RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 CDK13Q14004 1512 aaKnown RBP18.22■□□□□ 0.51
CBX3-205ENST00000462165 PLCH2O75038 1416 aa18.2■□□□□ 0.5
CBX3-205ENST00000462165 SCAPERQ9BY12 1400 aa18.18■□□□□ 0.5
CBX3-205ENST00000462165 HSPA2P54652 639 aa18.18■□□□□ 0.5
CBX3-205ENST00000462165 MYO5CQ9NQX4 1742 aa18.17■□□□□ 0.5
CBX3-205ENST00000462165 ARHGEF12Q9NZN5 1544 aa18.15■□□□□ 0.5
CBX3-205ENST00000462165 PLPPR3Q6T4P5 718 aa18.15■□□□□ 0.5
CBX3-205ENST00000462165 MLECQ14165 292 aa18.14■□□□□ 0.49
CBX3-205ENST00000462165 ATP10AO60312 1499 aa18.14■□□□□ 0.49
CBX3-205ENST00000462165 C9orf84Q5VXU9 1444 aa18.13■□□□□ 0.49
CBX3-205ENST00000462165 PREX1Q8TCU6 1659 aa18.12■□□□□ 0.49
CBX3-205ENST00000462165 FMN1Q68DA7 1419 aa18.12■□□□□ 0.49
CBX3-205ENST00000462165 EFCAB2Q5VUJ9 269 aa18.11■□□□□ 0.49
CBX3-205ENST00000462165 KIF14Q15058 1648 aa18.09■□□□□ 0.49
CBX3-205ENST00000462165 ARHGAP35Q9NRY4 1499 aa18.08■□□□□ 0.49
CBX3-205ENST00000462165 MSH5O43196 834 aa18.08■□□□□ 0.48
CBX3-205ENST00000462165 CERKQ8TCT0 537 aa18.08■□□□□ 0.48
CBX3-205ENST00000462165 CDK11AQ9UQ88 783 aaPredicted RBP18.08■□□□□ 0.48
CBX3-205ENST00000462165 KDM5CP41229 1560 aa18.08■□□□□ 0.48
CBX3-205ENST00000462165 ZNF518AQ6AHZ1 1483 aa18.07■□□□□ 0.48
CBX3-205ENST00000462165 ATP1B4Q9UN42 357 aaPredicted RBP18.06■□□□□ 0.48
CBX3-205ENST00000462165 TROQ12816 1431 aaPredicted RBP18.06■□□□□ 0.48
CBX3-205ENST00000462165 SETD1BQ9UPS6 1966 aaKnown RBP18.05■□□□□ 0.48
CBX3-205ENST00000462165 LRRIQ1Q96JM4 1722 aa18.05■□□□□ 0.48
CBX3-205ENST00000462165 ARHGAP5Q13017 1502 aa18.04■□□□□ 0.48
CBX3-205ENST00000462165 UBTFP17480 764 aaKnown RBP18.04■□□□□ 0.48
CBX3-205ENST00000462165 STRCQ7RTU9 1775 aa18.03■□□□□ 0.48
CBX3-205ENST00000462165 REREQ9P2R6 1566 aa18.03■□□□□ 0.48
CBX3-205ENST00000462165 CDC42BPBQ9Y5S2 1711 aa18.03■□□□□ 0.48
CBX3-205ENST00000462165 CEBPAP49715 358 aaPredicted RBP18.02■□□□□ 0.48
CBX3-205ENST00000462165 POTEDQ86YR6 584 aa18.02■□□□□ 0.48
CBX3-205ENST00000462165 DIP2CQ9Y2E4 1556 aa18.02■□□□□ 0.48
CBX3-205ENST00000462165 CLIP1P30622 1438 aa18.01■□□□□ 0.47
CBX3-205ENST00000462165 AFAP1Q8N556 730 aa18■□□□□ 0.47
CBX3-205ENST00000462165 UHRF1BP1Q6BDS2 1440 aa17.99■□□□□ 0.47
CBX3-205ENST00000462165 ABCA6Q8N139 1617 aa17.99■□□□□ 0.47
CBX3-205ENST00000462165 EHMT2Q96KQ7 1210 aa17.99■□□□□ 0.47
CBX3-205ENST00000462165 MLH3Q9UHC1 1453 aa17.98■□□□□ 0.47
CBX3-205ENST00000462165 PREX2Q70Z35 1606 aa17.98■□□□□ 0.47
CBX3-205ENST00000462165 C3P01024 1663 aa17.97■□□□□ 0.47
CBX3-205ENST00000462165 DMRT2Q9Y5R5 561 aa17.97■□□□□ 0.47
CBX3-205ENST00000462165 AGLP35573 1532 aa17.96■□□□□ 0.47
CBX3-205ENST00000462165 ITSN2Q9NZM3 1697 aa17.96■□□□□ 0.47
CBX3-205ENST00000462165 ABCC1P33527 1531 aa17.95■□□□□ 0.46
CBX3-205ENST00000462165 MYT1LQ9UL68 1186 aa17.95■□□□□ 0.46
CBX3-205ENST00000462165 PIAS4Q8N2W9 510 aaPredicted RBP17.94■□□□□ 0.46
CBX3-205ENST00000462165 KIDINS220Q9ULH0 1771 aa17.92■□□□□ 0.46
CBX3-205ENST00000462165 TRAPPC8Q9Y2L5 1435 aa17.92■□□□□ 0.46
CBX3-205ENST00000462165 PPP6R1Q9UPN7 881 aa17.92■□□□□ 0.46
CBX3-205ENST00000462165 CCDC18Q5T9S5 1454 aa17.92■□□□□ 0.46
CBX3-205ENST00000462165 CDC42BPAQ5VT25 1732 aa17.92■□□□□ 0.46
CBX3-205ENST00000462165 PTPRTO14522 1441 aa17.9■□□□□ 0.46
CBX3-205ENST00000462165 CASKIN1Q8WXD9 1431 aa17.89■□□□□ 0.46
CBX3-205ENST00000462165 ESF1Q9H501 851 aaKnown RBP17.87■□□□□ 0.45
CBX3-205ENST00000462165 CNTLNQ9NXG0 1405 aa17.87■□□□□ 0.45
CBX3-205ENST00000462165 MROH2AA6NES4 1674 aa17.86■□□□□ 0.45
CBX3-205ENST00000462165 SAMD9LQ8IVG5 1584 aa17.84■□□□□ 0.45
CBX3-205ENST00000462165 LTBP4Q8N2S1 1624 aa17.83■□□□□ 0.45
CBX3-205ENST00000462165 NCOA1Q15788 1441 aa17.82■□□□□ 0.44
CBX3-205ENST00000462165 ADRA2BP18089 450 aa17.82■□□□□ 0.44
CBX3-205ENST00000462165 FYCO1Q9BQS8 1478 aa17.82■□□□□ 0.44
CBX3-205ENST00000462165 DISP3Q9P2K9 1392 aa17.81■□□□□ 0.44
CBX3-205ENST00000462165 IQSEC2Q5JU85 1478 aa17.81■□□□□ 0.44
CBX3-205ENST00000462165 NPATQ14207 1427 aa17.81■□□□□ 0.44
CBX3-205ENST00000462165 SYCP2Q9BX26 1530 aa17.8■□□□□ 0.44
CBX3-205ENST00000462165 SUPT6HQ7KZ85 1726 aaKnown RBP17.8■□□□□ 0.44
CBX3-205ENST00000462165 GPATCH8Q9UKJ3 1502 aaKnown RBP17.78■□□□□ 0.44
CBX3-205ENST00000462165 ILDR2Q71H61 639 aa17.78■□□□□ 0.44
CBX3-205ENST00000462165 CAMSAP1Q5T5Y3 1602 aa17.78■□□□□ 0.44
CBX3-205ENST00000462165 ZMYM3Q14202 1370 aa17.77■□□□□ 0.43
CBX3-205ENST00000462165 PLXNC1O60486 1568 aa17.76■□□□□ 0.43
CBX3-205ENST00000462165 ZNF777Q9ULD5 760 aaPredicted RBP17.76■□□□□ 0.43
CBX3-205ENST00000462165 CLTCQ00610 1675 aaKnown RBP17.76■□□□□ 0.43
CBX3-205ENST00000462165 ATP7AQ04656 1500 aa17.76■□□□□ 0.43
CBX3-205ENST00000462165 SPAG9O60271 1321 aaKnown RBP17.75■□□□□ 0.43
CBX3-205ENST00000462165 SPATA31D1Q6ZQQ2 1576 aa17.75■□□□□ 0.43
CBX3-205ENST00000462165 INO80Q9ULG1 1556 aaPredicted RBP17.75■□□□□ 0.43
CBX3-205ENST00000462165 KIAA1107Q9UPP5 1409 aa17.75■□□□□ 0.43
CBX3-205ENST00000462165 ZNF142P52746 1687 aaPredicted RBP17.75■□□□□ 0.43
CBX3-205ENST00000462165 HNRNPMP52272 730 aaKnown RBP eCLIP17.74■□□□□ 0.43
CBX3-205ENST00000462165 MYO3AQ8NEV4 1616 aa17.73■□□□□ 0.43
CBX3-205ENST00000462165 SOCS7O14512 581 aa17.73■□□□□ 0.43
CBX3-205ENST00000462165 PLEKHH2Q8IVE3 1493 aa17.73■□□□□ 0.43
CBX3-205ENST00000462165 A2MP01023 1474 aa17.71■□□□□ 0.43
CBX3-205ENST00000462165 PLA2R1Q13018 1463 aa17.7■□□□□ 0.42
CBX3-205ENST00000462165 ADGBQ8N7X0 1667 aa17.7■□□□□ 0.42
CBX3-205ENST00000462165 CFDP1Q9UEE9 299 aaPredicted RBP17.69■□□□□ 0.42
CBX3-205ENST00000462165 PTPRKQ15262 1439 aa17.69■□□□□ 0.42
CBX3-205ENST00000462165 CEP170BQ9Y4F5 1589 aaPredicted RBP17.69■□□□□ 0.42
CBX3-205ENST00000462165 NCKAP5LQ9HCH0 1330 aa17.69■□□□□ 0.42
CBX3-205ENST00000462165 CCNB3Q8WWL7 1395 aa17.67■□□□□ 0.42
CBX3-205ENST00000462165 PKD2Q13563 968 aa17.67■□□□□ 0.42
CBX3-205ENST00000462165 TCOF1Q13428 1488 aaKnown RBP17.67■□□□□ 0.42
CBX3-205ENST00000462165 GGT6Q6P531 493 aa17.65■□□□□ 0.42
CBX3-205ENST00000462165 ZNF335Q9H4Z2 1342 aaPredicted RBP17.65■□□□□ 0.42
CBX3-205ENST00000462165 MTUS2Q5JR59 1369 aa17.64■□□□□ 0.41
CBX3-205ENST00000462165 TIAM1Q13009 1591 aa17.63■□□□□ 0.41
CBX3-205ENST00000462165 RTEL1-TNFRSF6BF6WH68 1400 aa17.61■□□□□ 0.41
CBX3-205ENST00000462165 MBD5Q9P267 1494 aa17.61■□□□□ 0.41
CBX3-205ENST00000462165 DNMT1P26358 1616 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms