RNA–Protein interactions for RNA: ENST00000462710.5

SRRM1-205, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-205ENST00000462710 YEATS2Q9ULM3 1422 aa15.34■□□□□ 0.05
SRRM1-205ENST00000462710 CERKQ8TCT0 537 aa15.33■□□□□ 0.05
SRRM1-205ENST00000462710 ARID4BQ4LE39 1312 aaPredicted RBP15.33■□□□□ 0.04
SRRM1-205ENST00000462710 SETD1BQ9UPS6 1966 aaKnown RBP15.33■□□□□ 0.04
SRRM1-205ENST00000462710 ZNF518AQ6AHZ1 1483 aa15.32■□□□□ 0.04
SRRM1-205ENST00000462710 STRCQ7RTU9 1775 aa15.32■□□□□ 0.04
SRRM1-205ENST00000462710 DMRT2Q9Y5R5 561 aa15.32■□□□□ 0.04
SRRM1-205ENST00000462710 FMN1Q68DA7 1419 aa15.31■□□□□ 0.04
SRRM1-205ENST00000462710 SCAPERQ9BY12 1400 aa15.31■□□□□ 0.04
SRRM1-205ENST00000462710 KIF14Q15058 1648 aa15.3■□□□□ 0.04
SRRM1-205ENST00000462710 MLH3Q9UHC1 1453 aa15.3■□□□□ 0.04
SRRM1-205ENST00000462710 MROH2AA6NES4 1674 aa15.3■□□□□ 0.04
SRRM1-205ENST00000462710 P3H3Q8IVL6 736 aa15.3■□□□□ 0.04
SRRM1-205ENST00000462710 DIP2CQ9Y2E4 1556 aa15.29■□□□□ 0.04
SRRM1-205ENST00000462710 EFCAB2Q5VUJ9 269 aa15.27■□□□□ 0.04
SRRM1-205ENST00000462710 TROQ12816 1431 aaPredicted RBP15.26■□□□□ 0.03
SRRM1-205ENST00000462710 CNTLNQ9NXG0 1405 aa15.26■□□□□ 0.03
SRRM1-205ENST00000462710 CDK13Q14004 1512 aaKnown RBP15.26■□□□□ 0.03
SRRM1-205ENST00000462710 PREX2Q70Z35 1606 aa15.25■□□□□ 0.03
SRRM1-205ENST00000462710 ITSN2Q9NZM3 1697 aa15.25■□□□□ 0.03
SRRM1-205ENST00000462710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.25■□□□□ 0.03
SRRM1-205ENST00000462710 HNRNPUL2Q1KMD3 747 aaKnown RBP15.25■□□□□ 0.03
SRRM1-205ENST00000462710 UHRF1BP1Q6BDS2 1440 aa15.25■□□□□ 0.03
SRRM1-205ENST00000462710 C3P01024 1663 aa15.24■□□□□ 0.03
SRRM1-205ENST00000462710 CLIP1P30622 1438 aa15.23■□□□□ 0.03
SRRM1-205ENST00000462710 CDK11AQ9UQ88 783 aaPredicted RBP15.23■□□□□ 0.03
SRRM1-205ENST00000462710 NPATQ14207 1427 aa15.22■□□□□ 0.03
SRRM1-205ENST00000462710 ABCA6Q8N139 1617 aa15.22■□□□□ 0.03
SRRM1-205ENST00000462710 ABCC1P33527 1531 aa15.22■□□□□ 0.03
SRRM1-205ENST00000462710 CDC42BPBQ9Y5S2 1711 aa15.22■□□□□ 0.03
SRRM1-205ENST00000462710 LTBP4Q8N2S1 1624 aa15.21■□□□□ 0.03
SRRM1-205ENST00000462710 ARID3CA6NKF2 412 aa15.21■□□□□ 0.03
SRRM1-205ENST00000462710 CCDC18Q5T9S5 1454 aa15.2■□□□□ 0.02
SRRM1-205ENST00000462710 ZNF142P52746 1687 aaPredicted RBP15.19■□□□□ 0.02
SRRM1-205ENST00000462710 ARHGAP35Q9NRY4 1499 aa15.19■□□□□ 0.02
SRRM1-205ENST00000462710 TRAPPC8Q9Y2L5 1435 aa15.18■□□□□ 0.02
SRRM1-205ENST00000462710 ARHGAP5Q13017 1502 aa15.18■□□□□ 0.02
SRRM1-205ENST00000462710 LRRIQ1Q96JM4 1722 aa15.18■□□□□ 0.02
SRRM1-205ENST00000462710 HSPA2P54652 639 aa15.17■□□□□ 0.02
SRRM1-205ENST00000462710 NCOA1Q15788 1441 aa15.17■□□□□ 0.02
SRRM1-205ENST00000462710 KIDINS220Q9ULH0 1771 aa15.16■□□□□ 0.02
SRRM1-205ENST00000462710 SPATA31D1Q6ZQQ2 1576 aa15.16■□□□□ 0.02
SRRM1-205ENST00000462710 FAM135AQ9P2D6 1515 aa15.15■□□□□ 0.02
SRRM1-205ENST00000462710 PLA2R1Q13018 1463 aa15.14■□□□□ 0.01
SRRM1-205ENST00000462710 SOCS7O14512 581 aa15.13■□□□□ 0.01
SRRM1-205ENST00000462710 CASKIN1Q8WXD9 1431 aa15.12■□□□□ 0.01
SRRM1-205ENST00000462710 CDC42BPAQ5VT25 1732 aa15.12■□□□□ 0.01
SRRM1-205ENST00000462710 PLXNC1O60486 1568 aa15.11■□□□□ 0.01
SRRM1-205ENST00000462710 PLEKHH2Q8IVE3 1493 aa15.11■□□□□ 0.01
SRRM1-205ENST00000462710 SAMD9LQ8IVG5 1584 aa15.1■□□□□ 0.01
SRRM1-205ENST00000462710 PPP6R1Q9UPN7 881 aa15.09■□□□□ 0.01
SRRM1-205ENST00000462710 KIAA1107Q9UPP5 1409 aa15.09■□□□□ 0.01
SRRM1-205ENST00000462710 INO80Q9ULG1 1556 aaPredicted RBP15.09■□□□□ 0.01
SRRM1-205ENST00000462710 FYCO1Q9BQS8 1478 aa15.07■□□□□ 0
SRRM1-205ENST00000462710 TCOF1Q13428 1488 aaKnown RBP15.06■□□□□ 0
SRRM1-205ENST00000462710 ADGBQ8N7X0 1667 aa15.06■□□□□ 0
SRRM1-205ENST00000462710 MYO3AQ8NEV4 1616 aa15.05■□□□□ 0
SRRM1-205ENST00000462710 MLECQ14165 292 aa15.05■□□□□ 0
SRRM1-205ENST00000462710 CAMSAP1Q5T5Y3 1602 aa15.05■□□□□ -0
SRRM1-205ENST00000462710 DISP3Q9P2K9 1392 aa15.03■□□□□ -0
SRRM1-205ENST00000462710 PKD2Q13563 968 aa15.03■□□□□ -0
SRRM1-205ENST00000462710 AFAP1Q8N556 730 aa15.03■□□□□ -0
SRRM1-205ENST00000462710 ATP7AQ04656 1500 aa15.02□□□□□ -0.01
SRRM1-205ENST00000462710 CEP170BQ9Y4F5 1589 aaPredicted RBP15.01□□□□□ -0.01
SRRM1-205ENST00000462710 CEBPAP49715 358 aaPredicted RBP15.01□□□□□ -0.01
SRRM1-205ENST00000462710 PTPRKQ15262 1439 aa15□□□□□ -0.01
SRRM1-205ENST00000462710 RTEL1-TNFRSF6BF6WH68 1400 aa14.99□□□□□ -0.01
SRRM1-205ENST00000462710 GPATCH8Q9UKJ3 1502 aaKnown RBP14.99□□□□□ -0.01
SRRM1-205ENST00000462710 CLTCQ00610 1675 aaKnown RBP14.99□□□□□ -0.01
SRRM1-205ENST00000462710 CPS1P31327 1500 aa14.98□□□□□ -0.01
SRRM1-205ENST00000462710 ESF1Q9H501 851 aaKnown RBP14.98□□□□□ -0.01
SRRM1-205ENST00000462710 SUPT6HQ7KZ85 1726 aaKnown RBP14.98□□□□□ -0.01
SRRM1-205ENST00000462710 ZMYM3Q14202 1370 aa14.98□□□□□ -0.01
SRRM1-205ENST00000462710 A2MP01023 1474 aa14.98□□□□□ -0.01
SRRM1-205ENST00000462710 ILDR2Q71H61 639 aa14.97□□□□□ -0.01
SRRM1-205ENST00000462710 A2ML1A8K2U0 1454 aa14.97□□□□□ -0.01
SRRM1-205ENST00000462710 SYCP2Q9BX26 1530 aa14.96□□□□□ -0.01
SRRM1-205ENST00000462710 POLR1AO95602 1720 aaPredicted RBP14.96□□□□□ -0.01
SRRM1-205ENST00000462710 DEPDC5O75140 1603 aa14.94□□□□□ -0.02
SRRM1-205ENST00000462710 DNMT1P26358 1616 aaKnown RBP14.93□□□□□ -0.02
SRRM1-205ENST00000462710 SPAG9O60271 1321 aaKnown RBP14.92□□□□□ -0.02
SRRM1-205ENST00000462710 UBTFP17480 764 aaKnown RBP14.91□□□□□ -0.02
SRRM1-205ENST00000462710 PLPPR3Q6T4P5 718 aa14.91□□□□□ -0.02
SRRM1-205ENST00000462710 MED14O60244 1454 aa14.89□□□□□ -0.03
SRRM1-205ENST00000462710 RANGAP1P46060 587 aaPredicted RBP14.89□□□□□ -0.03
SRRM1-205ENST00000462710 NEURL4Q96JN8 1562 aa14.89□□□□□ -0.03
SRRM1-205ENST00000462710 EHBP1L1Q8N3D4 1523 aa14.89□□□□□ -0.03
SRRM1-205ENST00000462710 PZPP20742 1482 aa14.88□□□□□ -0.03
SRRM1-205ENST00000462710 MBD5Q9P267 1494 aa14.88□□□□□ -0.03
SRRM1-205ENST00000462710 KDM5DQ9BY66 1539 aa14.88□□□□□ -0.03
SRRM1-205ENST00000462710 NLRP1Q9C000 1473 aa14.87□□□□□ -0.03
SRRM1-205ENST00000462710 TIAM1Q13009 1591 aa14.87□□□□□ -0.03
SRRM1-205ENST00000462710 ZC3H13Q5T200 1668 aaKnown RBP14.87□□□□□ -0.03
SRRM1-205ENST00000462710 SYNMO15061 1565 aa14.86□□□□□ -0.03
SRRM1-205ENST00000462710 CEP162Q5TB80 1403 aa14.86□□□□□ -0.03
SRRM1-205ENST00000462710 DHX29Q7Z478 1369 aaKnown RBP14.86□□□□□ -0.03
SRRM1-205ENST00000462710 MYT1LQ9UL68 1186 aa14.86□□□□□ -0.03
SRRM1-205ENST00000462710 ARHGEF5Q12774 1597 aa14.85□□□□□ -0.03
SRRM1-205ENST00000462710 VWDEQ8N2E2 1590 aa14.85□□□□□ -0.03
SRRM1-205ENST00000462710 MED1Q15648 1581 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms