■□□□□ 0.86
ABCD4-203ENST00000465085 KIAA1107Q9UPP5 1409 aa20.44■□□□□ 0.86
ABCD4-203ENST00000465085 PLEKHH2Q8IVE3 1493 aa20.43■□□□□ 0.86
ABCD4-203ENST00000465085 PLXNC1O60486 1568 aa20.43■□□□□ 0.86
ABCD4-203ENST00000465085 ZNF777Q9ULD5 760 aaPredicted RBP20.43■□□□□ 0.86
ABCD4-203ENST00000465085 SPAG9O60271 1321 aaKnown RBP20.42■□□□□ 0.86
ABCD4-203ENST00000465085 NPATQ14207 1427 aa20.41■□□□□ 0.86
ABCD4-203ENST00000465085 NCOA1Q15788 1441 aa20.39■□□□□ 0.85
ABCD4-203ENST00000465085 CLTCQ00610 1675 aaKnown RBP20.38■□□□□ 0.85
ABCD4-203ENST00000465085 CCNB3Q8WWL7 1395 aa20.38■□□□□ 0.85
ABCD4-203ENST00000465085 HNRNPMP52272 730 aaKnown RBP eCLIP20.38■□□□□ 0.85
ABCD4-203ENST00000465085 ADGBQ8N7X0 1667 aa20.38■□□□□ 0.85
ABCD4-203ENST00000465085 CFDP1Q9UEE9 299 aaPredicted RBP20.37■□□□□ 0.85
ABCD4-203ENST00000465085 A2MP01023 1474 aa20.37■□□□□ 0.85
ABCD4-203ENST00000465085 MTUS2Q5JR59 1369 aa20.36■□□□□ 0.85
ABCD4-203ENST00000465085 ZNF142P52746 1687 aaPredicted RBP20.36■□□□□ 0.85
ABCD4-203ENST00000465085 TIAM1Q13009 1591 aa20.36■□□□□ 0.85
ABCD4-203ENST00000465085 LTBP4Q8N2S1 1624 aa20.35■□□□□ 0.85
ABCD4-203ENST00000465085 EHBP1L1Q8N3D4 1523 aa20.35■□□□□ 0.85
ABCD4-203ENST00000465085 CAMSAP1Q5T5Y3 1602 aa20.35■□□□□ 0.85
ABCD4-203ENST00000465085 MYO3AQ8NEV4 1616 aa20.35■□□□□ 0.85
ABCD4-203ENST00000465085 ZMYM3Q14202 1370 aa20.34■□□□□ 0.85
ABCD4-203ENST00000465085 IQSEC2Q5JU85 1478 aa20.31■□□□□ 0.84
ABCD4-203ENST00000465085 MBD5Q9P267 1494 aa20.3■□□□□ 0.84
ABCD4-203ENST00000465085 CEP170BQ9Y4F5 1589 aaPredicted RBP20.29■□□□□ 0.84
ABCD4-203ENST00000465085 PTPRKQ15262 1439 aa20.28■□□□□ 0.84
ABCD4-203ENST00000465085 CEP162Q5TB80 1403 aa20.28■□□□□ 0.84
ABCD4-203ENST00000465085 PLA2R1Q13018 1463 aa20.27■□□□□ 0.84
ABCD4-203ENST00000465085 RTEL1-TNFRSF6BF6WH68 1400 aa20.26■□□□□ 0.83
ABCD4-203ENST00000465085 ZNF644Q9H582 1327 aaPredicted RBP20.26■□□□□ 0.83
ABCD4-203ENST00000465085 PPP6R1Q9UPN7 881 aa20.25■□□□□ 0.83
ABCD4-203ENST00000465085 GGT6Q6P531 493 aa20.24■□□□□ 0.83
ABCD4-203ENST00000465085 TCOF1Q13428 1488 aaKnown RBP20.24■□□□□ 0.83
ABCD4-203ENST00000465085 FAM135AQ9P2D6 1515 aa20.21■□□□□ 0.83
ABCD4-203ENST00000465085 CCDC141Q6ZP82 1450 aa20.2■□□□□ 0.82
ABCD4-203ENST00000465085 NCKAP5LQ9HCH0 1330 aa20.2■□□□□ 0.82
ABCD4-203ENST00000465085 DHX29Q7Z478 1369 aaKnown RBP20.2■□□□□ 0.82
ABCD4-203ENST00000465085 CAMSAP2Q08AD1 1489 aa20.19■□□□□ 0.82
ABCD4-203ENST00000465085 NCOA2Q15596 1464 aa20.19■□□□□ 0.82
ABCD4-203ENST00000465085 PKD2Q13563 968 aa20.19■□□□□ 0.82
ABCD4-203ENST00000465085 A2ML1A8K2U0 1454 aa20.18■□□□□ 0.82
ABCD4-203ENST00000465085 DNMT1P26358 1616 aaKnown RBP20.18■□□□□ 0.82
ABCD4-203ENST00000465085 DISP3Q9P2K9 1392 aa20.18■□□□□ 0.82
ABCD4-203ENST00000465085 SPATA31D1Q6ZQQ2 1576 aa20.17■□□□□ 0.82
ABCD4-203ENST00000465085 POLR1AO95602 1720 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms