RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 KDM5BQ9UGL1 1544 aa18.19■□□□□ 0.5
COL4A6-204ENST00000461897 DNMT1P26358 1616 aaKnown RBP18.18■□□□□ 0.5
COL4A6-204ENST00000461897 ZNF644Q9H582 1327 aaPredicted RBP18.17■□□□□ 0.5
COL4A6-204ENST00000461897 CAMSAP2Q08AD1 1489 aa18.17■□□□□ 0.5
COL4A6-204ENST00000461897 NAIPQ13075 1403 aa18.16■□□□□ 0.5
COL4A6-204ENST00000461897 DAPK1P53355 1430 aa18.14■□□□□ 0.49
COL4A6-204ENST00000461897 CFDP1Q9UEE9 299 aaPredicted RBP18.14■□□□□ 0.49
COL4A6-204ENST00000461897 GCC2Q8IWJ2 1684 aa18.14■□□□□ 0.49
COL4A6-204ENST00000461897 TTC37Q6PGP7 1564 aa18.13■□□□□ 0.49
COL4A6-204ENST00000461897 AKNAQ7Z591 1439 aa18.13■□□□□ 0.49
COL4A6-204ENST00000461897 MIER1Q8N108 512 aa18.13■□□□□ 0.49
COL4A6-204ENST00000461897 ABCC5O15440 1437 aa18.12■□□□□ 0.49
COL4A6-204ENST00000461897 PREX2Q70Z35 1606 aa18.12■□□□□ 0.49
COL4A6-204ENST00000461897 MAPKBP1O60336 1514 aa18.11■□□□□ 0.49
COL4A6-204ENST00000461897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.11■□□□□ 0.49
COL4A6-204ENST00000461897 CDC42BPBQ9Y5S2 1711 aa18.11■□□□□ 0.49
COL4A6-204ENST00000461897 CROCC2H7BZ55 1655 aa18.1■□□□□ 0.49
COL4A6-204ENST00000461897 CHIC2Q9UKJ5 165 aa18.09■□□□□ 0.49
COL4A6-204ENST00000461897 ROCK1Q13464 1354 aa18.07■□□□□ 0.48
COL4A6-204ENST00000461897 RRP7BPQ9NSQ0 103 aa18.06■□□□□ 0.48
COL4A6-204ENST00000461897 ZNF777Q9ULD5 760 aaPredicted RBP18.06■□□□□ 0.48
COL4A6-204ENST00000461897 KDM6BO15054 1643 aa18.06■□□□□ 0.48
COL4A6-204ENST00000461897 MYO5CQ9NQX4 1742 aa18.06■□□□□ 0.48
COL4A6-204ENST00000461897 SAMD9LQ8IVG5 1584 aa18.06■□□□□ 0.48
COL4A6-204ENST00000461897 ADGBQ8N7X0 1667 aa18.04■□□□□ 0.48
COL4A6-204ENST00000461897 ADGRL2O95490 1459 aa18.01■□□□□ 0.47
COL4A6-204ENST00000461897 WDR7Q9Y4E6 1490 aa18.01■□□□□ 0.47
COL4A6-204ENST00000461897 ARHGEF5Q12774 1597 aa18.01■□□□□ 0.47
COL4A6-204ENST00000461897 ARHGAP5Q13017 1502 aa18.01■□□□□ 0.47
COL4A6-204ENST00000461897 KCNH8Q96L42 1107 aa18■□□□□ 0.47
COL4A6-204ENST00000461897 SHANK2Q9UPX8 1470 aa18■□□□□ 0.47
COL4A6-204ENST00000461897 MBD5Q9P267 1494 aa17.99■□□□□ 0.47
COL4A6-204ENST00000461897 NCOA1Q15788 1441 aa17.98■□□□□ 0.47
COL4A6-204ENST00000461897 SYCP2Q9BX26 1530 aa17.97■□□□□ 0.47
COL4A6-204ENST00000461897 PLCH2O75038 1416 aa17.96■□□□□ 0.47
COL4A6-204ENST00000461897 ASXL2Q76L83 1435 aa17.95■□□□□ 0.46
COL4A6-204ENST00000461897 C9orf84Q5VXU9 1444 aa17.95■□□□□ 0.46
COL4A6-204ENST00000461897 CCDC141Q6ZP82 1450 aa17.95■□□□□ 0.46
COL4A6-204ENST00000461897 YTHDC1Q96MU7 727 aaKnown RBP17.94■□□□□ 0.46
COL4A6-204ENST00000461897 ABCA9Q8IUA7 1624 aa17.93■□□□□ 0.46
COL4A6-204ENST00000461897 HNRNPMP52272 730 aaKnown RBP eCLIP17.93■□□□□ 0.46
COL4A6-204ENST00000461897 ARAP3Q8WWN8 1544 aa17.93■□□□□ 0.46
COL4A6-204ENST00000461897 DENND4BO75064 1496 aaPredicted RBP17.92■□□□□ 0.46
COL4A6-204ENST00000461897 ANKRD30AQ9BXX3 1397 aa17.92■□□□□ 0.46
COL4A6-204ENST00000461897 KIAA1107Q9UPP5 1409 aa17.91■□□□□ 0.46
COL4A6-204ENST00000461897 PLEKHH2Q8IVE3 1493 aa17.9■□□□□ 0.46
COL4A6-204ENST00000461897 RIMBP3CA6NJZ7 1639 aa17.9■□□□□ 0.46
COL4A6-204ENST00000461897 RIMBP3BA6NNM3 1639 aa17.9■□□□□ 0.46
COL4A6-204ENST00000461897 RIMBP3Q9UFD9 1639 aa17.9■□□□□ 0.46
COL4A6-204ENST00000461897 ABCC1P33527 1531 aa17.9■□□□□ 0.46
COL4A6-204ENST00000461897 ARHGEF12Q9NZN5 1544 aa17.9■□□□□ 0.46
COL4A6-204ENST00000461897 MAST1Q9Y2H9 1570 aa17.89■□□□□ 0.45
COL4A6-204ENST00000461897 SIN3AQ96ST3 1273 aa17.87■□□□□ 0.45
COL4A6-204ENST00000461897 TSPY4P0CV99 314 aa17.86■□□□□ 0.45
COL4A6-204ENST00000461897 TSPY10P0CW01 314 aa17.86■□□□□ 0.45
COL4A6-204ENST00000461897 RSPH4AQ5TD94 716 aa17.86■□□□□ 0.45
COL4A6-204ENST00000461897 NPM1P06748 294 aaKnown RBP eCLIP17.86■□□□□ 0.45
COL4A6-204ENST00000461897 EFCAB2Q5VUJ9 269 aa17.86■□□□□ 0.45
COL4A6-204ENST00000461897 TRIM52Q96A61 297 aa17.86■□□□□ 0.45
COL4A6-204ENST00000461897 ANKRD50Q9ULJ7 1429 aa17.85■□□□□ 0.45
COL4A6-204ENST00000461897 KIF15Q9NS87 1388 aa17.84■□□□□ 0.45
COL4A6-204ENST00000461897 PLXNC1O60486 1568 aa17.82■□□□□ 0.44
COL4A6-204ENST00000461897 FANCAO15360 1455 aa17.82■□□□□ 0.44
COL4A6-204ENST00000461897 MPHOSPH9Q99550 1183 aa17.82■□□□□ 0.44
COL4A6-204ENST00000461897 PZPP20742 1482 aa17.81■□□□□ 0.44
COL4A6-204ENST00000461897 TRAPPC8Q9Y2L5 1435 aa17.8■□□□□ 0.44
COL4A6-204ENST00000461897 TIMELESSQ9UNS1 1208 aa17.79■□□□□ 0.44
COL4A6-204ENST00000461897 CYB5RLQ6IPT4 315 aa17.78■□□□□ 0.44
COL4A6-204ENST00000461897 KDM5DQ9BY66 1539 aa17.76■□□□□ 0.43
COL4A6-204ENST00000461897 ZFYVE16Q7Z3T8 1539 aa17.74■□□□□ 0.43
COL4A6-204ENST00000461897 ADGRL1O94910 1474 aa17.74■□□□□ 0.43
COL4A6-204ENST00000461897 FOXD1Q16676 465 aa17.73■□□□□ 0.43
COL4A6-204ENST00000461897 SLC4A1APQ9BWU0 796 aaKnown RBP17.73■□□□□ 0.43
COL4A6-204ENST00000461897 CD109Q6YHK3 1445 aa17.72■□□□□ 0.43
COL4A6-204ENST00000461897 DUOX2Q9NRD8 1548 aa17.72■□□□□ 0.43
COL4A6-204ENST00000461897 INO80Q9ULG1 1556 aaPredicted RBP17.72■□□□□ 0.43
COL4A6-204ENST00000461897 ANKRD30BQ9BXX2 1392 aa17.72■□□□□ 0.43
COL4A6-204ENST00000461897 UNC13BO14795 1591 aa17.71■□□□□ 0.43
COL4A6-204ENST00000461897 CFAP74Q9C0B2 1584 aa17.71■□□□□ 0.43
COL4A6-204ENST00000461897 TONSLQ96HA7 1378 aa17.71■□□□□ 0.43
COL4A6-204ENST00000461897 RTEL1-TNFRSF6BF6WH68 1400 aa17.71■□□□□ 0.42
COL4A6-204ENST00000461897 SCAPERQ9BY12 1400 aa17.71■□□□□ 0.42
COL4A6-204ENST00000461897 AFAP1Q8N556 730 aa17.7■□□□□ 0.42
COL4A6-204ENST00000461897 NUP155O75694 1391 aa17.7■□□□□ 0.42
COL4A6-204ENST00000461897 MYT1Q01538 1121 aa17.69■□□□□ 0.42
COL4A6-204ENST00000461897 ERBINQ96RT1 1412 aa17.69■□□□□ 0.42
COL4A6-204ENST00000461897 ATP7AQ04656 1500 aa17.68■□□□□ 0.42
COL4A6-204ENST00000461897 SPAG9O60271 1321 aaKnown RBP17.68■□□□□ 0.42
COL4A6-204ENST00000461897 MAP3K4Q9Y6R4 1608 aa17.68■□□□□ 0.42
COL4A6-204ENST00000461897 PPP1R15AO75807 674 aaPredicted RBP17.67■□□□□ 0.42
COL4A6-204ENST00000461897 FAM135AQ9P2D6 1515 aa17.66■□□□□ 0.42
COL4A6-204ENST00000461897 RPRD2Q5VT52 1461 aaKnown RBP17.66■□□□□ 0.42
COL4A6-204ENST00000461897 MAGI2Q86UL8 1455 aa17.66■□□□□ 0.42
COL4A6-204ENST00000461897 GLI2P10070 1586 aa17.65■□□□□ 0.42
COL4A6-204ENST00000461897 ZNF518AQ6AHZ1 1483 aa17.64■□□□□ 0.41
COL4A6-204ENST00000461897 PKD2Q13563 968 aa17.64■□□□□ 0.41
COL4A6-204ENST00000461897 IQGAP3Q86VI3 1631 aa17.64■□□□□ 0.41
COL4A6-204ENST00000461897 DIP2BQ9P265 1576 aa17.63■□□□□ 0.41
COL4A6-204ENST00000461897 KIDINS220Q9ULH0 1771 aa17.63■□□□□ 0.41
COL4A6-204ENST00000461897 KDM5CP41229 1560 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms