RNA–Protein interactions for RNA: ENST00000465051.1

CEACAM1-209, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 2

Gene CEACAM1, Length 321 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-209ENST00000465051 NLRP6P59044 892 aa12.13□□□□□ -0.47
CEACAM1-209ENST00000465051 KRTAP3-3Q9BYR6 98 aa12.13□□□□□ -0.47
CEACAM1-209ENST00000465051 KRTAP3-2Q9BYR7 98 aa12.13□□□□□ -0.47
CEACAM1-209ENST00000465051 ECM2O94769 699 aaPredicted RBP12.11□□□□□ -0.47
CEACAM1-209ENST00000465051 STK25O00506 426 aa12.1□□□□□ -0.47
CEACAM1-209ENST00000465051 VARS2Q5ST30 1063 aaKnown RBP12.06□□□□□ -0.48
CEACAM1-209ENST00000465051 FBXO22Q8NEZ5 403 aa12.05□□□□□ -0.48
CEACAM1-209ENST00000465051 ZSWIM6Q9HCJ5 1215 aa12.05□□□□□ -0.48
CEACAM1-209ENST00000465051 MFRPQ9BY79 579 aa12.02□□□□□ -0.49
CEACAM1-209ENST00000465051 GPR153Q6NV75 609 aa11.99□□□□□ -0.49
CEACAM1-209ENST00000465051 RGL2O15211 777 aa11.98□□□□□ -0.49
CEACAM1-209ENST00000465051 ARSIQ5FYB1 569 aa11.98□□□□□ -0.49
CEACAM1-209ENST00000465051 PKD2Q13563 968 aa11.97□□□□□ -0.49
CEACAM1-209ENST00000465051 ZNF687Q8N1G0 1237 aa11.92□□□□□ -0.5
CEACAM1-209ENST00000465051 KHSRPQ92945 711 aaKnown RBP eCLIP11.92□□□□□ -0.57e-8■■□□□ 11.4
CEACAM1-209ENST00000465051 C2orf72A6NCS6 295 aa11.91□□□□□ -0.5
CEACAM1-209ENST00000465051 TMC2Q8TDI7 906 aa11.88□□□□□ -0.51
CEACAM1-209ENST00000465051 ZNF316A6NFI3 1004 aaPredicted RBP11.87□□□□□ -0.51
CEACAM1-209ENST00000465051 KIF3CO14782 793 aa11.86□□□□□ -0.51
CEACAM1-209ENST00000465051 RNF166Q96A37 237 aaPredicted RBP11.86□□□□□ -0.51
CEACAM1-209ENST00000465051 ANKRD13DQ6ZTN6 518 aa11.84□□□□□ -0.51
CEACAM1-209ENST00000465051 MYT1LQ9UL68 1186 aa11.84□□□□□ -0.51
CEACAM1-209ENST00000465051 NUDT7P0C024 238 aa11.83□□□□□ -0.52
CEACAM1-209ENST00000465051 PPP1R37O75864 691 aa11.81□□□□□ -0.52
CEACAM1-209ENST00000465051 PCDHGA4Q9Y5G9 962 aa11.79□□□□□ -0.52
CEACAM1-209ENST00000465051 SLC34A2O95436 690 aa11.76□□□□□ -0.53
CEACAM1-209ENST00000465051 PTGER2P43116 358 aa11.76□□□□□ -0.53
CEACAM1-209ENST00000465051 LHX6Q9UPM6 363 aa11.76□□□□□ -0.53
CEACAM1-209ENST00000465051 LSM11P83369 360 aaKnown RBP eCLIP11.75□□□□□ -0.53
CEACAM1-209ENST00000465051 HS6ST3Q8IZP7 471 aa11.72□□□□□ -0.53
CEACAM1-209ENST00000465051 CHGAP10645 457 aaKnown RBP11.71□□□□□ -0.53
CEACAM1-209ENST00000465051 PBX2P40425 430 aa11.71□□□□□ -0.53
CEACAM1-209ENST00000465051 AXIN2Q9Y2T1 843 aa11.7□□□□□ -0.54
CEACAM1-209ENST00000465051 PLPP6Q8IY26 295 aa11.66□□□□□ -0.54
CEACAM1-209ENST00000465051 PSDA5PKW4 1024 aaPredicted RBP11.64□□□□□ -0.55
CEACAM1-209ENST00000465051 FOXK1P85037 733 aa11.64□□□□□ -0.55
CEACAM1-209ENST00000465051 GPHNQ9NQX3 736 aaPredicted RBP11.64□□□□□ -0.55
CEACAM1-209ENST00000465051 POTEEQ6S8J3 1075 aa11.63□□□□□ -0.55
CEACAM1-209ENST00000465051 PTCD2Q8WV60 388 aaKnown RBP11.62□□□□□ -0.55
CEACAM1-209ENST00000465051 ARHGAP33O14559 1287 aa11.61□□□□□ -0.55
CEACAM1-209ENST00000465051 DSG2Q14126 1118 aa11.61□□□□□ -0.55
CEACAM1-209ENST00000465051 TBC1D12O60347 775 aa11.6□□□□□ -0.55
CEACAM1-209ENST00000465051 ADGRD1Q6QNK2 874 aa11.57□□□□□ -0.56
CEACAM1-209ENST00000465051 RYDENQ9NUL5 291 aaKnown RBP11.57□□□□□ -0.56
CEACAM1-209ENST00000465051 KDM4FA0A1W2PPD8 638 aa11.56□□□□□ -0.56
CEACAM1-209ENST00000465051 PPP4R3BQ5MIZ7 849 aa11.56□□□□□ -0.56
CEACAM1-209ENST00000465051 NKX1-1Q15270 411 aaPredicted RBP11.55□□□□□ -0.56
CEACAM1-209ENST00000465051 PSEN2P49810 448 aa11.53□□□□□ -0.56
CEACAM1-209ENST00000465051 UPF1Q92900 1129 aaKnown RBP eCLIP11.53□□□□□ -0.56
CEACAM1-209ENST00000465051 DMRTA1Q5VZB9 504 aa11.51□□□□□ -0.57
CEACAM1-209ENST00000465051 KCNH8Q96L42 1107 aa11.51□□□□□ -0.57
CEACAM1-209ENST00000465051 DNAJC5Q9H3Z4 198 aa11.5□□□□□ -0.57
CEACAM1-209ENST00000465051 STAC3Q96MF2 364 aa11.49□□□□□ -0.57
CEACAM1-209ENST00000465051 HCSTQ9UBK5 93 aa11.49□□□□□ -0.57
CEACAM1-209ENST00000465051 TK2O00142 265 aa11.48□□□□□ -0.57
CEACAM1-209ENST00000465051 KCNK17Q96T54 332 aa11.48□□□□□ -0.57
CEACAM1-209ENST00000465051 PPP1R15BQ5SWA1 713 aa11.47□□□□□ -0.57
CEACAM1-209ENST00000465051 OXER1Q8TDS5 423 aa11.46□□□□□ -0.57
CEACAM1-209ENST00000465051 CRISPLD2Q9H0B8 497 aa11.46□□□□□ -0.57
CEACAM1-209ENST00000465051 DCAF8L2P0C7V8 631 aa11.44□□□□□ -0.58
CEACAM1-209ENST00000465051 ZNF454Q8N9F8 522 aa11.44□□□□□ -0.58
CEACAM1-209ENST00000465051 PLA2G2EQ9NZK7 142 aa11.44□□□□□ -0.58
CEACAM1-209ENST00000465051 PDE4AP27815 886 aa11.43□□□□□ -0.58
CEACAM1-209ENST00000465051 HRO43593 1189 aa11.42□□□□□ -0.58
CEACAM1-209ENST00000465051 KCTD12Q96CX2 325 aaKnown RBP11.42□□□□□ -0.58
CEACAM1-209ENST00000465051 NCKAP5LQ9HCH0 1330 aa11.4□□□□□ -0.58
CEACAM1-209ENST00000465051 LARP6Q9BRS8 491 aaKnown RBP11.38□□□□□ -0.59
CEACAM1-209ENST00000465051 GTPBP6O43824 516 aaPredicted RBP11.37□□□□□ -0.59
CEACAM1-209ENST00000465051 VPS9D1Q9Y2B5 631 aa11.36□□□□□ -0.59
CEACAM1-209ENST00000465051 DDX27Q96GQ7 796 aaKnown RBP11.35□□□□□ -0.59
CEACAM1-209ENST00000465051 BCL2L12Q9HB09 334 aa11.35□□□□□ -0.59
CEACAM1-209ENST00000465051 FOSBP53539 338 aa11.34□□□□□ -0.59
CEACAM1-209ENST00000465051 EVI5O60447 810 aa11.33□□□□□ -0.6
CEACAM1-209ENST00000465051 PTPREP23469 700 aa11.33□□□□□ -0.6
CEACAM1-209ENST00000465051 PTPN5P54829 565 aa11.31□□□□□ -0.6
CEACAM1-209ENST00000465051 MAP3K9P80192 1104 aa11.31□□□□□ -0.6
CEACAM1-209ENST00000465051 JPH4Q96JJ6 628 aa11.31□□□□□ -0.6
CEACAM1-209ENST00000465051 ZDHHC16Q969W1 377 aa11.29□□□□□ -0.6
CEACAM1-209ENST00000465051 ANO8Q9HCE9 1232 aaPredicted RBP11.29□□□□□ -0.6
CEACAM1-209ENST00000465051 GOLGA8CPA6NN73 597 aa11.28□□□□□ -0.6
CEACAM1-209ENST00000465051 SLC4A5Q9BY07 1137 aa11.28□□□□□ -0.6
CEACAM1-209ENST00000465051 ADAM33Q9BZ11 813 aa11.26□□□□□ -0.61
CEACAM1-209ENST00000465051 MFSD10Q14728 455 aa11.25□□□□□ -0.61
CEACAM1-209ENST00000465051 MRPL50Q8N5N7 158 aaKnown RBP11.25□□□□□ -0.61
CEACAM1-209ENST00000465051 ZBED2Q9BTP6 218 aa11.25□□□□□ -0.61
CEACAM1-209ENST00000465051 EMILIN3Q9NT22 766 aa11.23□□□□□ -0.61
CEACAM1-209ENST00000465051 WNT2BQ93097 391 aa11.22□□□□□ -0.61
CEACAM1-209ENST00000465051 NBPF3Q9H094 633 aa11.22□□□□□ -0.61
CEACAM1-209ENST00000465051 BHMG1C9JSJ3 638 aaPredicted RBP11.21□□□□□ -0.61
CEACAM1-209ENST00000465051 THSD4Q6ZMP0 1018 aa11.2□□□□□ -0.62
CEACAM1-209ENST00000465051 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
CEACAM1-209ENST00000465051 PCDHGA10Q9Y5H3 936 aa11.18□□□□□ -0.62
CEACAM1-209ENST00000465051 PPP1R3GB7ZBB8 358 aa11.16□□□□□ -0.62
CEACAM1-209ENST00000465051 TYW1BQ6NUM6 668 aa11.15□□□□□ -0.62
CEACAM1-209ENST00000465051 PROX2Q3B8N5 592 aa11.14□□□□□ -0.63
CEACAM1-209ENST00000465051 FBXW7Q969H0 707 aa11.14□□□□□ -0.63
CEACAM1-209ENST00000465051 PHF14O94880 888 aa11.12□□□□□ -0.63
CEACAM1-209ENST00000465051 COL9A1P20849 921 aa11.12□□□□□ -0.63
CEACAM1-209ENST00000465051 RABGEF1Q9UJ41 708 aa11.12□□□□□ -0.63
CEACAM1-209ENST00000465051 DPYSL4O14531 572 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms