RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 MLECQ14165 292 aa26.31■■□□□ 1.8
SND1-203ENST00000463020 MAGI2Q86UL8 1455 aa26.28■■□□□ 1.8
SND1-203ENST00000463020 KIF14Q15058 1648 aa26.27■■□□□ 1.8
SND1-203ENST00000463020 ARHGAP35Q9NRY4 1499 aa26.26■■□□□ 1.79
SND1-203ENST00000463020 FER1L4A9Z1Z3 1794 aa26.25■■□□□ 1.79
SND1-203ENST00000463020 ATP1B4Q9UN42 357 aaPredicted RBP26.22■■□□□ 1.79
SND1-203ENST00000463020 ARHGEF12Q9NZN5 1544 aa26.22■■□□□ 1.79
SND1-203ENST00000463020 MYO5CQ9NQX4 1742 aa26.2■■□□□ 1.79
SND1-203ENST00000463020 ATP10AO60312 1499 aa26.19■■□□□ 1.78
SND1-203ENST00000463020 LRRIQ1Q96JM4 1722 aa26.19■■□□□ 1.78
SND1-203ENST00000463020 C9orf84Q5VXU9 1444 aa26.17■■□□□ 1.78
SND1-203ENST00000463020 UBTFP17480 764 aaKnown RBP26.17■■□□□ 1.78
SND1-203ENST00000463020 FMN1Q68DA7 1419 aa26.16■■□□□ 1.78
SND1-203ENST00000463020 CEBPAP49715 358 aaPredicted RBP26.16■■□□□ 1.78
SND1-203ENST00000463020 EFCAB2Q5VUJ9 269 aa26.14■■□□□ 1.78
SND1-203ENST00000463020 AFAP1Q8N556 730 aa26.13■■□□□ 1.77
SND1-203ENST00000463020 KDM5CP41229 1560 aa26.12■■□□□ 1.77
SND1-203ENST00000463020 TROQ12816 1431 aaPredicted RBP26.12■■□□□ 1.77
SND1-203ENST00000463020 ARHGAP5Q13017 1502 aa26.11■■□□□ 1.77
SND1-203ENST00000463020 DIP2CQ9Y2E4 1556 aa26.09■■□□□ 1.77
SND1-203ENST00000463020 ZNF518AQ6AHZ1 1483 aa26.09■■□□□ 1.77
SND1-203ENST00000463020 CERKQ8TCT0 537 aa26.08■■□□□ 1.77
SND1-203ENST00000463020 PREX1Q8TCU6 1659 aa26.08■■□□□ 1.77
SND1-203ENST00000463020 ABCA6Q8N139 1617 aa26.06■■□□□ 1.76
SND1-203ENST00000463020 CDC42BPBQ9Y5S2 1711 aa26.05■■□□□ 1.76
SND1-203ENST00000463020 STRCQ7RTU9 1775 aa26.03■■□□□ 1.76
SND1-203ENST00000463020 CHIC1Q5VXU3 224 aa26.02■■□□□ 1.76
SND1-203ENST00000463020 CDK11AQ9UQ88 783 aaPredicted RBP26.02■■□□□ 1.76
SND1-203ENST00000463020 TRAPPC8Q9Y2L5 1435 aa26.02■■□□□ 1.76
SND1-203ENST00000463020 CLIP1P30622 1438 aa25.99■■□□□ 1.75
SND1-203ENST00000463020 ABCC1P33527 1531 aa25.98■■□□□ 1.75
SND1-203ENST00000463020 PREX2Q70Z35 1606 aa25.98■■□□□ 1.75
SND1-203ENST00000463020 REREQ9P2R6 1566 aa25.98■■□□□ 1.75
SND1-203ENST00000463020 MLH3Q9UHC1 1453 aa25.97■■□□□ 1.75
SND1-203ENST00000463020 C3P01024 1663 aa25.95■■□□□ 1.74
SND1-203ENST00000463020 ITSN2Q9NZM3 1697 aa25.95■■□□□ 1.74
SND1-203ENST00000463020 MYT1LQ9UL68 1186 aa25.94■■□□□ 1.74
SND1-203ENST00000463020 UHRF1BP1Q6BDS2 1440 aa25.93■■□□□ 1.74
SND1-203ENST00000463020 CASKIN1Q8WXD9 1431 aa25.92■■□□□ 1.74
SND1-203ENST00000463020 KIDINS220Q9ULH0 1771 aa25.91■■□□□ 1.74
SND1-203ENST00000463020 AGLP35573 1532 aa25.9■■□□□ 1.74
SND1-203ENST00000463020 CDC42BPAQ5VT25 1732 aa25.89■■□□□ 1.74
SND1-203ENST00000463020 CCDC18Q5T9S5 1454 aa25.86■■□□□ 1.73
SND1-203ENST00000463020 SAMD9LQ8IVG5 1584 aa25.84■■□□□ 1.73
SND1-203ENST00000463020 SETD1BQ9UPS6 1966 aaKnown RBP25.81■■□□□ 1.72
SND1-203ENST00000463020 SYCP2Q9BX26 1530 aa25.81■■□□□ 1.72
SND1-203ENST00000463020 PTPRTO14522 1441 aa25.79■■□□□ 1.72
SND1-203ENST00000463020 FYCO1Q9BQS8 1478 aa25.79■■□□□ 1.72
SND1-203ENST00000463020 LTBP4Q8N2S1 1624 aa25.78■■□□□ 1.72
SND1-203ENST00000463020 ZNF777Q9ULD5 760 aaPredicted RBP25.78■■□□□ 1.72
SND1-203ENST00000463020 DMRT2Q9Y5R5 561 aa25.78■■□□□ 1.72
SND1-203ENST00000463020 GPATCH8Q9UKJ3 1502 aaKnown RBP25.78■■□□□ 1.72
SND1-203ENST00000463020 ILDR2Q71H61 639 aa25.76■■□□□ 1.71
SND1-203ENST00000463020 NCOA1Q15788 1441 aa25.76■■□□□ 1.71
SND1-203ENST00000463020 HNRNPMP52272 730 aaKnown RBP eCLIP25.74■■□□□ 1.712e-15■■■■□ 22
SND1-203ENST00000463020 ESF1Q9H501 851 aaKnown RBP25.72■■□□□ 1.71
SND1-203ENST00000463020 CNTLNQ9NXG0 1405 aa25.71■■□□□ 1.71
SND1-203ENST00000463020 SUPT6HQ7KZ85 1726 aaKnown RBP25.71■■□□□ 1.71
SND1-203ENST00000463020 CAMSAP1Q5T5Y3 1602 aa25.7■■□□□ 1.7
SND1-203ENST00000463020 DISP3Q9P2K9 1392 aa25.69■■□□□ 1.7
SND1-203ENST00000463020 INO80Q9ULG1 1556 aaPredicted RBP25.69■■□□□ 1.7
SND1-203ENST00000463020 SPAG9O60271 1321 aaKnown RBP25.69■■□□□ 1.7
SND1-203ENST00000463020 MROH2AA6NES4 1674 aa25.69■■□□□ 1.7
SND1-203ENST00000463020 PLXNC1O60486 1568 aa25.69■■□□□ 1.7
SND1-203ENST00000463020 ATP7AQ04656 1500 aa25.68■■□□□ 1.7
SND1-203ENST00000463020 ZMYM3Q14202 1370 aa25.68■■□□□ 1.7
SND1-203ENST00000463020 CLTCQ00610 1675 aaKnown RBP25.67■■□□□ 1.7
SND1-203ENST00000463020 NPATQ14207 1427 aa25.66■■□□□ 1.7
SND1-203ENST00000463020 NCKAP5LQ9HCH0 1330 aa25.64■■□□□ 1.7
SND1-203ENST00000463020 A2MP01023 1474 aa25.62■■□□□ 1.69
SND1-203ENST00000463020 MYO3AQ8NEV4 1616 aa25.62■■□□□ 1.69
SND1-203ENST00000463020 KIAA1107Q9UPP5 1409 aa25.62■■□□□ 1.69
SND1-203ENST00000463020 ZNF644Q9H582 1327 aaPredicted RBP25.62■■□□□ 1.69
SND1-203ENST00000463020 CFDP1Q9UEE9 299 aaPredicted RBP25.6■■□□□ 1.69
SND1-203ENST00000463020 PTPRKQ15262 1439 aa25.6■■□□□ 1.69
SND1-203ENST00000463020 ZNF335Q9H4Z2 1342 aaPredicted RBP25.59■■□□□ 1.69
SND1-203ENST00000463020 CCNB3Q8WWL7 1395 aa25.58■■□□□ 1.69
SND1-203ENST00000463020 SPATA31D1Q6ZQQ2 1576 aa25.58■■□□□ 1.69
SND1-203ENST00000463020 ZNF142P52746 1687 aaPredicted RBP25.58■■□□□ 1.68
SND1-203ENST00000463020 TIAM1Q13009 1591 aa25.57■■□□□ 1.68
SND1-203ENST00000463020 CEP170BQ9Y4F5 1589 aaPredicted RBP25.56■■□□□ 1.68
SND1-203ENST00000463020 IQSEC2Q5JU85 1478 aa25.55■■□□□ 1.68
SND1-203ENST00000463020 PLEKHH2Q8IVE3 1493 aa25.55■■□□□ 1.68
SND1-203ENST00000463020 GGT6Q6P531 493 aa25.55■■□□□ 1.68
SND1-203ENST00000463020 MBD5Q9P267 1494 aa25.54■■□□□ 1.68
SND1-203ENST00000463020 TCOF1Q13428 1488 aaKnown RBP25.53■■□□□ 1.68
SND1-203ENST00000463020 MTUS2Q5JR59 1369 aa25.52■■□□□ 1.68
SND1-203ENST00000463020 PLA2R1Q13018 1463 aa25.5■■□□□ 1.67
SND1-203ENST00000463020 ADGBQ8N7X0 1667 aa25.49■■□□□ 1.67
SND1-203ENST00000463020 SOCS7O14512 581 aa25.49■■□□□ 1.67
SND1-203ENST00000463020 EHBP1L1Q8N3D4 1523 aa25.45■■□□□ 1.66
SND1-203ENST00000463020 DNMT1P26358 1616 aaKnown RBP25.44■■□□□ 1.66
SND1-203ENST00000463020 PKD2Q13563 968 aa25.42■■□□□ 1.66
SND1-203ENST00000463020 FBXO31Q5XUX0 539 aaPredicted RBP25.42■■□□□ 1.66
SND1-203ENST00000463020 A2ML1A8K2U0 1454 aa25.41■■□□□ 1.66
SND1-203ENST00000463020 CEP162Q5TB80 1403 aa25.41■■□□□ 1.66
SND1-203ENST00000463020 UBAP1LF5GYI3 381 aa25.41■■□□□ 1.66
SND1-203ENST00000463020 DHX29Q7Z478 1369 aaKnown RBP25.4■■□□□ 1.66
SND1-203ENST00000463020 NEURL4Q96JN8 1562 aa25.39■■□□□ 1.66
SND1-203ENST00000463020 RTEL1-TNFRSF6BF6WH68 1400 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms